Maylandia zebra (zebra mbuna): 101478640
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Entry
101478640 CDS
T02814
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mze01009
]
101478640 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101478640 (hdac6)
04131 Membrane trafficking [BR:
mze04131
]
101478640 (hdac6)
03036 Chromosome and associated proteins [BR:
mze03036
]
101478640 (hdac6)
Enzymes [BR:
mze01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101478640 (hdac6)
Protein phosphatases and associated proteins [BR:
mze01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101478640 (hdac6)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101478640 (hdac6)
Membrane trafficking [BR:
mze04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
101478640 (hdac6)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
101478640 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
DUF3515
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
101478640
NCBI-ProteinID:
XP_004568222
LinkDB
All DBs
Position
LG20:26077977..26094481
Genome browser
AA seq
1104 aa
AA seq
DB search
MQSGSDPPGHGPKPVRRSPRLSPQVGSSEGTQENKGGNSLQELKRRGRMERTREEREEEL
SGKLKTLDLSSRSAASGTGLVYSEIFTHHKNEWDPSHPESPDRVTAIMKELERQDLLPLC
IRVEPREATEEELLLAHMKHYVDLIKSTQTMTLAELQTLSNKYDSIYLHPESFQVSVTAV
GAVLQLVDRVMTSELKNGFAIIRPPGHHAQANECNGYSIFNNVAIAARYAQTRHAISRVL
IVDWDVHHGQGIQYRFQEDPSVLYFSVHRYEQGSFWPHLPESDSHFVGSGPAEGRNINLP
WNQTGMTDADYIAAFQQVLLPVAYEFQPQLVLVSAGFDAAVGDLKGEMCVSPQCFQVLTH
MLMSLAEGRLVLALEGGYNYESSAESAAACIRALLGGPCPPLTTPTAPSDSALQSISQTI
SALYPHWASLQVLEGSPSAEGRAISTSSNQKNTMKPNLAPSVATTTGLVYDERMMEHSNL
WDRHHPEQPQRIFKIFSKHQQLGLVDRCQRIPVRLATEEELSLCHSMQHIEQMKATAMMK
PRELHKLGDEFVSIYLNQQSFQCAQLAAGSCLNALDQILCGQVTNAVAIVRPPGHHAERD
YPCGFCLFNTAALAARYAKKASHDPLMRILILDWDVHHGNGTQHMFEDDGSVLYISLHRY
DNGAFFPSSEDAAPDKVGVAKGAGFNVNVAWSGGRMGDSDYLAAFHRVVMPIATEFNPSL
VLVSAGFDAARGDPLGGYNVTPEGYAHLTHMLMSLAGGRVLVILEGGYNLSTISDSMAMC
TSMLLGDPPPALVTPLPPPHHSAVATINEVIRYHVPYWRSLRIDVPESVRAALPTLKHRG
KRSSKGKGRKSEQGSNDKPPVPPARPDDSTTVSSLEQLTQGLASLDIGQTSANQNPASSP
VGGARPKVPLSSEKPTCEEVKKESDDSTPACSESADSMSCQPVGVATPESVAGVDKVEAG
AGAEPEPEGACGWSKPQTSLELMCGADADGSTLYVVDPLSWCPHLDAVKPLPSSGIDVFR
PCQDCGSEAENWICLTCYQVFCGRYVNEHMVNHGVVSEHPLVLSFCDLSAWCYLCEAYVH
NQILFEAKNAAHCGKFGEEIPPWS
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggggtcagatcctccagggcatggaccgaagccagttagaagatctcctcgt
ctgtcccctcaggtcggcagcagtgagggaacacaggagaacaaaggaggaaacagcctg
caggagctgaagaggagaggaaggatggagaggaccagagaggagcgagaagaggagctg
agtggcaaattgaagacactggatctgtccagcagatcagcagccagtggaacgggtctc
gtttactcggagatcttcacccaccataagaacgagtgggacccgagccatccagagagt
ccggacagagtgacagccatcatgaaggagctggagagacaagatctgctgcctctctgt
atcagagttgagcccagagaagctacagaggaagagctgctgctggctcacatgaaacac
tatgtggacctgataaagtcgactcagacgatgacactggctgaactccaaactctgtcc
aacaaatatgattccatttatctccatccagagtccttccaggtgtctgtgacagctgtg
ggtgcagtgcttcagctggtcgatcgggtcatgacctctgaactcaagaacggattcgcc
atcatcagacctccaggtcatcacgctcaggccaacgagtgcaacggttactctatcttc
aacaacgtggcgatcgcagctcgatacgctcagaccaggcacgccatcagcagggtgctg
atagtggactgggatgtacatcacgggcagggcatccagtaccggttccaggaggatccc
agtgttctgtacttcagcgtccacaggtatgagcagggctctttctggcctcacctgcca
gaatccgacagccattttgttggcagcggaccagctgaaggaagaaacatcaacctgccc
tggaaccagacggggatgaccgacgctgattacatcgcggcttttcaacaagtgctgctg
cccgtcgcctacgagtttcagcctcagctggttctggtctctgctggattcgatgccgca
gttggagatctgaagggtgagatgtgtgtgagtcctcagtgtttccaggttctgactcac
atgttgatgagtttggcagaaggtcgacttgttctcgctctcgagggaggttataattat
gagtcatcagctgagagtgctgcagcctgcattcgagctctgctgggtggaccatgtcct
cctctaactacacccactgctccgtctgacagtgctctgcagtccatctctcagaccatc
tcagctctgtatccacactgggcctctctgcaagtgctggaaggcagcccgtcggctgag
ggacgtgccatcagcacatcgagcaatcagaaaaatacaatgaagcccaaccttgccccc
tctgttgccacgacaacaggtctggtttatgatgagaggatgatggagcattcgaacctg
tgggacagacatcacccggagcagcctcagcgaatctttaagatcttctccaaacatcag
caactgggattggttgatcgctgccagcggataccagttcgcttggcgacagaggaggag
ctgtccttgtgtcacagcatgcagcacatcgagcagatgaaagccacggcgatgatgaag
cccagagagctgcacaaactgggcgacgagttcgtctccatttacctcaaccagcagagc
ttccagtgtgcacagctggcggctggaagctgcctcaacgccttggaccagatcctgtgt
gggcaggtgactaacgccgtggccattgtccgtcctcctggtcatcacgctgagagagac
tatccctgtggcttctgtttattcaacacggcagctctcgctgctcgctatgccaagaaa
gcctctcatgatcccttgatgcgaatcctcatcttagactgggatgttcaccacggcaac
ggcacgcagcacatgttcgaggacgatggcagtgtcctctacatctccctccaccgctac
gacaacggtgcattctttccatcttcagaggacgctgcccccgacaaggtgggcgtggcc
aagggggcgggttttaatgtcaatgtggcatggagcggaggaaggatgggtgactcggac
tatcttgcagcttttcaccgtgtcgtcatgcctatcgccactgagtttaaccccagtctg
gttctggtgtcggccgggttcgacgcagcccggggggatcccctgggtggctacaatgtg
actccagaaggatacgcccacctcacacacatgctgatgtcactggctggggggcgggtc
ctggtcatactggagggaggttacaatttgtcaaccatctctgactccatggcgatgtgc
accagcatgttgctaggagacccccctcctgccttggtgacgcctctccctcctcctcac
cacagtgccgtggcaacaataaacgaggtcatccgataccacgtcccctactggaggtcc
ctgaggattgacgttccagagtctgtccgggcagccctgcctaccctgaagcatcgtggg
aaacgtagttctaaaggaaaaggcaggaagtcagagcagggcagcaacgacaaaccgccg
gtgccccctgcacgaccggacgactctacgacggtgagcagtctggagcagctcacacag
ggattggccagtttggacatcggtcagacctcagccaatcagaaccctgcatcctctcca
gtgggaggagctaggccaaaggtccccctgagctcagagaagccaacctgtgaagaagtg
aagaaggagtcagatgacagtacacctgcgtgcagcgaatcagcagacagtatgtcgtgt
cagcctgttggcgtggcaacaccagagtcggtcgcaggtgtagataaggttgaagccggg
gccggggcggagccagagcccgagggagcgtgtggttggtcaaagcctcagacatccctg
gaactgatgtgtggcgccgacgcagatggatcaactctgtatgtggtggaccctctctcc
tggtgtcctcacctggatgccgttaagcccctcccctcctcgggtatagacgtcttccgg
ccgtgtcaggactgcggctcagaggctgagaactggatctgtctcacttgctaccaggtg
ttctgtggtcgctatgtgaacgaacacatggtgaatcacggagtcgtgtctgaacatccc
ctggttctcagtttctgcgatctctctgcgtggtgctacctgtgtgaggcctacgtacac
aaccagattctgtttgaagctaaaaacgctgctcactgcggcaagtttggagaggagatc
cccccctggagctga
DBGET
integrated database retrieval system
