Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112416013
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Entry
112416013 CDS
T08872
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04613
Neutrophil extracellular trap formation
nasi05014
Amyotrophic lateral sclerosis
nasi05034
Alcoholism
nasi05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
112416013 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
112416013 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
112416013 (HDAC6)
09165 Substance dependence
05034 Alcoholism
112416013 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nasi01009
]
112416013 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112416013 (HDAC6)
04131 Membrane trafficking [BR:
nasi04131
]
112416013 (HDAC6)
03036 Chromosome and associated proteins [BR:
nasi03036
]
112416013 (HDAC6)
Enzymes [BR:
nasi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
112416013 (HDAC6)
Protein phosphatases and associated proteins [BR:
nasi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112416013 (HDAC6)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112416013 (HDAC6)
Membrane trafficking [BR:
nasi04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
112416013 (HDAC6)
Chromosome and associated proteins [BR:
nasi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
112416013 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
112416013
NCBI-ProteinID:
XP_024625036
UniProt:
A0A341DDP1
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MTSTGQDSTTTRQRRSRHNPHPPAHDSSVTSVRPQTSVRPQTCPDEGEGEQRAVRWTLTL
LSVWQKRGVKKGAVLRSSPNLAEVKKKGRMKKLSQAAEQDLVVGLQGLDLNREARTLSGT
GLVFDEQLNEFHCLWDDSFPEGPERLHAIKEHLIQEGLLDRCVSFQARFAEKEELMLVHS
LEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSYTCACLASGSVLRLVDAVLRAEIRNG
MAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVDWDVHHGQGTQFTFDQ
DPSVLYFSIHRYEQGRFWPHLTASNWSTTGFGEGQGYTINVPWNQVGMRDADYIAAFLHV
LLPVSLEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGY
NLRSLAEGVSASLHTLLGDPCPVLEFPGAPCPSAQASISCALEALEPFWEVFVRSAETLE
EEDTVEGDDVEKEAEGPWQPPEFPILTWPVLQARTGLVYDPQMMDHYNLWDNHHPETPQR
IKRIMHHLEELGLAGRCLALPARPATDAELLACHSAEHVDRLRATEKMKTRELHREGANY
DSIYICPSTFTCAQLAAGAACRLVEAVLAGEVLNGIAVVRPPGHHAERDAACGFCFFNSV
AVAARHAQAVSGRALRILIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDEG
ASSQIGQAAGTGFTVNVAWNGPRLGDADYLVAWHRLVLPIAYEFNPELVLVSAGFDAARG
DPLGSCQVSPEGYAHLTHLLMGLANGRIILILEGGYNLTSISESMAACTHSLLGDPPPLL
TLLRPPLSGALASISETIQVHRRYWCSLRVTKVKDKEGPSSSKLITKKAPQAANPLSAKG
MTMPEGNILEAGTGKVTSATSVKESTPGQTTSETAVMEFTQDQSSETAMGGAAALNQATS
EAATGDATLDQTTSEEAVGGAELIQSPPASCTDNQTPPASPMQGATTQISPSKLTGNLST
LELDKAQEPPEEEELLGEAAGGQDMNESVLMHVTGDHADTDQAMFYAVTPLPWCPHLVAV
CPVPEAGLDVTQPCQDCGALQENWVCLSCYQVYCSRYINAHMLQHHEGSGHPLVLSYADL
STWCYHCQAYVHHKALVAVKNIAHQNKFGENMLHSH
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaggattccaccacaaccagacagcgaaggagtaggcacaatccc
catccccccgcccacgactccagcgtcacctcggtgaggccccagacctcggtgaggccc
cagacctgccctgatgagggggagggggagcagcgggccgtgcgttggactctgaccctt
ctctctgtttggcagaagcgaggtgttaaaaagggtgccgtactccgctccagccccaat
ctagcggaggtaaagaagaaaggcagaatgaagaagcttagtcaagcagccgagcaagac
ctagtcgtggggctgcaagggctggatctgaaccgggaggccaggacactgtctggcact
ggcttggtgttcgatgagcagctaaatgaattccactgcctctgggatgacagcttccct
gaaggccctgagcggctccatgccatcaaggagcatctgatccaggagggcctcctggat
cgctgtgtgtcctttcaggcccgatttgccgaaaaggaggagctgatgttggttcacagt
ctagaatacattgatctgatggagacgacccagtacatgaatgagggggaactccgtgtc
ctagcagatacctatgactcagtttatctgcatccgaactcatacacctgcgcctgcctg
gcctcaggctccgtcctcaggctagtggatgcagtcctgagggctgagatccggaatggc
atggcgatcatcaggcctcctggacaccatgcccagcacagtctcatggacgggtattgc
atgttcaaccacgtggctgtggctgcccgctatgctcaacagaagcatgacattcagagg
gtccttatcgtggattgggatgtgcaccacggtcaaggaacacagttcacctttgaccaa
gaccccagtgtcctctatttctccatccaccgctacgagcagggtcggttctggccccac
cttacagcctccaactggtccaccacaggttttggcgaaggccagggatacaccatcaat
gtgccttggaaccaggtggggatgcgagatgccgactacatcgccgctttcctgcacgtc
ctgctgccagtttcccttgagttccagccccagctggtcctggtagctgctggatttgat
gccctccaaggggaccccaagggcgagatggccgccactccggcagggttcgcccagcta
acccacctgctcatgggtctggcaggaggcaagctgatcctctcactggagggtggctac
aacctccgctccctggctgagggcgtcagcgcctcgctccacacccttctgggagaccct
tgccccgtgctggagttccctggcgccccttgcccgagtgcccaggcgtctatctcctgt
gctctggaagcccttgagcccttctgggaggtcttcgtgagatcagctgagaccctggag
gaggaggacactgtggagggggacgatgtggagaaggaggcggagggaccatggcagccc
cctgagttcccaatcctgacgtggccggtgctgcaggctcgcacagggctggtctatgac
ccacagatgatggatcactacaacttgtgggacaaccaccaccccgagacgcctcagcgc
atcaaacgtatcatgcatcacctggaggagctgggtcttgccgggcgctgtctcgccctg
cccgcacgtccagccacggacgctgagctgctcgcctgccacagtgctgagcacgtggat
cgtctgcgggccacggagaagatgaagacccgggagctgcaccgcgagggcgccaactat
gactccatctacatctgccccagcaccttcacctgtgcgcagctggctgctggcgccgcc
tgccgcctggtggaggctgtgctggcgggagaggttttgaatggcattgctgtggtgcgt
ccccccggtcaccatgcagagcgggatgccgcttgcggtttctgcttcttcaactctgtg
gctgtggctgctcgccatgcccaggccgtcagtgggcgtgcgctgcggatcctgatcgtg
gactgggatgtccatcatggtaatggaactcagcacatatttgaggaggaccccagcgtg
ctgtacatttctctgcaccgctatgatcatggcaccttctttcctatgggggacgagggt
gccagcagccagataggtcaggctgcaggcacgggcttcaccgtcaacgtggcctggaat
gggccccgcctgggtgacgccgactacttggttgcctggcatcgtctggtgcttcccatt
gcctatgagtttaacccagaactggtgctggtctcagctggcttcgatgctgcccggggg
gacccactgggcagctgccaggtgtcgcctgagggctatgcccacctcacccacctgctg
atgggcctggccaatggccgcattatccttatcctagagggtggttataacctgacatcc
atctcggagtccatggccgcctgcacccactccctccttggggacccgccacccctgctg
accctgctgcggcccccactgtcaggggccctggcctcgatctccgagaccatccaagtc
catcgcagatactggtgcagtttgcgggtcacaaaggtcaaagataaagagggaccctcc
agttctaagttgatcaccaagaaggcaccccaggcagccaatcctttgtcagccaagggg
atgaccatgccagaagggaacattctggaggcaggcacagggaaggtcacctcagcaaca
tctgtgaaagagtccactccaggccagactacgtcagagacagctgtgatggagttcact
caggaccagtcatcagagacagccatgggaggagctgctgcgctgaaccaggccacctca
gaggcagccacaggggatgccacgctggaccagaccacctcggaggaggctgtgggggga
gctgagctgatccaaagccctccagcctcatgcactgacaatcagactcctccagcgtca
cccatgcaaggagccacaacccagatatcccccagtaaactgactggaaatctcagcacc
ttggaactagacaaggcacaggaacccccagaagaggaggagctactaggagaggcagct
ggaggtcaggacatgaatgagtcagtactgatgcatgtcactggagaccatgctgacact
gaccaagccatgttttacgctgtaacaccactgccctggtgtccccatttggtggcagta
tgccctgtacctgaagcaggcctggatgtgacccaaccttgtcaggactgtggagccctc
caggagaactgggtgtgtctgtcttgctatcaggtctactgcagtcgttacatcaatgcc
catatgctccaacaccatgaaggatcgggacacccgctggtactcagctacgccgacctg
tctacctggtgttaccactgtcaggcctacgttcaccacaaggctctcgtagctgtgaag
aacatcgcccaccagaacaagtttggggagaacatgcttcactcacactaa
DBGET
integrated database retrieval system
