Nicotiana attenuata (coyote tobacco): 109229352
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Entry
109229352 CDS
T05870
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109229352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109229352
04121 Ubiquitin system [BR:
nau04121
]
109229352
03036 Chromosome and associated proteins [BR:
nau03036
]
109229352
03400 DNA repair and recombination proteins [BR:
nau03400
]
109229352
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109229352
Ubiquitin system [BR:
nau04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
109229352
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109229352
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
109229352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
109229352
NCBI-ProteinID:
XP_019250311
UniProt:
A0A1J6JNC6
LinkDB
All DBs
Position
1:79021244..79026848
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AA seq
466 aa
AA seq
DB search
MRCIVGHEDIFRERDVKRQKKLSSGSSQMSLGSHGHIQLRCPSSEIVANSDCNMEYKNSE
SPSVGEPKSVSDQHPLKGSVCGFCHSPKTTKGTGQFLYYANGKEVVENVTSPSKVICVHS
KCIEWTPRVFYDGDTIKNLNIELARAAKLRCSSCGVKGAALGCYVKSCRRSYHVPCAFEI
QDCRWDMDNYLMLCPIHKSTKFPTEKSNSRKHVRREVHRATSDIPPLTAEQLSFWARSSG
GPKEWVLCGSALSSEEKYVLVTFANMCGATVCKFWKPNVTHVVAATDEKGACTRTFKVLM
AILSGKWILTMDWVKACIAANGPIKEELYEISLDNHGCSGGPKAGRLRASTNAPKLFDGF
KFYLSGDFVPTYKVDLLNLVEKAGGASIQSKEQLVEQTHAAQETHPLYLVVYNCDPPRGC
MFEEESVILKQRLAEAEDLAKQIGCQVIQHTWILECVAACKLVPFC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcatagttgggcatgaagatatatttcgtgaaagggatgtgaagaggcaaaag
aaactaagttctggttcgtcacaaatgagcttaggaagtcatggtcatattcaactaaga
tgtcctagttctgaaattgttgctaactccgactgcaatatggagtataaaaatagtgaa
tctccttctgtcggtgagccaaaatcagtttcagatcaacatcctctgaaaggaagtgtt
tgtggtttctgtcattcgcctaagaccacaaagggaactggacagttcttgtactatgct
aatggaaaggaagtggtggaaaatgtcacttctccttccaaagtcatatgtgtgcacagt
aaatgcattgaatggacacctcgagtattttatgatggagatactataaagaatttgaat
attgaactggcaagagctgcaaaactcagatgtagtagttgtggcgtgaaaggtgcagca
cttggctgctacgtaaaatcatgccggaggagttatcacgttccctgtgcatttgaaatc
caggattgtcgatgggatatggacaactatctcatgttgtgcccaattcataaatctact
aaatttccaactgagaagtcaaattccaggaagcacgttaggagggaagtgcatcgagcg
acttcagatattcctcctctaaccgctgagcaattgagtttttgggcaagatcatcaggt
ggacccaaagaatgggttctttgtgggtctgctctatcctcagaagagaagtatgtgttg
gtgacatttgctaatatgtgcggtgcgactgtgtgcaagttttggaaaccaaatgtcaca
catgttgttgcagcaacagatgaaaagggtgcatgcaccagaacatttaaagttctcatg
gcaattttgagtggaaaatggatcctaacgatggactgggtaaaagcttgtattgcagca
aatggtccaataaaggaagaactttatgaaataagtctagacaatcacggctgttcgggg
ggccccaaagctggaaggctcagggcctcaactaatgctccaaagctttttgatggtttc
aagttttatttgagtggggattttgtgccaacttacaaagttgacttgttaaatctagtt
gagaaggctggaggcgctagcattcagagcaaggaacagttggtggaacagactcatgct
gcacaggaaactcacccactttatctagttgtatacaactgtgatcccccacggggttgc
atgtttgaagaagaaagcgttattttgaagcaaagattagctgaagctgaggatctcgcc
aagcaaattggttgtcaggtcattcagcatacttggattctggagtgtgttgctgcatgt
aaactggtacctttttgctga
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