Nitrincola iocasae: F5I99_16280
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Entry
F5I99_16280 CDS
T06212
Name
(GenBank) M15 family metallopeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
nik
Nitrincola iocasae
Pathway
nik01502
Vancomycin resistance
nik02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F5I99_16280
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
F5I99_16280
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nik01002
]
F5I99_16280
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nik01011
]
F5I99_16280
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
nik01504
]
F5I99_16280
Enzymes [BR:
nik01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
F5I99_16280
Peptidases and inhibitors [BR:
nik01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
F5I99_16280
Peptidoglycan biosynthesis and degradation proteins [BR:
nik01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
F5I99_16280
Antimicrobial resistance genes [BR:
nik01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
F5I99_16280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
VanY
Motif
Other DBs
NCBI-ProteinID:
QEW08656
UniProt:
A0A5J6LK07
LinkDB
All DBs
Position
3522011..3522577
Genome browser
AA seq
188 aa
AA seq
DB search
MGIPGAVTDCFIREGVYRRLLAVARSLPDSYNLVILDGWRPWRVQQHLFDSLYETLHHQH
PDANEAQLVTMTREFVSIASRDPRAPSPHLTGGAVDVTLCDADGLMLNMGTRFDEVSPAS
HTDYFEQFDDGSAEQIARDRRRLLFNAMARQGFTNLPSEWWHYDFGDQLWASYTGATQAL
YGPTEFSL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ttgggaatacccggtgctgtgactgactgctttatccgtgagggtgtctatcgtcgcctg
ctggcggtagcacgttcactcccagacagctacaacctggtaattttggacggctggcgg
ccttggagagtacagcagcacctgttcgacagtctctatgaaaccttgcatcaccagcat
cctgatgccaatgaagcacaactggtcactatgacccgtgagtttgtatccatcgcaagt
cgagatccacgagcacctagtccacaccttactggtggcgctgtcgatgtcacgctttgc
gatgcggatggcttgatgctcaatatgggaacacgatttgatgaggtttcaccggcttcc
cacacggattattttgaacagtttgatgatggcagtgctgaacaaattgcgcgtgatcgt
cggcgactgttgttcaatgccatggcccggcaaggctttaccaatctgcccagtgagtgg
tggcattatgattttggtgatcaactctgggccagttacactggggccacacaggcatta
tacggacccacagagttttcgctttaa
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integrated database retrieval system
