Nomascus leucogenys (northern white-cheeked gibbon): 100600973
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Entry
100600973 CDS
T03265
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Pathway
nle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100600973 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nle03019
]
100600973 (BARD1)
04121 Ubiquitin system [BR:
nle04121
]
100600973 (BARD1)
03036 Chromosome and associated proteins [BR:
nle03036
]
100600973 (BARD1)
03400 DNA repair and recombination proteins [BR:
nle03400
]
100600973 (BARD1)
Messenger RNA biogenesis [BR:
nle03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100600973 (BARD1)
Ubiquitin system [BR:
nle04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
100600973 (BARD1)
Chromosome and associated proteins [BR:
nle03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100600973 (BARD1)
DNA repair and recombination proteins [BR:
nle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100600973 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank_2
Ank
Ank_4
Ank_3
Ank_5
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
Siva
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
100600973
NCBI-ProteinID:
XP_003254086
Ensembl:
ENSNLEG00000007205
UniProt:
G1R6G7
LinkDB
All DBs
Position
22a:complement(115240723..115324130)
Genome browser
AA seq
777 aa
AA seq
DB search
MPDNRQPRNRQPSIRSGNEPRSAPAMEPDGRGAWAHSRAALDRLEKLLRCSRCTDILRQP
VCLGGCEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDNKL
SDLKEDKPRKSLFNDAENKKNSIKMWFSPRSKKVRYVVSKASVQTQPAIKKDASAQQDSY
EFVSPSPPADVSERAKKASARSGKKQKKKTLAEINQKWNLEAEKEDGEFDSKEESKQKLV
SFCSQPSVISSPQINGEIDLLASGSLTESECFGSLTEVSLPLAEQIESPDTKSRNEVVTP
EKVCKNYLTSKTSLPLENNGKRGHHNRLSSPISKRCRTSIRSTSGDFVKQTVPSENIPLP
ECSSPPSCKRKVGGTSGRKNSNMSDEFVSLSPGTPPSTLNSSSYRRVMSSPSAMKLLPNM
AVKRNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELL
LQHKALVNTTGYQNDSPLHDAAKNGHMDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMK
SLLLLPEKNESSSTSHCSVMNTGQRRDGPLVLIGSGLSSEQQKMLSELAAILKAKKCTEF
DSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEWVKACLRRKVCEQEEKYEIPEGPHRS
RLNREQLLPKLFDGCYFYLGGTFKHHPKDNLIKLVTAGGGQILSRKPKPDSDVTQTINTV
AYHARPDSDQRFCTQYIIYEDLSNYHPERVRQGKVWKAPSSWFIDCVMSFELLPLDS
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgccggataatcggcagcctaggaaccggcagccaagtatccgctccgggaacgagcct
cgttccgcacccgccatggaaccggatggtcgcggtgcctgggcccacagtcgcgccgcg
ctcgaccgcctggagaagctgctgcgctgctcgcgttgcactgacattctgagacagcct
gtttgcttaggaggatgtgagcacatcttctgtagtaattgtgtaagtgactgcattgga
actggatgtccagtgtgttacactccggcctggatacaagacgtgaaaataaatagacaa
ctggacagcatgattcaactttgtagtaagcttcgaaatttgctacatgacaataagctc
tcagatttgaaagaagataaacctaggaaaagtttgtttaatgatgcagaaaacaagaag
aattcaattaaaatgtggtttagccctcgaagtaagaaagtcagatatgttgtgagtaaa
gcttcagtgcaaacccagcctgcaataaaaaaagatgcaagtgctcagcaagactcgtat
gaatttgtttccccaagtcctcctgcagatgtttctgagagggctaaaaaggcttctgca
agatctggaaaaaagcaaaaaaagaaaactttagctgaaatcaaccaaaaatggaattta
gaggcagaaaaagaagatggtgaatttgactccaaagaggaatctaagcaaaagctggta
tccttctgtagccaaccatccgttatctccagtcctcagataaatggtgaaatagactta
ctagcaagtggctccttgacagaatctgaatgttttggaagtttaactgaagtctcttta
ccattggctgagcaaatagagtctccagacactaagagcaggaatgaagtagtgactcct
gagaaggtctgcaaaaattatctgacatctaagacatctttgccattagaaaataatgga
aaacgtggccatcacaatagactttccagtcccatttctaagagatgtagaaccagcatt
cggagcaccagtggagattttgttaagcaaacggtgccctcagaaaatataccattgcct
gaatgttcttcaccaccttcatgcaaacgtaaagttggtggtacctcagggaggaaaaac
agtaacatgtccgatgagttcgttagtctttcaccaggtacaccaccttctacattaaat
agttcaagttacaggcgagtgatgtctagtccctcagcaatgaagctgttgcccaatatg
gctgtgaaaagaaatcatagaggagagactttgctccatattgcttctattaagggcgac
ataccttctgttgaataccttttacaaaatggaagtgatccaaatgttaaagaccatgct
ggatggacaccattgcatgaagcttgcaatcatgggcacctgaaggtagtggaattattg
ctccagcataaggcattggtgaacaccaccgggtatcaaaatgactcaccacttcacgat
gcagccaagaatgggcacatggatatagtcaaactgttactttcctatggagcctccaga
aatgctgttaacatatttggtctgcggcctgtggattatacagatgatgaaagtatgaaa
tcgctattgctgctaccagagaagaatgaatcatcctcaactagccattgctcggtaatg
aacactgggcagcgtagggatggacctcttgtacttataggcagtgggctgtcttcagaa
caacagaaaatgctcagtgagcttgcagcaattcttaaggctaaaaaatgtactgagttt
gacagtacagtaactcatgttgttgttcctggtgatgcagttcaaagtaccttgaagtgt
atgcttgggattctcaatggatgctggattctaaaatttgaatgggtaaaagcatgtctc
cgaagaaaagtatgtgaacaggaagaaaagtatgaaattcctgaaggtccacacagaagc
aggctcaacagagaacagctgttgccaaaactttttgatggatgctacttctatttgggg
ggaaccttcaaacaccatccaaaggacaaccttattaagctcgtcactgcaggtgggggc
cagatcctcagtagaaagcccaagccagacagtgacgtgactcagaccatcaatacagtc
gcataccatgcaagacccgattctgatcagcgcttctgcacacagtatatcatctatgaa
gatttgtctaattatcacccagagagggttcggcagggcaaagtctggaaggctccttcg
agctggtttatagactgtgtgatgtcctttgagttgcttcctcttgacagctga
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integrated database retrieval system
