Nanorana parkeri (Xizang Plateau frog): 108788253
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Entry
108788253 CDS
T04897
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
npr01009
]
108788253 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108788253 (HDAC6)
04131 Membrane trafficking [BR:
npr04131
]
108788253 (HDAC6)
03036 Chromosome and associated proteins [BR:
npr03036
]
108788253 (HDAC6)
Enzymes [BR:
npr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108788253 (HDAC6)
Protein phosphatases and associated proteins [BR:
npr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108788253 (HDAC6)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108788253 (HDAC6)
Membrane trafficking [BR:
npr04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108788253 (HDAC6)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
108788253 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
108788253
NCBI-ProteinID:
XP_018413494
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MASPQERKSPEARGTSPPITTTKKPGKKGTSPPQCGPTLQEVKKRGQRIRKTPEMDICDQ
LDMLRLNRDLPAAGTGLVYDDRLTLPYCLWDDKFPEGPARILAVREKLAQYGLVDRCISV
PAREASDADLLLVHSPDFVELMKSTQTMTEEELRELSDRYDSVFLHPASFTTSCLAAGSV
LQLVDKVMKGEIRNGLAVVRPPGHHSHTDKMDGYCMFNQLAIAAKYAQRNHGVKRILIVD
WDIHHGQGTQFIFEHDPSVLYFSIHRYENGEFWPHLVESSSSAVGKDRGERYNINVPWNK
IAMTDADYITAFLHLLLPISYEFQPHLVLVAAGFDSVVGDPKGEMAATPACFAHLTHLLM
SLAEGRLILSLEGGYNLRSMSEGVCASLKILLGDPCPSLSQPFAPCDSALESISGAFCVH
RKYWRSLQEQDFTLKQERKAKETSQASLADTSEDTLTDVLDATMKEVMRKMPDQRTGLVY
DERMMEHYNMWDSGHPEVPQRIARIYLRHKEMGLLDRCVRLSQCAATKEQLQMCHSLPYI
DKIEGCSRLKPRDLHRMGDEYNSIYINNKSYSSACLAAGSTFSVVEAVLTGKVQNGVCIV
RPPGHHAEPGSACGFCFFNNAALAARYAQSLQNPSEPQLRVMILDWDIHHGNGTQHIFQE
DDSVLYVSIHRYDDGLFFPSSEDAAHDKVGVGLGEGFNVNIPWNGSKMGDSEYLLAFHRI
VMPIAYEFNPQLVLISAGFDAARGDPLGGCRVSPEGYAHMTHLLMGLAGGKVVVILEGGY
NLTSISESMSMCTRTLLGDPPPRLSDLHPPRPSALRTISNVLSVHNKYWCSLRLKVELPP
PSEISKEAHWTPQNVQSSPQLTTISPGRNIETQCPQELDLTGSKADDDSLNPSPEIVEVK
SPPSVAFSNGSIDSVSSIDSCSVSFSVENNMETPSSEKSQIMYRVGESSPQKSDSVKMAK
HELKETLVDKDDVFNPLLPNLAEVEKKEELVVEMEAVGPHSVHRDSNDGESLVTVMEVQV
SNRTPDILMSARTESSVEELVSDLKLEDSKDPSTFSIREGDSEPVAGARKTIVPFLQQVA
DGAEAASVSSPDTHLEENLLSEAASGCPASCYQIDVEPSLEFSGELFTVTPLPWCPHLES
VCEMPPCGLEVTQPCVACGTDIENWVCLTCYAVLCGRYVSQHMISHGVSSGHNLVLSFSD
LSVWCYSCDAYIHNEVLIPAKQSAYYSKFGEEMPGT
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggcatctccccaggagcgaaagtctccagaagctcgaggcacgtcccctcccatcact
accacgaaaaagcctgggaagaaaggaacctcccccccccagtgtggtccaacgctgcag
gaagtaaagaagagagggcaacgaatacggaagacaccggaaatggacatttgtgaccaa
ctagatatgctgcgcctgaacagagatctacccgcagcagggactggccttgtatatgat
gaccgactgactctgccatactgtctttgggatgacaaattcccagagggtcctgcacgc
atcttggcagttagagagaagctggcacagtatggtctggtggatcgctgtatttcagta
cccgctagagaggcgtctgatgcagatctcctgcttgttcacagtccggactttgtggag
ctgatgaagtccactcaaacgatgaccgaggaagaactcagagagctgtcagatcgctac
gattctgttttcctgcaccctgcttcgttcactacatcctgcttggctgccggctctgtc
ttgcagttagttgataaagttatgaagggagagatccgcaatgggttagcagtggtcagg
cctcctggacaccactcccacactgacaaaatggacggttactgcatgtttaaccaattg
gccattgcggccaaatacgctcagcgcaatcacggggtaaagcggatactgatcgtagac
tgggacatccatcacggtcagggaacacagttcatatttgaacacgatcccagtgtgttg
tatttttccattcaccgctacgaaaatggagaattctggccccatcttgtggagtcttcc
agcagcgcagtggggaaggatcgtggggagcgatataatatcaacgtgccctggaataag
attgcaatgacagatgctgattatatcacagcatttcttcacctcctcctcccgatctct
tatgagtttcagccacatcttgtattagtagcagctggatttgactctgtggtgggagac
ccaaagggagagatggctgccactccagcatgctttgctcacctgacacacctgctcatg
tccttggctgaaggaagacttattttgtcccttgagggagggtataacttgcgctctatg
tcggaaggggtctgcgcttccctaaagattctcctcggagacccttgtccaagtttgtct
cagccctttgccccctgtgatagtgccctggaatccatctctggtgccttctgtgtccat
aggaaatattggcggagcctgcaggaacaagatttcaccttaaagcaggaaagaaaagca
aaggaaaccagtcaggcttcactggcagacacatctgaagatactctaacagatgtgctg
gatgcaacgatgaaggaagtgatgaggaagatgccggatcagcgcactggcctggtgtat
gatgagcgcatgatggaacattacaacatgtgggacagtggccaccctgaggttccacaa
agaattgcccgcatatacctacgtcataaggagatggggctgttagatcgctgcgttcgc
ctctcccaatgtgctgcaaccaaagaacagctacaaatgtgccacagtcttccctacatt
gataagatagaagggtgttcccgactgaaacccagggacctgcatagaatgggagatgag
tataactccatctacatcaacaacaagtcttacagcagtgcctgtctggctgccggctcg
acattcagtgttgtggaagctgtccttacagggaaggttcaaaatggagtctgtatcgtt
cgcccaccaggtcaccatgcagagccaggttcagcttgtggtttctgcttcttcaacaat
gccgcccttgctgcacgatatgcccagagcctgcagaacccgtctgaacctcaattaagg
gtaatgattctagactgggacatccaccacggcaacggaacacagcacattttccaggag
gatgatagtgtgctgtatgtgtccatccatcgatatgatgatggcctcttcttcccatct
tctgaggatgctgcacatgacaaggttggcgtcggtcttggagaagggttcaatgtgaac
atcccgtggaatggtagcaagatgggtgattcagagtacttgctggcctttcataggatt
gtcatgcctattgcttatgagtttaatccgcagctggttttgatatctgctggttttgac
gctgctcgtggagacccacttggaggctgccgtgtttctccggaaggctacgcccacatg
acacaccttctgatgggtctggcaggtggcaaggtggtggtcattttggagggtggctat
aatctgacctccatttcagaatccatgtcaatgtgtactcgtacacttcttggagatccc
cctcctcgcttgtctgacttgcatcctccccgtccttcagcactgcgtacaatctcaaat
gtcctaagtgtccataacaaatactggtgcagcctcaggttaaaagttgagctccctcca
ccctctgagatatcaaaggaggcacattggactccacagaacgtgcagtcatccccgcaa
ctgacaaccatctcccctggaaggaatattgaaacacagtgtccccaggaattagatttg
actggttccaaagctgatgatgatagtctgaaccccagccctgaaattgtggaggtgaaa
agtccaccgtcagtagcctttagtaacggctcaattgatagtgtctccagcatcgacagt
tgttctgtatcattctctgtagaaaacaatatggaaacaccatcatcagagaaaagtcag
atcatgtaccgtgtcggggagtcttcacctcaaaaatcagacagtgttaaaatggctaaa
catgaactgaaagagaccttggttgataaggatgatgtctttaatcccctcttgcctaac
ttagctgaagtagagaagaaggaagagttggtggtagagatggaggctgttggaccacac
tcagtgcacagggattctaatgatggagagtcgctggtaacagtaatggaagtccaggtt
tcaaaccgaacaccagacattctgatgtctgccaggacagagagctctgtggaagaactt
gtaagtgacttgaagctggaagatagcaaagacccatcaaccttcagcattagagagggt
gacagtgaacccgttgctggggctagaaagacgattgttcccttcctgcagcaagtggct
gatggtgcagaagcagcttctgtgagttctccagatactcacttggaggagaatttactc
tcagaagctgccagtggctgcccagcctcatgttaccagatagatgtggagccatcactg
gaattctctggggagttgtttacggtgacgccacttccctggtgtcctcatctggagtca
gtgtgtgagatgcccccttgcgggctggaggtgacacagccgtgcgttgcttgtggtaca
gacatagagaactgggtgtgcctgacatgttatgcggttctgtgtgggaggtatgtctct
cagcacatgatatctcatggagtctcgtccggtcacaatcttgttctcagcttctctgac
ctgtctgtctggtgttacagctgtgatgcctatatccataatgaggttctgattccagca
aaacagtcggcctactactccaagtttggcgaggaaatgccaggaacataa
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integrated database retrieval system