Notechis scutatus (mainland tiger snake): 113417758
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Entry
113417758 CDS
T09026
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nss01009
]
113417758 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113417758 (HDAC6)
04131 Membrane trafficking [BR:
nss04131
]
113417758 (HDAC6)
03036 Chromosome and associated proteins [BR:
nss03036
]
113417758 (HDAC6)
Enzymes [BR:
nss01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
113417758 (HDAC6)
Protein phosphatases and associated proteins [BR:
nss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113417758 (HDAC6)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113417758 (HDAC6)
Membrane trafficking [BR:
nss04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
113417758 (HDAC6)
Chromosome and associated proteins [BR:
nss03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
113417758 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
113417758
NCBI-ProteinID:
XP_026532086
UniProt:
A0A6J1UMG9
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MASDLGNASVLDPISVPALDIQAPLKKANKKGGLPEAKRKGRAKKMNKDAEDLLLGLQRL
DLTSECAAPLGTGLIWDNRMTEFCCPWDESFPECPERLVTIRDKLLQYELLERCVPVMGR
DISEEEILLAHSQEYLTLMKSTETMSETELRSLADTFDSVYLHPNFYRCACLAAGSVLQL
VEKVWSGELRNGLAVVRPPGHHAHCNKMNGYCMFNNIGIAAQYARQKLGVERVLIVDWDV
HHGQGLQDLFEENPSILYFSIHRYEGGNFWPHLPESDSHAVGRGRGEGYNINVPWNQTGM
RDADYLSAFLHVLLPVALEFQPHMVLVAAGFDAVIGDPKGGGDATPACFAHLTHLLKSLA
GGKLVLSLEGGYNLQSLAEGTCMVLKTLLGDPCPLMESPVFPCSSALSSVSRAVAVHSKY
WKNLRKISADVPQEDGKLSIAWPPASSLSVTDPLSGSAAERIQPQPPSCTGLVYDEKMME
HYNMWDSQHPELPQRVSRIFQRHRELHLTERCCRLPARLASEEELQMCHSLAYVETLKST
ATMKPRDLHRQGDQYNSVYICASSYQCARLAAGSAFSAVEAVLSGKTQNAVAIVRPPGHH
AESDTACGFCFFNSVALAARYAQRLAQRRLRVMILDWDVHHGNGTQHIFEDDPSVLYISL
HRYDNGTFFPTSEDADYDRVGVGPGEGFTLNVPWNCSRMGDSEYLAAFHQIIMPVSYEFN
PELVLVSAGFDAARGDPLGGCLVTPECYAHMTHLLLGLAGGKVSVVLEGGYNLDSISESM
TMCTRSLLGDPPPPLGRLKPPHLSALQSLARVTAVHRKYWASLRLEVPATLWEKPRTRAG
KETPVPNEVPEQVPQELLQSPVAQPVEAIDDAVMGLGSLQLEDNLTEEGETASSSLSPDS
SPVGEEARPKVSGSPKEMDPAENAPREGGSAESFSGEGMAPDKEHHRPMNVEVVLLDEAA
GGCSSFDEKIGDNVAGSGLFYVVTPLPWCPHLSSVLPVPPGGLNVWEPCAECGSEMENWV
CLVCYKVCCGRYINQHMLDHNKESGHPLVLSFSDLSAWCYDCQAYISHPVLLEAKCQAHK
LKFGVDMHLPS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgatttgggaaatgcctcagtattggatcccatatctgtgcctgctttggac
attcaggctccattgaaaaaggctaacaagaagggagggcttccagaggccaagcggaaa
ggacgggccaaaaagatgaacaaagatgccgaggatctgcttttgggcctgcagcgactg
gatcttacttcagaatgtgctgctccgttaggaactggactgatttgggataaccgaatg
acagaattttgctgcccatgggatgaaagtttcccagaatgcccagagcgactggtgacc
attagggacaaattgcttcagtatgaactgttggaacgttgtgtcccagtgatgggccga
gacatttctgaggaagagatcctcttggctcacagtcaagaatacttgaccctcatgaaa
tcgactgaaacaatgagtgagactgagttaaggtctctggcggacacctttgattctgtt
tacctgcatccaaatttctaccgctgtgcctgccttgctgctggttctgttttgcaactt
gtggagaaagtgtggtctggagaactccgtaatgggctggcagtggtcaggcctcctgga
caccatgcccactgcaacaagatgaatggctactgcatgttcaacaacataggcattgca
gcacaatatgcccgacaaaaattgggggtggagcgggtgctgatcgttgactgggatgtg
caccatgggcaaggccttcaagatctctttgaggagaatcccagcatcctttatttctcc
atccatcgctacgaaggagggaatttctggccccaccttccagaatctgacagtcacgca
gtgggcagaggtcggggagagggatacaacatcaacgtgccctggaaccagacaggaatg
agggatgctgactacctctctgcctttttacatgtcctgctaccggtggccttagagttc
caaccccatatggtcctggttgctgcaggttttgatgctgtaattggtgaccctaagggg
ggtggggatgccacccccgcttgctttgctcacctgacacacctgttaaagtcactggct
ggaggcaaactggttttatctctggagggtgggtataacctccagtctttggcagaggga
acctgcatggttttgaagacacttctaggagatccctgtccgctgatggaatcccctgtc
ttcccatgtagcagtgctctcagctcagtgtctcgggccgttgcagttcatagcaagtac
tggaagaacctacggaagatcagtgctgatgtgccccaagaggatggcaagctgagcata
gcttggccaccagccagctctctctctgtaaccgatcccctctccggatcagcggctgaa
cggatacagcctcagcctccttcttgcacggggctagtctatgatgagaagatgatggag
cattacaatatgtgggacagccaacatccagagttgcctcagagagtatccaggatcttc
caacgccacagggagctgcatctgaccgaaaggtgttgccggctcccagcccgtcttgcc
tctgaagaagagctacaaatgtgccacagcctggcttatgtggagacattgaagtccaca
gccaccatgaaaccccgtgacctgcatcgccagggtgaccagtacaattctgtctacatc
tgtgccagctcctaccagtgtgcccggttggcagctgggtccgcattcagtgcagtagag
gctgtgttgtctgggaagactcaaaatgccgtggccattgtccgcccgcctggacaccat
gcggaatcagatactgcctgtggcttctgcttcttcaattcggtggctttggcagcacgc
tatgcccagcgcctggcccagaggcggttgagggttatgatactagactgggatgttcac
catggcaatggaacacagcacatatttgaagatgatcccagtgttttatacatctccctc
catcggtacgacaacggcactttcttccccacttctgaggatgcagattatgaccgagtg
ggtgtgggacccggggaaggcttcacccttaatgtgccttggaactgttcccggatggga
gactctgagtatctggctgccttccatcagattatcatgcctgttagttatgagttcaac
ccggagctggtcctggtgtcggctggttttgatgctgctcgaggggacccactggggggt
tgtcttgtgaccccagaatgctacgcccatatgacccacctcctcttgggtttggcagga
gggaaagtatccgttgtcctagagggtggctacaacctagactctatctcagagtccatg
actatgtgcacacgcagcctcctgggggatcctccacccccactcggacgcctaaagcct
ccccatctgagtgccctgcagtccttggcccgtgtcactgctgtgcaccgcaaatattgg
gcaagcctccgactggaagtgcctgccactctgtgggagaagcccaggactcgggctggg
aaggaaactcccgttccaaatgaggttcctgaacaagtccctcaggagttgctccaaagc
cctgtagctcagcctgtggaagctatagatgatgccgtgatgggcttgggctccctccag
ctagaagacaacctgacggaagaaggcgaaacggcttcgagttctctctctcctgattct
agtccggtgggtgaggaagctcggccaaaagtcagcggatcccctaaggaaatggatcct
gcagagaatgcaccaagggaagggggatcggcagagagcttctctggggaagggatggct
cctgacaaagaacatcaccgcccaatgaatgttgaggttgtcctgttggatgaagcagca
gggggttgttcttcgtttgatgagaagattggggataatgtggctggcagtgggctcttt
tatgtcgtgactcccttgccctggtgcccccacctcagctccgtgctgcctgtgcctcct
gggggcctgaatgtgtgggagccttgtgcagaatgtggcagcgagatggagaactgggtt
tgtctggtgtgctataaagtctgttgtggacgctacattaatcaacatatgctggatcac
aacaaggaatctggacatccactggtgcttagcttttcagatctctctgcctggtgctat
gactgtcaagcctatatcagtcacccagtccttcttgaagccaagtgccaggctcacaag
ttgaagtttggagtggacatgcacctgccttcctaa
DBGET
integrated database retrieval system
