Nicotiana sylvestris (wood tobacco): 104233611
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Entry
104233611 CDS
T05026
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104233611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104233611
04121 Ubiquitin system [BR:
nsy04121
]
104233611
03036 Chromosome and associated proteins [BR:
nsy03036
]
104233611
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104233611
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104233611
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
104233611
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104233611
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104233611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_2
BRCT
zf-HC5HC2H
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-HC5HC2H_2
RTT107_BRCT_5
zf-RING_6
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_10
zf-RING_5
PTCB-BRCT
zf-rbx1
zf-UDP
Motif
Other DBs
NCBI-GeneID:
104233611
NCBI-ProteinID:
XP_009785338
UniProt:
A0A1U7X3B2
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MADTSHLEKMGRELKCPICLSLLNSAVSLTCNHVFCNLCIQTTMKLGSNCPVCKVPFHRR
EIRPALHMDNLVNIYKNMEVASGVNIFVTQTNPSSKVSGEDNQSNGKQTCGLPDEGKTVT
EAPATDNQKRKRGKGSKKSSECNKKNTGSNLIRPSFPTKKRVQVPQYPPLETPPPSKLAG
GNGKSITNEAQKPLVIEKDRSMLNEKGEPVLSPFFWLREEEDVERSSQQTDGDIIRDTPP
VIPCFSDIKDMDDEVHCELSPKSGTHNAANGADLFDSEMFDWTQRACSPELCSSPYKTKI
KDTECAAAQEKTRAPSLKRHSVESATQDSTVVVNVEGSDKEQLKSHSLFPLENEITGTKG
VVCKSSQSKALRCTKKKQGKKIIGEVSEFHNNLQKAAEQTMKNNQEDAYVLNSKNKDLKN
KKKGSSATNVTGSAIEDSSTSCCAKRLRKSSQPKSFDMSTLGDQKKHSEGSIETLDLKAC
HKQDQRSIGEQNKIRFRPKHRQRTAKDNITQTQDEALHLAANRLLPMDNDGEATPSGTQI
KKCELECDGKLHGKKKVKFSEDEQLAGKENITLEKIQKRVHKSLETEKSVLDVNGLVLRK
CEASHNKIQCAFCRSAEESEISGVMISYLNGKPVKEDVNGVSGVIHVHKHCAEWAPNVYF
EEDYAVNLDAELKRSRRITCFFCGVKGAALGCYETSCRKSFHVPCAKLTPECRWDYDNFV
MLCPLHANSKLPCEVPRKQSRIKESIKRSSNIHQPKVSATPDNAATSQWKSQKKNKSLVL
CSSALTADEKELVSSLKRLSGVTVVKNWDLSVTHVIASTDEKGTCRRTLKYLMGVLAGKW
ILSIDWIIACLEATEFVDEQQYEIKTDAHGIVDGPKLGRSRILNKQPKLFNGYKFFFMGD
FSPSYKSYLHDLVIAAGGIVLNRKPVAVNQEILSPGCLPPFVIYSREQLDKSEVIEKKRS
DAEALASSTGAVAASSTWILNCIAGSKLLDLE
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacttcacatcttgaaaaaatgggaagagagctcaagtgtcccatctgcttg
agtctgttgaattcggccgtttcacttacatgcaatcatgtattttgcaatttatgtatt
cagactactatgaaattagggtccaattgtccagtgtgcaaagttccttttcatcgcaga
gaaatccgacctgctctgcacatggataatttggtgaacatctataagaacatggaagtt
gcttcaggagtcaatatatttgttactcaaaccaatccgtcatccaaagtatcaggtgaa
gacaaccaatctaatggcaaacaaacttgtggactcccagatgaaggtaaaactgtaact
gaggctccagccacagataatcagaaaagaaaaagagggaaaggatcaaaaaaatcttca
gagtgcaacaaaaagaataccggatcaaatcttattagaccttcttttccgaccaaaaag
agagtgcaggtgccacaatatccacctctagagactccgccaccctcaaagttggctggt
ggaaatggtaaatccatcaccaacgaagctcagaaacctttggtgattgagaaagacagg
tctatgctaaatgaaaaaggagaaccagtactatctccattcttctggctgagagaagag
gaggatgtagaaaggtcaagtcagcaaacagatggagacattatcagggatacacctcca
gttattccatgcttcagtgatataaaggacatggatgatgaggtccactgtgaactgtct
ccaaaaagtggaactcataatgcagcaaatggagcagatctttttgacagtgagatgttc
gactggacacaaagagcttgctctcccgaactttgttcgagcccctacaagacgaagatt
aaagatactgagtgtgctgcagctcaagagaagactcgagcgccctcactaaaaaggcat
agtgtggaatcagcaactcaggacagcacagttgtggtaaatgtagagggtagtgataaa
gaacaactgaagtcacactctttatttcctcttgaaaatgaaatcactgggaccaaaggt
gttgtttgcaagtctagccagagtaaggcacttagatgcactaagaagaaacaaggcaag
aaaataattggtgaagtatcagaatttcataataacttacaaaaagcagctgaacaaaca
atgaagaacaatcaggaagatgcctatgtacttaactcaaagaacaaagatttgaaaaac
aagaaaaagggtagttctgctacaaatgtcacagggtcagcaatagaagacagttccact
tcatgttgtgctaaaagacttcgcaagagcagtcagcccaagtccttcgatatgtctact
cttggggatcagaaaaaacacagtgaaggaagcattgagacacttgacttgaaggcatgt
cataaacaggaccagagatctattggtgaacaaaataaaattcgttttagaccaaagcac
agacagagaactgctaaagataacattacacaaacccaagatgaagctttgcatttggca
gcaaatagattgcttcccatggataatgatggggaagctactccttctggtacacaaatc
aagaaatgtgagcttgagtgtgatggcaagcttcatggtaagaaaaaagtgaagttttct
gaagatgagcagcttgctggcaaggaaaatattacacttgaaaagattcagaagagagtg
cataaatcattggaaacagagaaatctgttttggacgtgaatggattggttttgcggaag
tgtgaggcaagccacaacaagatccagtgtgctttctgccgttcagcagaggaatctgag
atttcaggagtcatgataagctaccttaatggaaagcctgttaaagaagatgtcaatgga
gtatctggtgttatacatgtgcataagcattgtgcagaatgggcccctaatgtatatttt
gaagaagattatgcggtcaaccttgatgctgagctgaagaggagccggaggattacttgt
tttttctgtggagtaaagggggcagctcttgggtgttatgagacgagttgtcgcaaaagc
tttcatgttccttgtgccaagttgacaccagagtgtcgatgggattatgataactttgtt
atgttatgccctttgcatgccaactctaagctgccatgcgaggtccctcgaaaacagtcc
cggattaaagaaagtatcaaaagaagttctaatatccaccagcctaaagtctcggcaaca
cctgataatgctgctacttcgcagtggaagtctcagaagaagaataagagcttggtgctc
tgtagttcagctctaactgctgatgaaaaagagcttgtttcttcattaaagaggttgtct
ggagtgacagtagtcaagaactgggacctaagtgtcacccatgttattgcttctacagat
gagaaagggacatgccgaagaactctcaaatacttgatgggtgtcttggctgggaaatgg
atattgagcattgactggattattgcttgcttggaagccacagaatttgtcgatgagcag
caatatgagattaaaacggatgctcatggcatcgtggatggccctaagcttggaagatcg
aggattttaaacaagcaaccaaagcttttcaatggatacaagttcttttttatgggtgac
ttttcaccttcctacaagagctatctacatgaccttgttattgctgctggaggaattgtc
ctcaacaggaagcctgtagcagtgaatcaggaaattctttcacctggatgccttccacct
tttgtaatttatagtcgcgagcaacttgataagtctgaagtaatagaaaaaaaacgatcg
gatgcagaagctttggctagttccaccggagctgtagcggccagcagcacttggattctt
aactgcattgctggctccaagttgctggatctggaatag
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integrated database retrieval system
