Nicotiana tomentosiformis: 104117807
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Entry
104117807 CDS
T05025
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104117807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104117807
04121 Ubiquitin system [BR:
nto04121
]
104117807
03036 Chromosome and associated proteins [BR:
nto03036
]
104117807
03400 DNA repair and recombination proteins [BR:
nto03400
]
104117807
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104117807
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
104117807
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104117807
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104117807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
104117807
NCBI-ProteinID:
XP_009627211
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MRCIVGREDIFHERDVKRKTRLSSGSSQMSLESHGHIQLRCPSSEIVANSNCNMEHKNSE
SPSVAQPKSVSDQHALKGSVCCFCHSPKTTKGTGQFLYYANGKEVVENVSSPSKVICVHS
KCIEWTPQVFYDGDTIKNLKSELARAAKLRCRSCGMKGAALGCYVKSCRRSYHVPCAFEI
QDCRWDMDNYLMLCPIHKSTKFPTEKSKSRKHVRREVHRATSDIPPLTTEQLSFWARSSG
GPKEWVLCGSALSSEEKYMLVTFANMCGATVCKFWKPNVTHVVAATDEKGACTRTFKVLM
AILSGKWILTMDWVKACIAANGPVKEEPYEISLDNHGCSGGPKAGRLWASTNVPKLFDGF
RFYLSGDFVPTYKVDLLDLVEKAGGASIQSKEQLVEQTHAAQETHPPYLVVYNCDPPRGC
TFEEESNILQQRLAEAEDLTKQIGCQVIQHTWILECVAACKLVPFC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcatagtcgggcgtgaagatatttttcatgaaagggatgtgaagaggaaaacg
agactaagttctggttcgtcacaaatgagcttagaaagtcatggtcatattcaactaaga
tgtcctagttctgaaattgttgctaattccaactgcaatatggagcataaaaatagtgaa
tctccttctgttgctcagccaaaatcagtttcagatcaacatgctctgaaaggaagtgtt
tgttgtttctgtcattcgcctaagaccacaaagggaactggacagttcttgtactatgct
aatggaaaggaagtggtggaaaatgtctcttctccttccaaagtcatatgtgtgcacagt
aaatgcattgaatggacacctcaagtattttatgatggagatactataaagaatttgaaa
agtgaattggcaagagctgcaaaactcagatgtcgtagttgtggcatgaaaggtgcagca
cttggctgctacgtaaaatcttgccggaggagttatcacgtgccctgtgcatttgaaatc
caggattgtcgatgggatatggacaactatctcatgctgtgcccgattcataaatctact
aaatttccaactgagaagtcaaagtccaggaagcacgttaggagggaagtgcatcgggca
acttcagatattcctcctctaaccactgagcaattgagtttttgggcaagatcatcaggt
ggacccaaagaatgggttctttgtgggtctgctctatcctcagaagagaagtatatgttg
gtgacatttgctaatatgtgcggtgcgactgtgtgcaagttttggaaaccaaatgtcaca
catgttgttgcagcaacagatgaaaagggtgcatgcaccagaacatttaaagttctcatg
gcaattttgagtggaaaatggatcctaacgatggactgggtaaaagcttgtattgcagca
aatggtccagtaaaggaagaaccttatgaaataagtctagacaatcacggctgttctggg
ggccccaaagctggaaggctctgggcctcaactaatgtgccaaagctttttgatggtttc
aggttttatttgagtggggattttgtgccaacttacaaagttgacctgttagatctagtt
gagaaggctggaggtgctagcattcagagcaaggaacagttggtggaacagactcatgct
gcacaggaaactcacccaccttatctagttgtatacaactgtgatcccccacggggttgc
acgtttgaagaagaaagcaatattttgcagcaaagattagctgaagctgaggatctcacc
aagcaaattggttgtcaggtcattcagcatacttggattctggagtgtgttgctgcatgt
aaactggtacctttttgctga
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