Neogale vison (American mink): 122896394
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Entry
122896394 CDS
T08764
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04613
Neutrophil extracellular trap formation
nvs05014
Amyotrophic lateral sclerosis
nvs05034
Alcoholism
nvs05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
122896394 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
122896394 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122896394 (HDAC6)
09165 Substance dependence
05034 Alcoholism
122896394 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nvs01009
]
122896394 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122896394 (HDAC6)
04131 Membrane trafficking [BR:
nvs04131
]
122896394 (HDAC6)
03036 Chromosome and associated proteins [BR:
nvs03036
]
122896394 (HDAC6)
Enzymes [BR:
nvs01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122896394 (HDAC6)
Protein phosphatases and associated proteins [BR:
nvs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122896394 (HDAC6)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122896394 (HDAC6)
Membrane trafficking [BR:
nvs04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122896394 (HDAC6)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122896394 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
122896394
NCBI-ProteinID:
XP_044090506
LinkDB
All DBs
Position
X:complement(89240568..89260922)
Genome browser
AA seq
1160 aa
AA seq
DB search
MTSTGQDTTTTRQRRSRHNPQSPPHDSSVTSKRGVKKGALLHSSPSLAEVKKKGRMKKLT
QATEQDLIVGLQGLDLNLEAKTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGNEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQK
KHAVQRVLIVDWDVHHGQGTQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTVGFGRG
QGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPILESPGAPCPSA
QTSLSCALEALEPFWEVLVRSAEALEEDFLEEENAEKEEDGPWQPPALAIPTWPVLQART
GLVYDQRMMGHYNLWDNHHPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAELLTCHS
AEYVGRLRATAKMKTRELHREGSNFDSIYICPGTFACAQLATGAACRLVEAVLAGEVLNG
AAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFE
EDPSVLYISLHRYDHGTFFPMGDEGASCQTGRAAGTGFTVNVAWNGPRVGDADYLAAWHR
LVLPVAYEFKPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEGG
YNLTSISESMAACTRSLLGDPPPLLTLSRPPLSGALASITETTHIHRRYWRSLRVMKVED
KEGPSSSKLITKKVTQPANRGSGVGMTAPDGNIPDTDAGKPTSASPVAACTPDQAKSETT
VVEFSQDQTSETPTGEDTADQTPSEAATGEAAVDQTPSEAATEGATPDQTPSEEAVGGAE
MIQTPPALCTDNQTPPASPVQGATTQISPSKLTENLRTLDLNSEAQEAADSQIPEDERLL
GEAAGGQDRDASGLTQSFGEHADADQVVLYAVTPLPWCPHLEAVRPVPESGLNVTQPCRD
CGTLQENWVCLSCYQVYCGRYVGAHMLQHHEVSGHPLVLSYIDLSTWCYNCEAYVHHQAL
LDVKNAAHQNKFGECIPHSL
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaggataccaccacaaccaggcagcgaaggagtaggcataacccc
caatcgcccccccacgactccagcgtcacgtcgaagcgaggtgttaagaagggtgcctta
ctccactccagtcctagtctggcagaggtaaagaagaaaggcagaatgaagaagctcacc
caagccacagagcaagacctaatcgtgggcctgcaagggctggatctgaaccttgaggcc
aagacactgtctggcaccggcttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaaggccctgagcggctccatgccatcaaggaacagctgatc
caggagggccttctggaccgctgcgtgtccttccaggctcgttttgctgaaaaggaggag
ctgatgttggttcacagcctagaatacatcgatctgatggagacaacccagtacatgaat
gagggagagctccgcatcctagcagacacctatgactcagtttacctgcatccgaactca
tatacctgtgcctgtctggcctcaggctctgtcctcaggctggtggatgcggtcctgggg
aacgagatccggaatggcatggccatcatcaggcctcccggacaccatgcccagcatagt
cttatggatggatattgcatgttcaaccatgtggccgtggctgcccgctacgctcaaaag
aagcacgccgttcagagggtccttatcgtggactgggacgtgcaccatggtcaaggaaca
cagtttgcctttgaccaggaccccagcgtcctctatttttccatccaccgctacgagcag
ggtcggttctggccccatctgaaggcctctaactggtccaccgtaggttttggccgaggc
cagggatataccatcaatgtgccttggaaccaggtggggatgcgagatgccgactacatt
gctgctttcctgcacctccttctgccagtcgcccttgagttccagccccagctggtcctg
gtggccgctggatttgatgccctccaaggggaccccaagggtgagatggccgccactccg
gcagggtttgctcagctaacccacctgctcatgggtctggcaggaggcaagctgatcctg
tctctggagggtggctacaacctccgttccctggctgagggcgtcagtgcctccctccac
acccttctgggagacccttgccccatactggagtctcctggtgccccctgcccaagtgcc
cagacgtccctgtcctgtgctctggaagccctggagcccttctgggaggtcctcgtaaga
tcagctgaggccctggaggaggactttctggaggaagagaacgcggagaaggaagaagac
ggaccatggcagcctccagcgctcgcaatcccgacgtggcccgtgctacaggctcgcacg
gggctggtctatgaccagcggatgatgggtcactacaacttgtgggacaaccaccaccca
gagatgcctcagcgagtctttcggatcatgcgccgtttggaagaactgggccttgcgggg
cgctgccttacgttgcccactcgtcccgccacagacgcagaactgctcacctgccacagt
gctgagtacgtaggtcgactgcgggccacagcgaagatgaaaacccgggagctgcaccgc
gagggctccaacttcgactccatttacatctgcccgggcacctttgcctgtgcgcagctg
gccactggcgccgcctgccgcctggtggaggccgtgctggccggagaggttttgaatggc
gctgctgtggtgcggcccccaggacaccatgctgagcgggatgcagcatgtggtttttgc
tttttcaactctgtggctgtggctgctcgccatgcccaagccattagtgggcatgcgctg
cggatcctcatagtggactgggacgtccatcacggtaatggcactcagcacatatttgag
gaagacccgagcgtgctgtacatctccctgcaccgctatgatcatggcaccttcttcccc
atgggggatgagggtgccagctgccagacgggccgggctgcaggcactggcttcactgtc
aatgtggcatggaatgggccccgtgtgggcgacgctgactacctggctgcttggcatcgt
ctggtgctccctgttgcctacgagtttaaaccggaactggtgctggtctcggctggcttt
gacgctgcacggggtgacccgctggggggctgccaggtgtcacccgagggctatgcccac
ctcacccacctgctgatgggccttgccaatggccgcatcatcttaatccttgagggtggc
tataacctgacatccatctcggagtccatggctgcctgcacccgttccctccttggggac
ccgccaccactgttaaccctgtcgcgtcccccactctcaggggccctggcctccatcact
gagaccacccatatccatcgcagatactggcgcagcttgcgggtcatgaaggttgaagac
aaggagggaccctccagttctaagttgatcaccaagaaggtgacccagccagccaaccgt
gggtcaggtgtggggatgactgcaccagatgggaacattccggatacagacgcagggaag
cctacctcagcatcacccgtggcagcatgcactccagaccaagctaagtcagagaccact
gtagtggagttcagccaggaccaaacctcggagactcccaccggggaagacaccgcagac
cagaccccctcagaggcagccacaggagaggctgcagtggaccagactccttcagaggca
gccacggaaggagccacaccagaccagaccccctcagaggaagctgtggggggagctgag
atgatccaaacccctccagccttatgtactgacaaccagactcctccagcctcccctgtg
caaggagcgacaacccaaatatcccccagtaagctgacagagaatctcaggaccttggac
ctaaacagcgaggctcaggaggcagcagactctcagatcccggaagacgagaggctgcta
ggagaggcagcaggaggtcaggacagggatgcttccgggctgactcagagctttggggag
catgctgacgctgaccaggtcgtgctttatgccgtgacaccactaccctggtgtccccat
ttggaggcagtacgtcctgtccctgaatcgggcctgaacgtgacccagccttgtcgggac
tgtggaacccttcaggagaactgggtgtgtctgtcttgctatcaggtctactgtggccgt
tacgtcggtgcccatatgctccaacaccatgaagtctcaggacacccgctggtcctcagc
tacatcgacctgtctacctggtgttacaactgtgaggcctatgtccaccaccaggctctc
ctggatgtgaagaatgctgctcaccagaacaagtttggggagtgcatacctcactcactc
taa
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integrated database retrieval system
