Neogale vison (American mink): 122902275
Help
Entry
122902275 CDS
T08764
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122902275 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122902275 (BARD1)
04121 Ubiquitin system [BR:
nvs04121
]
122902275 (BARD1)
03036 Chromosome and associated proteins [BR:
nvs03036
]
122902275 (BARD1)
03400 DNA repair and recombination proteins [BR:
nvs03400
]
122902275 (BARD1)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
122902275 (BARD1)
Ubiquitin system [BR:
nvs04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
122902275 (BARD1)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122902275 (BARD1)
DNA repair and recombination proteins [BR:
nvs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
122902275 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
122902275
NCBI-ProteinID:
XP_044097477
LinkDB
All DBs
Position
3:complement(25417726..25497575)
Genome browser
AA seq
768 aa
AA seq
DB search
MPGNRQLRVRSGNEPGPAPSMEPEGRGAWAHSRAALDRLEKLLRCSRCTHILREPVCLGG
CEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDDKLSDLEE
DTSRGNLFNDAENKKNSIKMWFSPRSKKVRYVVSKVSVQTQPQVINDEGARQASMYEFVS
ASPPTSVSERAKKASTRSRKKQKKKTLAEINQEWNLEAEGEDGELASKEELKEKLVSFCS
QPSVIASPPTNGEIDLLASGSVAESQGCGSFTEVSLPLAEHIDSPEAEGRSEDVTPEKKR
CENPRASGPSGRRGRRSGPSSPVPKRCRSSLPGTSRQRIVLADSKPLPGCSSSPPSSKLQ
ARDTLRRKNSNASDESTSLSPGTPPSALNSPSYRRMMSSPSAAKLSPTSLLAVKRNHRGE
TLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNS
TGYQNDSPLHDAAKNGHLDIVKLLLSYGASRNAVNIFGLRPVDYADGENMKSLLLLPEKN
DSSSTRHCSVTNTGQRRDGPLVLIGSGLSSEQQKMLSELAAMLKAKKCAEFDNTVTHVIV
PGDTVQSTLKCMLGILNGCWILKFEWVKACLQRKACEREEKYEIPEGPQRSRLNKEQLLP
KLFDGCYFYFGGTFKHHPKDNLIKLVAAAGGQVLSRKPKPDSDVTQTINTVAYHARPDSD
QRFCTQYIIYEDLSNHRPERVRQGKVWMAPSSWFIDCVMSFELLPLDS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaccggcagctgagggtccgctccgggaacgagcctggtcccgcgcccagt
atggagccggaggggcgcggggcctgggcccacagccgcgccgcgctcgaccggctggag
aagctgctgcgctgctcgcgttgcactcatattctgagggagcctgtgtgtttagggggg
tgtgagcacatcttctgtagtaattgtgtaagtgactgcattggaaccggatgtccagtg
tgttacaccccagcctggatacaagatgtgaagataaatagacaattggacagcatgatc
cagctttgtagtaagcttcggaatttgctacatgacgataagctttcagatttggaagaa
gacacatctaggggaaatttatttaatgatgcagaaaataagaagaattccataaaaatg
tggttcagtcctcgaagtaagaaggtgcggtatgttgtgagtaaagtttcagtgcaaacc
cagcctcaggtgatcaacgatgagggcgctcggcaggcctccatgtacgaatttgtttct
gcaagtcccccaacaagtgtttctgagagggctaaaaaggcttctacaagatctagaaaa
aaacaaaaaaagaaaactttagctgaaatcaaccaagaatggaacttagaggcagaggga
gaagatggtgaacttgcctccaaagaggagttgaaggagaagctggtgtctttctgcagc
cagccatccgtcatcgctagtcctccgacaaatggtgagatagacttactcgccagtggc
tctgttgcggaatcgcagggttgtggcagcttcaccgaagtctctttaccgttggctgag
cacatagactctccagaagcggagggcaggagtgaagatgtgactcccgagaagaagcgc
tgtgagaatcctcgtgcgtcaggtcccagtgggcgacgtggccgtcgcagcggaccgtcc
agtcccgtccctaagcgatgcaggagcagccttcctggcaccagcagacagcgcatagtg
ctcgcagacagcaaaccgttgcctggctgctcctcctcaccaccctcgagcaaactccaa
gctcgtgacactctgaggaggaaaaacagtaatgcatcagacgagtccacgagcctctcc
ccaggtacaccaccgtccgcgctgaacagcccgagttacagacggatgatgtccagcccc
tcagcagcgaagctgtcacccactagccttctggctgtgaaaagaaatcatagaggagag
actctgcttcatattgcttcaattaagggcgacataccttctgttgagtacctcttacaa
aatggaagtgacccaaatgttaaagaccatgctggatggacaccattgcatgaagcctgc
aatcatgggcacctgaaggtagtggagttgttgctccagcataaggcattggtgaacagc
actggctatcagaatgactcaccgcttcatgatgctgccaagaacggacacttggatata
gtcaagctcttactttcctacggagcctccaggaatgctgttaacatatttggtttgcgg
cctgtggattatgcagacggtgaaaatatgaaatcactattgttgctaccagagaagaat
gactcatcatccactcgccattgctcagtaacaaacactggtcagcgtagggatggacct
cttgtgcttataggcagtgggctttcttcagaacaacaaaaaatgctcagcgagcttgca
gcaatgcttaaggctaaaaaatgtgctgaatttgacaatacagtgactcatgtcattgtt
cctggggatacagttcaaagtaccctaaaatgtatgcttgggattctcaatggatgttgg
atcttaaaatttgaatgggtgaaagcatgtctccagagaaaagcatgtgaacgggaggaa
aaatacgagattcctgaaggaccacagcgaagcaggctcaacaaggagcagctgttgcca
aagctgtttgatggatgctacttctattttgggggaaccttcaaacaccatccaaaggac
aaccttattaagcttgtcgccgcagctgggggccaggtcctcagtagaaagcccaagcca
gacagtgacgtgactcagaccatcaatacggttgcatatcacgcgagaccggactccgat
cagcgcttctgcacacagtatatcatctacgaagatttgtctaatcatcgcccagagagg
gttcggcagggcaaagtctggatggctccttccagctggtttatcgattgtgtgatgtcc
tttgagctgctccctcttgacagctga
DBGET
integrated database retrieval system
