Oreochromis aureus (blue tilapia): 116311013
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Entry
116311013 CDS
T07295
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116311013 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oau03400
]
116311013 (polb)
Enzymes [BR:
oau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116311013 (polb)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
116311013 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
116311013 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_2
Cdd1
Motif
Other DBs
NCBI-GeneID:
116311013
NCBI-ProteinID:
XP_031583853
Ensembl:
ENSOABG00000000591
LinkDB
All DBs
Position
LG12:12350297..12355937
Genome browser
AA seq
336 aa
AA seq
DB search
MSKRKAPQESLNEGITDFLVELANYEKNVNRAIHKYNAYRKAASTISKYPHKIKSGEEAK
KLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSITFLTRVTGIGPAAARKFVEEGVK
TLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMEKMETLILGELEKVDQEYIGTICGS
YRRGAASSGDIDILLTHPNYTSQTEKQPKLLHAVVDHLESIGFVTDTLSKGDTKFMGVCQ
LQQNDEDEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIR
PLGVTGMAGEPLLVDSEKDIFDYIQYKYREPKERSE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaagcgccgcaggagtccctaaatgagggaataacagactttctcgtc
gaattggccaactacgagaaaaatgtcaacagagcaatacacaaatacaatgcatacagg
aaagcagcatctacgatttctaagtaccctcacaaaatcaaaagtggtgaagaggccaag
aaactggatggtgttggagctaaaatagcagaaaagattgatgagtttctgcaaactggc
aaacttaggaaactggaaaagatccgaaacgatgacactagctcttccatcactttcctc
accagagttactggaattggacctgctgctgccaggaagtttgttgaggaaggggtgaag
actttagaagatttgaaaaagatcgagcacaagctaaaccatcatcaacagattggcctg
aagtactttgaagagtttgagaaaaggattccaagagctgaaatggaaaagatggagact
cttattcttggagagttggagaaagttgatcaagaatatattggaacaatctgtggaagc
tacaggagaggtgctgcatcgagtggtgatattgatattttgctgacccatccaaactac
acctctcagactgagaagcagccaaagctccttcatgccgtggttgatcatttggagtcc
atcgggtttgtgactgacacactgtccaaaggagacaccaagttcatgggagtctgccag
ctgcagcagaatgatgaggatgaggaggaataccttcacagacgtattgatattaggtta
attcccaaggatcagtactactgtggagttttgtattttactggcagtgacatcttcaat
aaaaatatgaggacccacgcactggagaagggcttcactctcaatgagtacactatacga
ccactgggggtcactggtatggcaggggagcctctgttggtggatagtgagaaagacatc
tttgattacatccagtacaaatacagggagccgaaggaacgcagcgagtga
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integrated database retrieval system