Oryza brachyantha (malo sina): 102701266
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Entry
102701266 CDS
T02995
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102701266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102701266
04121 Ubiquitin system [BR:
obr04121
]
102701266
03036 Chromosome and associated proteins [BR:
obr03036
]
102701266
03400 DNA repair and recombination proteins [BR:
obr03400
]
102701266
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
102701266
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
102701266
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
102701266
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
102701266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4_2
zf-HC5HC2H
zf-RING_2
zf-C3HC4
zf-RING_UBOX
RTT107_BRCT_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-RING_6
zf-HC5HC2H_2
PTCB-BRCT
zf-RING_10
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
102701266
NCBI-ProteinID:
XP_006654630
UniProt:
J3M8S1
LinkDB
All DBs
Position
5:16740441..16746599
Genome browser
AA seq
991 aa
AA seq
DB search
MADVGSLEKMGRELKCPICLSLLSSAVSISCNHIFCNDCLTESMKSASSCPVCKIPFRRR
EMRPAPHMDNLVSIFKSMEAATGINVVSTQVDPAVKVADRSECVNSGKNSKSSLKPLARK
RKVSCKKENNTKKDATASTSCPTTKPSFSTNKRIQVTPFPESETPIRTKKIMNPEELKNN
QNDHVEENKSKAVTSDQPESPSLSPFFWLREHEEEVGCTAETLSETLSLDTPLRHDAPSF
SDIKDSDDEIPFHTTPNSKPTAKEFFDSEIFEWTQRPCSPELCSTPLKKQSKAKNKLDQI
EEKGDEDIHIGGSFDQLGHAQPVNTKATKQKRKKTSASNRKIAKTLNRAERCIKKTDAND
QGLSSRRSVSLKSCQKNSVAVGRNTSGRRNKASSNSKPIHCSSDNPPESYFPKEILDVEA
PDDPLSERNQDMEKNSRRKGSARKPRMEGKTTEDTTERNCEPRSKRAKRMSDRVIAEPVE
VPSGSGNEAEVLQLHTVSKGSIQRTPANVRRKRKVCGEQKSKNELESTISDIGTMTPIVL
PGRCQSNEALCTAPSVRNASIKNKQAEFIEPDFFGIENFENLQACPARNVLLKKCEDTSL
KVSCAFCQSGVITEDSGEMVHYQNGKQVPAEFNGGVNVVHSHKNCLEWAPDVYFEDESVF
NLTTELARSRRIKCACCGIKGAALGCFEMSCRRSFHFTCAKLIPECRWDNENFVMLCPLH
RSSKLPNENPEQQKQPKRKITPKGPSQIERNQDCSNNWKWPSGSPQKWVLCCSSLSGIEK
EVVSEFAKLAGVHISANWSSNVTHVIASTDLSGACKRTLKFLMAILNGRWIVSIDWVKTC
MECMEPIDEQKFEVTTDVQGITDGPRLGRCRVIDRQPKLFDGVRFYLHGDFTKSYRGYLQ
ELVAAAGGTVLQRKPVSRDQQKLLDDSSASAVLIVYSVESKDKPKSKGETEAAAANRRQA
DAQALAFASGGRVVSSAWVIDSIAACKLQPL
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtggggagcctggagaagatgggccgagagctcaagtgccccatctgcttg
agccttctcagttcggcggtatctatctcctgcaatcacatcttctgcaacgattgcctc
acggaatcgatgaagtccgcgtcgagctgtcctgtgtgcaagatcccgttccgccgacga
gaaatgcgacctgcacctcacatggacaatctggtcagcattttcaaaagcatggaggct
gcaacagggatcaatgtggtctcaacacaggtggatcctgcggtaaaagttgcagatcga
tccgaatgtgtcaacagtgggaaaaactctaaaagttcactaaagccattggcacgaaaa
aggaaggtatcatgcaagaaggaaaataatacaaaaaaggatgctacagcctctacatcc
tgtcctactaccaagccttctttctctactaacaaaagaatacaagtgacaccattccct
gaatctgagacaccaataaggactaagaagattatgaaccccgaagagctaaaaaataat
cagaatgatcatgttgaagagaacaagagtaaagcagttacatcggatcaaccagaaagt
ccttcgttgtcaccctttttttggttaagggaacacgaagaagaagtaggctgtactgct
gagacgttaagtgaaacactatcgttagacacacccctgcgtcatgatgcaccctctttt
agtgatatcaaagactccgatgacgaaattccctttcatacaactccaaacagcaaacct
acggccaaagaattttttgatagtgaaatatttgaatggacccagagaccttgctctcct
gaactgtgttccactccattgaaaaagcagagtaaagctaagaataaacttgatcaaatt
gaagagaaaggtgatgaagatatacatattggcggttcgtttgatcagttaggtcatgct
cagcctgtcaatactaaagcaacaaagcagaagagaaagaaaacaagtgctagtaacaga
aagattgcaaagacgctgaatcgtgctgagcggtgcataaagaagactgatgccaatgac
caaggtttgagcagccgtagaagtgtttctttgaaatcatgtcagaaaaacagcgttgct
gtagggaggaatacctcaggtagaagaaacaaggcttctagcaacagcaagccaattcat
tgctccagtgataaccccccagagtcatattttcctaaggagattttggatgttgaagca
cctgacgaccccctttcagaaaggaaccaagatatggagaaaaatagtcgacgaaaggga
agtgcaaggaagccgagaatggaaggtaaaactacggaagatactacagagaggaactgt
gaaccgagaagtaagcgagccaaaagaatgtctgatcgcgttatagctgaaccggttgaa
gttccttcaggatctggaaatgaagcagaagtactgcagcttcacactgtctcaaaaggc
agcatccagcgcacaccggcaaatgttagaagaaagagaaaagtttgtggagaacagaaa
agtaagaatgaacttgagagcacaatatcagacatcggtacaatgactcctattgtttta
cctgggagatgtcaaagtaacgaggcactatgtacagctccttcagtaaggaatgcatct
attaagaacaagcaagcagaatttatcgaacctgatttttttggaatagaaaattttgaa
aatcttcaagcatgccctgcacgtaatgttttactaaagaagtgtgaggatactagtttg
aaggtttcttgtgctttctgccagtctggtgtcatcacagaggattctggtgagatggtt
cattaccaaaatggaaaacaagtgcctgcagagttcaatggaggggttaacgttgtgcat
tctcacaagaattgccttgagtgggctcctgatgtctactttgaagatgagtctgtcttc
aatcttacaactgaattggccagaagcagaaggatcaaatgtgcttgctgtggaattaaa
ggagctgcacttggatgctttgagatgagttgtcggagaagtttccacttcacctgtgct
aaactgatcccagaatgcagatgggataatgaaaactttgtgatgctatgccctctgcat
cggtcttcaaagttgcctaatgaaaatcctgaacagcaaaagcaacctaaaaggaaaata
acaccgaaaggcccatctcaaatagaacgtaatcaggattgtagtaataactggaaatgg
ccatctggatcaccacagaagtgggtgctctgctgttcatcactttctggcattgagaag
gaagttgtatcagaatttgcaaagttagccggcgtgcatatttcagcaaattggagctcc
aatgttacccatgttattgcatcaactgatctctctggtgcttgcaaacgaacactgaag
tttctcatggcaatcttgaatggcagatggatcgtctccatagactgggttaaaacttgc
atggagtgcatggagccgattgatgaacagaaatttgaggtcactactgatgttcaaggg
atcactgatggtcctaggttaggaagatgcagagtaatcgacaggcaacctaagctgttc
gatggcgtgaggttctacctccatggggacttcaccaaatcctacagaggatacctgcaa
gaacttgtggctgcagcgggtggaacagttctacagaggaagcccgtgtcaagagaccag
cagaagctgcttgatgacagctctgcctctgccgtcctcatcgtctacagcgtcgagagc
aaagacaagccaaaatccaagggcgaaaccgaggctgctgctgctaatcgcagacaggcg
gatgctcaggctctcgccttcgcctccggtggcagagttgtgagcagtgcgtgggtgatc
gactcgattgcagcctgcaagctgcaacctctttga
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