Oryza brachyantha (malo sina): 102713922
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Entry
102713922 CDS
T02995
Name
(RefSeq) histone deacetylase 15-like
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
obr01009
]
102713922
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102713922
04131 Membrane trafficking [BR:
obr04131
]
102713922
03036 Chromosome and associated proteins [BR:
obr03036
]
102713922
Enzymes [BR:
obr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102713922
Protein phosphatases and associated proteins [BR:
obr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102713922
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
102713922
Membrane trafficking [BR:
obr04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102713922
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102713922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
102713922
NCBI-ProteinID:
XP_006657469
UniProt:
J3MIS5
LinkDB
All DBs
Position
7:complement(2089090..2099181)
Genome browser
AA seq
622 aa
AA seq
DB search
MTSDMRPLNSQKGQTCGVSDQACHSKSKNDNDGKPSRAKVNGVSSLSGSHNDEKFLKENS
GACNLNSDHANSLSVDGVRVSIARSELIDNSDHDGCLHVKNESCMACDDLLQESDGEQHG
GTLEDLFSFNDEEDDDSDWEPSARLALDRWFCLNCTVPNMEDFAHCQNCNELKGSAVVGY
DAFKAHLAQAAFLSSDTALPSVSTAVGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLA
AAGIFPSKCVMVPPREITKEELLTAHTSDHIDSVEQTKNMLYSYFTSDTYANGHSACAAK
LAAGICADLASLIVSGHARNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAGAKK
VLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGSFYPGTGAAHEVGVMDGQGFSVNIP
WSRGGVGDNDYIFAFQHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMTS
MLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLGDNPIYHTGATEPSEEGIQTVLQVL
SIQQQFWPVLVPSFASVLSLQRSVFSKYTSEGNKKRKHAGGAGPFWWKWGSKRLLYEVLF
EGRCLRKIKDTCKEKSNDEAEP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgatatgagaccactcaacagccaaaagggtcagacctgtggagtttctgac
caagcttgccacagcaaaagcaaaaacgacaatgatggaaaaccatcacgtgctaaagtg
aatggagtttcctcgttgagcgggagccataatgatgagaaatttttgaaagagaactct
ggagcatgcaatttaaattctgaccatgccaattctttatcagtagatggggtcagagtt
tctatagcaaggtcagaactaattgacaattcagatcatgatggttgtctgcatgtcaag
aatgaaagctgtatggcttgtgatgatctgcttcaagagtctgacggagaacaacatggg
ggtacactggaggatctattttcctttaatgacgaggaggatgatgacagtgattgggaa
ccctctgctcgccttgctttggacaggtggttttgcttgaactgtacagtgccaaatatg
gaagattttgcacattgccagaattgcaatgagcttaaaggatctgcagtagttggatat
gatgctttcaaagctcatcttgcacaggcagcttttttatcttctgacacagcactgcca
tcggtatccacagctgtcggttttgatgaaagaatgctgctccatagtgagatagagatt
aaaccaaatccacatccagaaaggcctgaccgccttcgtgcaattgctgctagtcttgct
gccgcaggtatctttccctctaaatgtgttatggtacctcctcgagaaatcacgaaggaa
gaactcctaacagcccatacttcagatcacattgacagtgttgagcagacaaaaaacatg
ctttacagttacttcacttcggatacatatgcaaatggacactcagcatgtgctgccaaa
cttgcagcagggatatgtgctgatcttgctagcttgatagtttctgggcatgctcgtaat
ggatttgcaatggtgaggcctcctgggcatcatgctggggtgaagcaagccatgggattt
tgtcttcacaacaatgcagcagtggctgcattagctgcacaaagagctggtgccaagaaa
gtattaatagttgactgggatgtgcaccatggtaatggaacacaggagatatttgatggg
gacaattctgtcttgtacatatcactacatcgtcatgaggatggaagtttctaccctgga
actggggcagcacatgaggttggagttatggatggccaaggattctcggtcaatatacct
tggagccgtggtggtgttggagacaatgactacatatttgcttttcagcatgtggtgctt
ccgatagctgcagagtttgctccagacattaccattatatctgcaggatttgatgcagcg
aggggcgaccctctgggttgttgtgatgtcactcctgctggatactctaggatgacgtcc
atgctaactgcttgttcacagggaaagttgttggttatacttgagggaggatacaatctt
cggtctatatcctcatcagctaccgaagttgttaaggtcctacttggggataatcctatt
tatcatacaggtgcaactgaaccgtcagaggagggcatacagactgtcttacaagtcctg
agtatccagcagcaattttggccagttttagttccatcctttgcatcagttctgtcactg
cagcggtcggttttttccaaatataccagtgaaggaaacaagaaaaggaagcatgcagga
ggagcagggcctttctggtggaaatggggaagcaaaaggcttctgtacgaagtgctattt
gagggccgctgtctgcgaaagatcaaggatacatgcaaagaaaaatcgaatgatgaagca
gagccctaa
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