Oryctolagus cuniculus (rabbit): 103345620
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Entry
103345620 CDS
T03373
Name
(RefSeq) nucleolar complex protein 4 homolog isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04613
Neutrophil extracellular trap formation
ocu05014
Amyotrophic lateral sclerosis
ocu05034
Alcoholism
ocu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
103345620
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
103345620
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103345620
09165 Substance dependence
05034 Alcoholism
103345620
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocu01009
]
103345620
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
103345620
04131 Membrane trafficking [BR:
ocu04131
]
103345620
03036 Chromosome and associated proteins [BR:
ocu03036
]
103345620
Enzymes [BR:
ocu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103345620
Protein phosphatases and associated proteins [BR:
ocu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103345620
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
103345620
Membrane trafficking [BR:
ocu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103345620
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
103345620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
CBF
Motif
Other DBs
NCBI-GeneID:
103345620
NCBI-ProteinID:
XP_051693564
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MSSTGPESTTARSRRSRHNPQSSPHDSSGTPKRSVKKGALPRCSPNLLEIKKKGKMKKLS
QAAEEYLITGLQELDLDSEAKTPAGTGLVFDDQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFHARFAEKEELMLVHSLEYIDLMESTQYMKEGELRVLADTYDSVYLHPNS
YSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHGIQRVLIVDWDIHHGQGTQFMFDQDPSVLYFSIHRYEQGRFWPHLPASNWSTTGFGQG
QGYTINVPWNQVGMRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGIPCQSA
QNSLSCTLGALEPFWEFLVRSVETIEEDSMEEDSMEESEESGFWEPPVLPMLTWPVLQAR
TGLVYDQRMMSHCNLWDNHHPETPQRILRIMCHLEELGLAGRCLNLPARPATDAELLTCH
SAEYVERIRATQKMKTRELHREGANFDSIYICPSTFTCAQLATGTVCRLVEAVLASRGEA
NGVFDILAVLQAQDSEEVQEAVRACSRLFGALLERGELFVGQLPPEEVVLAGSQGATRKY
KVWMRHRYHSCCNRLAELLAHPSFQVKELALETLMKFVQLEGTHPLEKPKWEDNYLFPRE
LFKSVVRGLLSPEDDGSLLLSRFREYLEHDDIRYHAMQAATDTVARVTDQHLEVSPTFWN
NAFSLLAAVSLPPREPDVCSFYVKRAAEPSDKWKVVHLKEHRKAFQAMWLGFLKHKLPLG
LYKKVLVILHDSILPHLAQPTLMIDFLTSAYDVGGAVSLLALNGLFILIHEHNLEYPDFY
RKLYGLLEPSIFHVKYRARFFHLVDLFLSSSHLPAYLVAAFAKRLSHLALTAPPEALLMV
LPFICNLLRRHPACRVLVHRPNGPELDADPYDPTEEDPAKSRALESSLWELQTLQQHYHP
EVSKAASAINQALSVPEVSIAPLLELTAYEIFERDLKKKRPEPVPLEFLPPQGLLGRHDS
LCSQLFTLS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccactggcccggagtccaccacagccaggtcccgaaggagtaggcacaacccc
cagtcgtcccctcacgactccagcggcaccccgaaacgaagtgttaagaagggcgcttta
cctcgctgcagtcccaacctgctagagataaagaagaaaggcaaaatgaagaagctcagc
caagcagctgaagaatacctaatcacggggctgcaagagctggatctggactctgaggcc
aagacgccggctggcactggtttggtgttcgatgatcagctcaatgaattccactgcctc
tgggatgacagtttcccagaaggtcctgagcggctccatgccatcaaggagcaactgata
caggagggcctcctggatcgctgtgtatcctttcacgcgcggtttgcagaaaaggaggag
ctgatgttggttcacagcctagaatacattgatctgatggagtcgactcagtacatgaaa
gaaggggaactccgtgtcctagcagacacctatgactcagtatatctgcatccgaactca
tactcctgtgcctgcctggcttcaggttctgtcctcaggctggtggatgcagtcctgggg
gctgagatccggaatggcatggccatcatcaggcctcctggacaccacgcccagcacagt
cttatggatgggtattgcatgttcaatcacgtggctgtggctgctcgttatgctcaacag
aagcatggcatacagagggtccttattgttgactgggatatacaccacggtcaaggaaca
cagttcatgtttgaccaggaccccagtgttttatatttctccatccaccgctatgagcaa
ggtcgattctggccccatcttccagcctctaactggtccaccacaggtttcggccaaggt
caaggatataccatcaatgtgccttggaaccaggtggggatgcgggatgctgactacatt
gctgcgttcctgcacatcctgctgccagtcgcctttgagttccaacctcagctggtcctt
gtggctgctggatttgatgctctccaaggggaccccaagggcgagatggctgccactcca
gctgggttcgcccagctaacccacctgctcatgggtctggcaggaggcaagctgatcctg
tctctggagggtggctacaacctccgttccctggcggagggcgtcagtgcctcgctccat
acccttctgggagacccttgccccatgctggagtcccctggtatcccctgccaaagtgcc
cagaattcactctcctgtactttgggagcccttgagcccttctgggaattccttgtgcga
tcagttgagaccatcgaggaagacagcatggaggaggacagcatggaggagagtgaggag
tccggattctgggagcccccggtgctgcctatgctgacatggccggtgctgcaggctcgc
acagggctggtctatgaccagcggatgatgagtcactgcaacttatgggacaaccaccat
cccgagacaccccagcgtatcttgcgtatcatgtgccatctggaggagttgggccttgct
ggacgctgcctcaacctaccagcacgacctgccactgatgctgagctgctcacttgccac
agtgctgagtatgtggagcgtatccgggccacgcagaagatgaagacccgggaactacat
cgcgagggtgccaactttgactcaatctacatctgccccagcaccttcacctgtgcacag
cttgccactggcaccgtctgccgcctggtggaggctgtgctggcgagccgcggcgaggcc
aacggcgtgttcgacatcctggcggtgttgcaggcccaggacagcgaggaggtacaggaa
gcagtccgcgcgtgcagccgcctgttcggggccttgctggagcggggagagctgttcgtg
ggccagctgcccccggaggaggtggtcctggcagggtcccagggagccactcgcaagtac
aaggtgtggatgaggcaccgctaccacagctgctgcaaccgcctggcggagctcctggct
cacccttcctttcaggtcaaggagctggccctcgagacgctcatgaagtttgtgcagctg
gaaggaacgcaccccctggagaagcccaagtgggaggacaactacctgttcccccgggag
ctcttcaagtcggtggtgagaggcctgctttcgcccgaggacgacggcagcctgctgctc
tcccgcttccgagagtatctggagcacgacgacatccggtaccacgcgatgcaggccgcc
accgacacggtggcccgcgtgaccgaccagcacctggaggtgtcccccacgttctggaac
aatgccttctcgctgctggcggctgtgagcctgccccctcgggagcctgacgtgtgcagc
ttctacgtgaagcgcgcggcagagccgtcagacaagtggaaagtggttcatctgaaggag
cacaggaaggcgttccaggccatgtggctcggcttcctcaagcacaagctgcccctcggc
ctgtacaagaaggtgctggtgatcttgcacgactccatcctgccccacctggcccagccc
accctcatgatcgacttcctcaccagcgcctacgatgtcgggggtgccgtcagcctcttg
gccttgaacgggcttttcatcctgattcacgagcacaacctggaataccccgacttctac
cggaagctctatggcctcctggagccctccatcttccacgtcaagtaccgggctcgtttc
ttccacctggtcgacctcttcctgtcctcctcccaccttcccgcctacctggtggctgcc
ttcgccaagcgcctgtcccacctggccctgaccgcaccccccgaggccttgctcatggtg
ctgcccttcatctgcaacctgctgcgccgacacccggcctgccgcgtcctcgtgcaccgt
cccaacggccctgagctggacgccgacccctacgaccccaccgaggaggacccagccaag
agccgagccctggagagctctctgtgggagctgcagaccctgcagcagcactaccaccct
gaggtgtccaaagccgccagcgccatcaaccaggcactgtctgtccccgaggtcagcatc
gcgccgctcctggagctcactgcatatgagatcttcgagcgggacctgaagaagaagagg
cctgagccggtgccgctggagttcctcccgcctcagggcctgctgggccggcacgacagc
ctctgctcacagctcttcacgctcagctga
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