Oryx dammah (scimitar-horned oryx): 120854522
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Entry
120854522 CDS
T07255
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120854522 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120854522 (BARD1)
04121 Ubiquitin system [BR:
oda04121
]
120854522 (BARD1)
03036 Chromosome and associated proteins [BR:
oda03036
]
120854522 (BARD1)
03400 DNA repair and recombination proteins [BR:
oda03400
]
120854522 (BARD1)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
120854522 (BARD1)
Ubiquitin system [BR:
oda04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
120854522 (BARD1)
Chromosome and associated proteins [BR:
oda03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120854522 (BARD1)
DNA repair and recombination proteins [BR:
oda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
120854522 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
120854522
NCBI-ProteinID:
XP_040084504
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MQGNRQPRVRSGNQSHPAPAMKPAGRGAWAHSRAALDRLEKLLRCSRCTNILREPVCLGG
CEHIFCSYCVSDCIGSECPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDTDLSDLKE
ETSRKPLFKDAQNKKNSIKMWFSPRSKKVRYTVSKLSVQTHPSVKNDENAQQTSMYEFVS
TTPPVEVSEGPKKPSTKSRKKQKKKTLAEVNQKWNLEAEKEDGDLDSKEESKEKLVSFCS
QPSVIPNLQINGEIDLLASGSVTESECFGSLAEGFLPLAEHIESPEIESKNEVVTPEKTV
SANCLPSKKSLPSGCNGKRGHHNRISSPVSKRCRSSSQSTGGNSVKQTVLSENMPLPACS
SPPSNKKVGDTLRRRSHTILDESISLSPDTPPSTLNSPSYRRMMCSPSTTKLWPISLTAV
KRNHRGETLLHIASIKGDIPSVEYLLQSGSDPNVKDHAGWTPLHEACNHGHLRVVELLLQ
HKALVNTTGYQNDSPLHDAVKNGHADIVKLLLAYGAAREAVNIFGLRPVDYTDSKDMKSL
LLLPEKEESSSISHCSVVNTGQRRDGPLALIGSGLSSEQQKMLNELVTILKAKKCAEFDS
TVTHVIVPGDTVQSTLKCMLGILSGCWILKFEWVKACLQSKECEQEEKYEIPEGPQKSRL
NREQLLPKLFDGCYFYLGGTFKHHPKDNLIKLVAAGGGQILIRKPKPDSDVTQTINTVAY
HAKPDSDQRFCTQYIIYEDLSNHRPERVRQGKVWMAPSSWFIDCVMSFELLPLDN
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggaaccggcagccgagggtccgctccgggaaccagtctcatcctgcgcccgcc
atgaagccggcgggtcgcggggcctgggcccacagccgcgccgcgcttgaccggctggag
aagctgctgcgctgctcacgctgcactaatattctgagggagcctgtgtgcttaggcgga
tgtgagcacatcttctgtagttattgtgtaagtgactgcattggaagcgaatgtccagtg
tgttataccccagcctggatacaagatgtgaagataaacagacagctggacagcatgatc
cagctctgtagtaagcttcggaatttgctgcatgacactgatctttcagatttgaaagaa
gaaacatctaggaaacctttatttaaagatgcacaaaataagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaagtcagatatactgtgagtaaactttcagtgcaaacc
cacccttctgtgaaaaatgatgaaaatgctcagcagacctccatgtacgaatttgtctct
acgacccctccggtggaggtttctgaggggcctaagaagccttccacaaaatctagaaaa
aaacagaaaaagaagactttagctgaagtcaaccaaaaatggaatttagaggcagaaaag
gaagatggtgaccttgactccaaagaggaaagtaaggaaaagctggtatccttctgtagc
caaccatctgtgattcctaacttgcagataaatggtgaaatagacttactagcaagcggg
tccgtaacagaatctgaatgtttcgggagcttggctgaaggctttttaccattggctgag
catatagagtctccagaaattgagagcaagaatgaagtagtgactcctgaaaagacagtc
tctgcaaactgtcttccgtccaagaaatctttgccatcaggttgtaatgggaagcgtggg
catcacaacagaatttccagtcctgtttctaagagatgcagaagcagcagtcagagcact
ggtggaaactctgttaagcaaacagtgctctcagaaaacatgccattgcctgcatgttct
tcaccaccttcaaacaaaaaagttggggacacattaaggaggagaagccatactatattg
gatgaatccattagcctttcaccagatacgccaccttctaccctgaacagtccaagttac
agacgaatgatgtgtagtccctcaacgacaaagctgtggcccattagccttacagctgtg
aagagaaatcatcgaggagagactttgctccatattgcttcaattaagggcgacattcct
tctgttgaatacctcttacaaagtggaagcgaccccaatgttaaagaccatgctggatgg
acaccattgcatgaagcctgcaatcacgggcacctgagggtggtggaattgctgctccag
cacaaggcactggtgaacaccactgggtatcagaacgactcacctcttcatgacgcagtg
aagaacgggcatgcggacatcgtcaagctgttactcgcctatggagccgccagggaggca
gtcaacatatttggtctgcggcctgtggattacacagacagtaaagatatgaaatcactg
ttgctgctaccggagaaggaggagtcctcatcaatcagccattgctcagtagtaaacact
ggtcagcgtcgggatgggcctcttgcacttataggcagtggactttcttccgaacaacag
aaaatgctcaatgagcttgtaacgattcttaaagctaaaaaatgtgctgagtttgacagt
acagtaactcatgtcattgttcctggtgatacagttcaaagcaccctgaaatgtatgctt
ggaattctcagtggatgctggatcctaaaatttgaatgggtgaaagcatgtctacaaagc
aaagaatgtgaacaggaagaaaagtatgaaattcctgaaggaccacaaaaaagcaggctc
aacagagaacagctgttgccaaagctgtttgatggatgttacttctatttggggggaacc
ttcaaacaccatccaaaggacaaccttattaagcttgtcgctgccggtgggggccagatc
ctcattagaaagcccaagccagacagtgacgtgactcaaaccatcaatacagtcgcgtac
catgccaaacctgattctgatcagcgcttctgcacacagtatatcatctatgaggacttg
tctaatcatcgcccagaaagggttcggcagggcaaagtctggatggccccttccagctgg
tttatagattgtgtgatgtccttcgagttgctccctcttgacaactga
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