Oryx dammah (scimitar-horned oryx): 120882100
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Entry
120882100 CDS
T07255
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04613
Neutrophil extracellular trap formation
oda05014
Amyotrophic lateral sclerosis
oda05034
Alcoholism
oda05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
120882100 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
120882100 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
120882100 (HDAC6)
09165 Substance dependence
05034 Alcoholism
120882100 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oda01009
]
120882100 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120882100 (HDAC6)
04131 Membrane trafficking [BR:
oda04131
]
120882100 (HDAC6)
03036 Chromosome and associated proteins [BR:
oda03036
]
120882100 (HDAC6)
Enzymes [BR:
oda01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120882100 (HDAC6)
Protein phosphatases and associated proteins [BR:
oda01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120882100 (HDAC6)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120882100 (HDAC6)
Membrane trafficking [BR:
oda04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
120882100 (HDAC6)
Chromosome and associated proteins [BR:
oda03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
120882100 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
120882100
NCBI-ProteinID:
XP_040121835
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MTSTGQDSTTPKERRSRHSPHSPTHDSSITSKRGVKKSATLRSSPSLAEVKKKGRMKKLS
QTAEQDLIMGLQGLVRGSWDNQNPKNLNLEARTLSGTGLVFDEQLNEFHCLWDDSFPERP
ERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELHILAD
TYDSVYLHPNSYTCACLASGSVLRLVDAVLEAEIRNGMAIIRPPGHHAQHSLMDGYCMFN
HVAVAARYAQQKHDIQRVLIVDWDVHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHLKA
SNWSTTGLGQGQGYTINVPWNQVGMQDADYIAAFLHVLLPVAFEFQPQLVLVAAGFDALQ
GDPKGEMATTPAGFAQLTHLLMGLAEGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPM
LESPGAPCPSAQASLSCALEALEPFWESLVRSVDSLEEKDTVEKDDVEEEEEEKLPQSSE
LSVPTWPVLQARTGLVYDQRMMEHYNLWDNYHPEMPQRIHCIMYHLDEMGLAKRCHSLPA
RPATDAELLTCHSAEHLERLRATEKMKTRELCREGANYDSIYICSSTFACAQLAAGAACR
LVEAVLAGEVLNGIAIVRPPGHHAEPDAACGFCFFNSVAVAARHAQAISGHALRILIVDW
DIHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWNGP
RMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMG
LANGHIILILEGGYNLTSISESMAACTRSLLGDPLPLLTRLRPPLSGAQDSITKTIQVHR
RYWHSLKVMKRKNIEGLSSSKLVTKKPCQPASSGLANVMTTVEGNILGAGMGQAASEASV
KESTPDQTESATAPVELIQGQSSDTATQGAALDQTISEGATGGAELIQNPPASCINNRIP
PALPVQGATAQTSPRKLTANLRILDLDSTTQEPSEEEGLLGEAAGGQDTNESVPMQVFGD
HADTDQVMFYAVRPLLWCPHLAAVCPIPETGLNVTQPCQDCGTPQENWVCLSCYQIYCGR
YINGHMLQHHEGSGHPLVLSYADLSAWCYHCQAYVHHKDLLAVKNIAHQNKFGEDIPHSD
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggtcaggattccaccacacccaaggagcgaaggagtaggcacagcccc
cactccccgacccacgactccagcatcacctcgaagcgaggtgttaaaaagagtgccaca
ctccgctccagccccagtctagcggaggtaaagaagaaaggcagaatgaagaagcttagc
caaacagccgagcaagacctaatcatggggctacaagggctggtgagaggctcctgggac
aatcaaaaccctaagaatctgaacctggaggccaggacactgtctggcactggcttggtg
ttcgatgaacagctaaatgaattccactgcctctgggatgacagcttcccggaacgccca
gagcggctccatgccatcaaggagcaactgatccaggagggcctcctggaccgctgcgtg
tcctttcaggcccgatttgctgaaaaggaggagctgatgttggttcacagcctagaatat
attgatctgatggaaacgacccagtacatgaacgagggggagctccacatcctagcagat
acctatgactcagtttatctgcatccgaactcatacacctgtgcctgcctggcctcaggc
tctgtcctcaggctggtggatgcagtcctggaggctgagatccggaatggcatggccatc
atcaggcctcctggacaccatgcccagcacagtctcatggatggatattgcatgttcaac
cacgtggccgtggcggcccgttatgctcaacagaagcatgatattcagagggtccttatc
gtggattgggatgtgcaccatggtcagggaatacagttcgcctttgaccaagatcctagt
gtcctctatttctccatccaccgctatgagcagggtcggttctggccccatcttaaggcc
tctaattggtccaccacaggtttaggccaaggccagggatacaccatcaacgtgccttgg
aaccaggtggggatgcaagatgctgactacatcgccgctttccttcacgtcctcctgcca
gtcgcatttgagttccagccccagctggtcctggtagccgctggatttgatgccctccaa
ggggaccccaagggtgagatggccaccactccagcagggttcgcccagctcacccatctg
ctcatgggtctggcagaaggcaagctgatcctctcactggagggtggctataatctccgc
tctctggctgaaggtgtcagcgcctccctccacacccttctgggtgacccttgtcctatg
ttagagtctcctggtgccccctgcccgagtgcccaggcgtcactctcctgtgctctagaa
gccctggaacccttctgggagagcctggtgagatcagttgacagcctggaagaaaaggac
actgtggagaaggatgatgtggaagaggaggaggaagagaaactaccacagtcctctgag
ctctccgttccaacatggccggtgctgcaggctcgcacggggttggtctatgaccagcgg
atgatggagcactacaacttgtgggataactaccaccctgagatgccccagcgcatccac
tgtatcatgtatcacctggacgaaatgggccttgccaagcgctgccactccctgcccgca
aggcctgctacagatgctgagctgctcacctgccacagtgctgagcacttggaacgtctg
cgggccacggagaagatgaagacccgggagctgtgccgtgagggcgccaactatgactcc
atctacatctgctccagcacttttgcctgcgcacagctggctgcaggcgccgcctgtcgc
ctggtggaggcagtactggcaggagaggttttgaatggcattgctatagtgcgacctcct
ggccaccatgcagagccggatgcagcttgtggtttctgtttttttaattctgtggctgtg
gctgctcgccatgcccaggccatcagtgggcatgcgctgcggatcctgatcgtggattgg
gacatccatcatggtaatggaactcagcacatatttgaggaggaccccagtgtgctgtac
atttccctgcaccgctatgatcatggtactttctttcccatggggaatgagggtgcctgt
acccggataggtaaagctacaggcacaggattcactgtcaatgtggcctggaatgggccc
cgcatgggtgatgctgactacctggctgcctggcaccgtctggtgcttcccattgcttac
gagtttaacccagaactggtgctggtctcagctggcttcgacgctgctcggggggatcct
ctgggcggctgccaggtgtcgcctgagggctatgcccacctcacccacctgctgatgggc
ttggccaatggccatatcatcctaatcctagagggtggctataacctgacatccatctca
gagtccatggctgcctgcactcgctccctccttggggatccactgcctctgctgacccgg
ctgcggcccccactatctggagcccaggactctatcactaaaaccatccaagtccatcga
agatactggcacagtttgaaggtcatgaagcgcaaaaacatagagggactctccagttct
aagttggtcaccaagaagccatgccagccagccagttctgggttagccaatgtgatgacc
acagtggaagggaacatcctgggggcaggcatgggacaggccgcctcagaagcatctgtg
aaagagtccactccagatcagactgagtcagcgacagctccagtagaacttattcagggc
cagtcctcagacacagccacacaaggagctgcactggaccagaccatctcagagggggcc
acaggaggagctgagctgatccaaaaccctccagcctcatgcatcaacaacaggattcct
cctgccttacccgtgcaaggagccacagcccagacatcccccaggaagctgacggcaaac
ctcagaatattggacctagatagcacgactcaggagccctcagaagaggaaggactacta
ggagaggcagctggaggtcaggacacaaatgagtcagtgccaatgcaggtctttggagat
catgctgacactgaccaggtcatgttttatgcggtgagaccactgctttggtgtcctcat
ttggcggcagtatgccccatacctgagacagggctgaatgtgacccaaccttgtcaggac
tgtggaacaccccaggagaactgggtgtgtctgtcttgctatcagatctactgtggtcgt
tacatcaatggtcatatgctccaacaccatgaaggttcgggacaccctctagtactcagc
tatgccgacctgtctgcctggtgttaccactgtcaggcctatgtccaccacaaggatctc
ctagcagtgaagaacatcgcccaccagaacaagtttggggaagacataccccattcagac
taa
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integrated database retrieval system