Oncorhynchus gorbuscha (pink salmon): 124032401
Help
Entry
124032401 CDS
T07892
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124032401 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124032401 (hdac6)
04131 Membrane trafficking [BR:
ogo04131
]
124032401 (hdac6)
03036 Chromosome and associated proteins [BR:
ogo03036
]
124032401 (hdac6)
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
124032401 (hdac6)
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124032401 (hdac6)
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124032401 (hdac6)
Membrane trafficking [BR:
ogo04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
124032401 (hdac6)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
124032401 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
124032401
NCBI-ProteinID:
XP_046200735
LinkDB
All DBs
Position
LG03:complement(105019659..105052203)
Genome browser
AA seq
1116 aa
AA seq
DB search
MESVPEPRSVRRSPRTSNSPDHNAAKKESVKTRKKTSNLQETRRRGRMDRSKGEEDIANQ
LNNLDLCNEASATGTGLVFDSMFTHHRCLWDPSHPECPERVSTVMDMVEKQGLLSRCVTV
EARAASNEELHLVHTKEYVDLMRSTQLMDEDQLKTLADSYDSVYIHPESYTCASLAVGSV
LQLVDKVMTSELRNGFSVARPPGHHAQVDQMNGYCMFNNLAIAARYAQTRHRVERVLIVD
WDVHHGQGIQYIFQEDPSVLYFSVHRYEEGLFWPHLPASDSSAVGTGSGEGYNINLPWNK
IGMKDADYVAAFQQLLLPVAYEFQPQLVLVAAGFDSVIGDPKGEMSASPQCFSVLTHMLL
GLAQGKLLLVLEGGYNLQSTAEGVCACLRSLLGESCPRLGSPSIPSDSALKSISRSISAL
YPYWTSLQVLEGGPLSDSDPLNPVLTPAESSMELGEEVCEERGDSLDLTTGLVYDQRMME
HHNMWDSHHPELPQRIQRIFSRHDDLGLVSRCLRIPARLALEEELALCHSLEHIAKIKAT
EGMKTRDLHRLGDEYNSIFISTESYRSARLAAGACFNAVQAVLTGQVRNGVAIVRPPGHH
AEKDAACGFCFFNTASLTARYAQSISQKPLRVLILDWDVHHGNGTQHIFEEDDSVLYISL
HRYEDGTFFPTSEDAHYNRVGEGKGAGFNVNIPWNGAKMGDAEYLAAFHSVVMPIAREFD
PGLVLVSAGFDAARGDPLGGYHVTPPGYAHLTHLLMGLAGGRVLVILEGGYNLTAISESM
SACTSILLGDPALPLPPLPAPHPNAAVSINKVIRTHSAYWLSLRIQLPESLRLSLPNPKP
RGKRTSKGKKSPRQGNQGGASPGQGSPQTTPQTTSQTTPLPSGDRGDLDLDDLTKGLVSL
DLNQSTSANPSPASVSVGGARSKVRLSPMKSPVVKEVKTEAVPNTPEILQPTPDETETPA
VAMATSDPVTKGDQESGAVEGASGCSKEPVFELFCGNQDVDGSSMYVVDPLSWCPHLDSV
RPVPVGGIDVFRPCEDCGTDTENWICLCCYKVYCGRYVNQHMLTHGVVSEHRLVLSFADL
SVWCYSCQAYVHNQMVFEAKNAAHCMKFGEDMPLSN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgtgccagagcccaggtctgtcagacgttcccctcgcacgtcaaattcgccg
gaccacaacgcagccaaaaaggagagcgtcaagacccggaagaagacgagcaacctgcag
gagactcggaggagaggaagaatggacagaagtaaaggagaggaggacatagccaatcaa
ctgaacaacctggatctatgtaacgaggcttcagccacagggactggtctggtgtttgac
agcatgttcacacaccatcgctgtctctgggatcccagtcacccagaatgcccagagaga
gtgagcactgtaatggacatggtggagaaacagggactgctgtctcgctgtgttacagtg
gaggcgagggctgcgtctaacgaagagctgcacttagttcacacgaaggagtatgtagat
ctgatgaggtccactcagcttatggacgaagaccagctgaagacgctggctgactcctat
gactcggtctacatccaccctgagtcatatacgtgtgccagtctggctgtgggctctgtt
ctgcagctggttgataaggtcatgacctcagagctccggaatggattctctgttgctaga
cctccaggtcaccacgcccaggtcgaccagatgaatggttactgtatgttcaataatctg
gccatcgcagcgcgctacgcacagacacgccatcgagtggaacgagttctgatagtggac
tgggatgtgcatcacggccaggggatccagtacattttccaggaggatcccagcgttctg
tacttctcagtccacagatatgaggagggtttgttctggccccatctgcccgcgtcagac
agcagtgctgtgggcaccggttctggggagggatacaacatcaacctgccctggaataag
attggaatgaaagatgcagactacgttgccgcattccagcagcttcttttgcctgtagcc
tacgagttccagcctcagcttgtcctggtggcagcaggcttcgactctgtgataggtgat
cccaagggagagatgtctgccagtcctcagtgtttctctgttctgactcacatgctgctg
ggcctggctcaggggaagttgctgttggttctcgagggaggatataacctacagtccacc
gcagaaggggtatgtgcctgtctgaggtcactattgggggagtcctgcccccgcttgggg
tcaccatccatcccgagtgacagtgccctgaaatccatctccaggtctatctctgctctg
tacccttactggaccagtctgcaggtactggagggagggcctctatcagacagcgacccc
ctgaacccagtcctgaccccagcagagagcagtatggagttaggtgaagaggtctgtgag
gagagaggagacagcctggacctgaccacgggcctggtgtacgaccagaggatgatggaa
catcacaacatgtgggacagccaccacccagagcttccccagaggatccagcgtatcttc
tcccgtcatgacgacctgggcttggtgtcccgttgcctgaggataccggctcgacttgcc
ttagaggaggagctggctctgtgccacagcttggagcacatagccaagatcaaggccaca
gaggggatgaagacgagggaccttcacagactgggagatgagtacaactctatcttcatc
agtactgagagctacaggagcgcccggttggccgctggggcctgctttaatgcagtacag
gctgttctgacgggacaggtccgtaatggcgtggccatcgtgcgcccccctggtcaccat
gccgagaaggacgctgcctgtgggttctgtttcttcaacaccgcctccctgactgcccga
tacgcccagtccatctcccagaagcccctgcgggtcctcatcctggactgggatgttcac
catggcaacggaacacagcacatcttcgaagaggatgacagtgtcctctacatctccctg
catcgctacgaggatgggaccttcttccctacttccgaggacgctcactacaacagagtg
ggcgaggggaagggagcagggttcaacgtcaacatcccctggaatggagccaagatgggc
gacgcggagtaccttgcagctttccactcagtggtcatgcccatcgctagagagtttgac
ccgggcctggttctggtatcggcagggtttgatgcagccaggggggaccctctaggaggt
taccacgtgacccccccgggctatgcccacctcacccacctcctgatgggcctggcaggc
ggcagagtattggtcatcctggagggtggttataacctgactgccatttcggagtctatg
tctgcctgcaccagcattctcctgggagaccccgctctgcccctgcctcccttgcccgca
cctcaccccaacgcagcagtcagcatcaacaaggtcatacgcacccactccgcctattgg
ctgtccctcaggatacagctaccagagtctctccgtctgtctctgccaaaccccaaaccc
cgagggaagaggacttctaagggcaagaagtctcccagacagggtaaccagggcggggcc
agccctggtcaggggtcacctcagaccacacctcagaccacatctcagaccacacctctg
ccctctggtgatcggggcgaccttgacctggatgacctcacaaagggactggtgtcactc
gacctaaaccaaagtacctcagccaatcccagcccagcgtccgtctctgtgggtggagcc
aggtcgaaggtgaggctcagtcctatgaagagcccagttgttaaagaggttaagacggaa
gctgttccaaatacgcccgagattctccaaccaacgcctgacgagacagagacgccggcg
gtcgccatggctacctcagacccagttaccaagggagaccaggagagcggtgcggtggaa
ggggcgtctggttgctccaaggagccggtgtttgagctgttctgtggaaaccaggatgtg
gacgggagctctatgtacgtggtggatcccctgtcctggtgcccccacctagactcagtg
aggcctgttcctgttggaggtatagatgtgtttcggccctgtgaggactgtggaaccgac
actgagaactggatctgtctctgctgctacaaggtgtactgtggtcgctatgtcaaccag
cacatgttaacccacggcgtggtgtcagaacaccggctggtgctgagcttcgctgacctg
tcggtctggtgttactcctgtcaggcctacgtccacaaccagatggtgtttgaagccaag
aacgctgcccactgtatgaagtttggagaggacatgcccctctctaactga
DBGET
integrated database retrieval system
