KEGG   Oncorhynchus kisutch (coho salmon): 109879062
Entry
109879062         CDS       T09179                                 
Name
(RefSeq) methylcytosine dioxygenase tet3-B-like isoform X1
  KO
K13097  methylcytosine dioxygenase [EC:1.14.11.80]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oki03000]
    109879062
   03041 Spliceosome [BR:oki03041]
    109879062
Enzymes [BR:oki01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.80  methylcytosine dioxygenase
     109879062
Transcription factors [BR:oki03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    109879062
Spliceosome [BR:oki03041]
 Complex A
  Other components
   Complex A specific factors
    109879062
SSDB
Motif
Pfam: Tet_JBP zf-CXXC
Other DBs
NCBI-GeneID: 109879062
NCBI-ProteinID: XP_031679649
Ensembl: ENSOKIG00005042316
LinkDB
Position
LG4:81824507..81921675
AA seq 2462 aa
MPPTPKPPKRQPPPQTRNGCKVIPTTTTTTTTAKRQISNSSKFRGKAIESPQSTPKPPRR
STTRTQAQPARSPGRSGVGRLGSQVPGGSPGRVNHAPVHVTGSVRLRSRGNPLLQHGVGE
DPPGRRMSLRGMGCSKKFPPLTVKPSRGGKKARGRGARGARGQRWSERGIEQGPEESDPG
SIDPSMIDQEKEVVSHDSEGQPLNLRTELEDPSCVDQQEPGVGHECEGKPLNLRTELDDT
SCVDQQELGVSHDSEGKPNQRTELDDHSCIDQQEPGVGHDGEGKPLNLRTDDSASDDKHE
ELVAHNGDTVGTDPHNKPFSHSGQGKHSELNDPISVDQQQEKLVNTISEGNSAQFYQSHE
LGDSTSDERQEVSVVPKGEDKAKINLGAEQIEIEQRERDTHAEEQRGGERLEKDGKEAVE
EEAVEEGEKTDEEKKKAEGEERVEIVKVKETKEREEKDERLEKREFISRPPDTSSSISVS
QPQKPPLQDDMLMMQSPVHPPSVAEPATSDLVSPPLPHPHPTFTLHPTMSHDIKVLNQGA
KLIQPTQTVEIHKPLKVPTTFHETSQMTSVHPVSLSLSVAFLSEPHKSLCVIPANPAPGQ
SPESPVSPEARQLLRPVDKETRESSNHLNVKLSSSSASSSSDLYTNAEVPITVSVPDLVP
LSNNHNNYPEEPPSSSSLPYTKKDVFTTGSEPDKDIVSVSDCDLGSGPMTHNKYNQDEPQ
PSLPNTDTRSEPNTGSEPNTDIASVSVSDLGSVPKTSCIPNQESSSSKFSFSFSCSSEST
QSSYSFDTESETGYGELSPSGHPSLDLGHLDRGTSLPRTPRIIQRRERKKRSRCGGCEPC
LRKINCGQCSCCLNRRTGHQICKLRKCMELRKRRPMSLLTLTSTQVGCKDVAKPALKKPV
STVVPEDSSVNGRGPVQMAEDTCTAAEDDEEGHIPHTHPPHIHTLAQIQDGRPAALIKRE
PGLEDTNDGLLLQHHCSSSGTFHNGANENMAKTNGANENMAKTNGANENMAKTNGAQLIA
GPESHQLSPESQNTTIQLESQSTTKSTYPKGSSELKDALLDDSIAVPLKKIKVEEPWVWS
MDQSSAPLGGDDDDVYEDALSTLAAVVCFSITDRKGLEEKLCSSRSPVLRSFKTEPEDFK
VDICLKSAPISPRKALNIIVKREQPSPDLSQPSIQSLVEERNISNDQAIAIEALTLLAAI
PQNSPEPFRTNAQGENPTTPSMHLSNRNTPLQGSNKVLVINSPLHQTSVIRSPLHQTSVI
RSPVARQAHVIQCHSRSPAATGNLSLQDLLEASSDCDRLPYDSTERAGQHLYRRADQGLG
SQHNRGEGTFRQRKDMERNSKEPIERTVGKSGRNSKEPIERTVGKSGRNRDEEEVAAQLA
ELAFIIQSRHKQQGFHPSQHSENNPPRGTPVSAIKYNYNSEQAPPNHKKTPVKRPRTTLS
KPRKKKGTEGLEEEGCKPNNRTPLYKRIPNGKTPHRARVQKVLPQPKTSSLSHKRSLFLP
QAQMDLKRYLTEAQEERRQLFYYSNAHSGVKYHKTSGAVDRGRSQGYGHDNQQWSHFNGH
LDPLQGQGVGQGHDCERGLYSQVSQPYVGQQHGANLKASSTIPSFTSIDSNNHRTGLNHG
LSNGYSSGGQQQGYYKVERSGPVTVLSTSANGDLDLSEESTPTKHNVNSFLESPLRFLDT
PTKNLLNTPSKKLSEIPSCGCMKQIIEKEEGPYYTHLGAGPSVSAVREMMENRYGEKGKA
VRVEVVVYTGKEGRSSQGCPIAKWVIRRGSEEEKLLCLVRHRAGHRCESAVVVILILAWE
GIPRGVADSLYQELTQTLCKYGSPTSRRCALNEDRTCACQGVDPNTCGASFSFGCSWSMY
FNGCKFARSKIPRKFRLLGDMPQEEVKLEHRLQNLATDLGPVYQRLAPEAFQNQVDLEQA
GQDCRLGRRAGRPFSGVTACVDFCAHAHKDTQNMNNGSTVVCTLTKEDNRAVRNIPEDEQ
LHVLPLYKISQRDEFGRADGQWAKIQTGALQVLSAFPREVRLLAEPVKSARKRKQEAKLK
AQADKQAAAQDRKPGQSPLTPGKVKTESTNKGSKSTSSVDQSSSFKAEPQSFYSSFTPGS
VGAYAPESNSPSPYHHSTPTYPTPPGRSTPGMEALSPHRPGMPSTQYGYRGPPGAQCNGS
PLHYKTMGEDVNGYSPGLIRKQLAKTERCGTPGDYPPRTFKMEPNEVHCSPLVRPPHSHS
TPPPSSFSAPLPHPEGLHSRLNGLPGVAEEIGDGVKGHGGHDLPHCATHLPLQAPPPLFP
NPEEVKQEQEEVWSDSEHNFLDSDIGGVAVAPSHGSILIECARRELHATTPILRPDRSHP
TRISLVFYQHKSLNEPDHGLHMWEAKMARREREREEEAERIGMGLDLDLEEVSPVKGKGK
RGKGAGAESVEPEEEVEEEGPEEKKGVLKVPTRQAVTVARDGVVTVSPYALTQVTGPYNR
WT
NT seq 7389 nt   +upstreamnt  +downstreamnt
atgcctcctactcccaaaccccctaagagacaacccccaccacagacaaggaatggctgc
aaggtgatacccacaacaacaaccaccaccaccaccgccaagaggcagatctccaactcc
agcaagtttagaggaaaagccattgagagcccacagtcgacaccgaaaccaccccgaaga
tccacaaccaggacccaggcccagccggccagaagcccagggaggagtggggttggcagg
cttggcagtcaggtcccgggggggtcccctggtagggttaaccatgcccctgtgcatgta
acaggatcagtgaggctaaggagccggggtaatcctctgctccagcatggggtgggagag
gatccgccggggcgcaggatgtccttacggggcatggggtgctccaagaagtttcctccc
ctgacggtaaagcctagcaggggagggaagaaagccagagggaggggggcgaggggagca
aggggtcagagatggagtgaaagagggattgagcaaggacctgaggagtctgaccctggt
agtatagaccctagtatgattgaccaagagaaggaggtagtcagccatgatagtgagggc
caacctcttaacctaaggactgaacttgaagacccttcctgtgttgaccagcaggaacca
ggagtcggccatgaatgtgagggaaaacctcttaacctgaggactgaacttgatgacact
tcctgtgttgaccagcaggaactaggagtcagccatgatagtgagggcaaacctaaccag
aggactgaacttgatgaccattcctgcattgaccagcaggagccaggagtcggccatgat
ggtgagggcaaacctcttaacctgagaactgatgactcagctagtgatgacaaacatgaa
gagttagttgcccataatggtgacacggttggtactgacccacacaataagcctttcagc
catagtggtcagggcaaacactctgagctcaatgaccccatcagtgttgaccaacaacag
gaaaagctagtcaatactattagtgagggcaattcagcgcaattctaccagagccatgag
cttggtgactctaccagtgatgagaggcaggaagtgtcagtcgtccctaaaggtgaagac
aaagccaagattaaccttggagctgagcagattgagatcgagcagagagagagagatact
catgcagaggagcagagaggaggggagaggttggagaaggatggaaaggaagcagtagag
gaggaagcagtggaggaaggagagaagactgatgaagaaaagaagaaagcagagggggag
gagagagtggagatagtcaaggtgaaggagaccaaggaaagagaggagaaagacgagaga
ctggagaagagagagtttatcagcagacctccagacacaagctccagtatttctgtctct
cagccccaaaagccacctctgcaggatgatatgttgatgatgcaatcacctgtccatccc
ccatctgtcgctgaaccagctacctcagacctggtgtcaccccctctccctcatcctcac
ccgacctttacacttcaccccacaatgtcacatgacattaaggttctgaaccaaggtgca
aaactaatccaacctacccaaactgttgaaatccataaacctttaaaagtcccaactact
ttccatgagacatcacagatgacctcagtgcacccagtatcactaagtctctcagttgcc
ttcctcagtgaaccccacaagtctctatgtgtaatcccagcgaacccagcacccggtcag
agcccagagagccctgtctctccagaggctagacaacttctcagaccagtggacaaagag
accagagagtcatccaatcacctcaatgtaaaattatcttcatcatctgcatcatcatcg
tcagacctgtacaccaacgcggaggtccccatcactgtgtctgtacctgacctggttcca
ttgtcaaacaaccacaacaattacccagaagaaccaccatcatcatcatcactcccatac
acaaagaaagacgtcttcaccactgggtctgaaccagacaaagacattgtatctgtctct
gattgtgacctgggttctggtccaatgactcacaacaagtacaaccaagatgagccacaa
ccatcactcccaaacacagacacaaggtctgaaccaaacacagggtctgaaccaaacaca
gatattgcatctgtctctgtatctgatctgggttcagtgccaaagacctcctgcatccct
aaccaggagagttctagctccaagttctcattctccttctcctgcagctctgagagcacc
caatcctcctactccttcgacactgagtcagagactggatatggggaacttagccccagt
ggacaccctagcctggacctgggacacctggacaggggcacatctctgccccgaacccca
cggatcatccagaggagggagaggaagaagaggagtaggtgtggagggtgtgagccgtgc
ctaaggaagatcaactgtggccagtgtagctgctgtctgaaccgcaggactggacaccag
atctgtaaactgaggaagtgtatggagctgaggaagaggaggccaatgtcactgctcaca
ctaacatctactcaggtggggtgcaaggacgtggccaaaccagcattaaagaaaccagtt
tccacggtggttccagaggacagctcagttaatggaagaggccctgtccagatggcagag
gacacctgtacggcagcggaggacgacgaggagggtcacatacctcacacacaccctccc
cacatccacactcttgcccaaatccaagatggacgaccagcagcacttatcaagagagag
cctggcctggaggacaccaatgatggacttcttctacagcaccactgctcttcttctggg
acttttcacaacggtgctaacgaaaacatggctaaaaccaatggtgctaatgaaaacatg
gctaaaaccaatggtgctaacgaaaacatggctaaaaccaacggtgctcaactgattgct
ggtccggaatcacatcagttgtcacctgagtcccaaaataccacaatacaattagagtcc
caaagtactacaaaatctacgtaccccaaaggcagctctgagctgaaggatgcacttctg
gacgacagcatagctgttcctctgaagaagataaaggtggaagaaccgtgggtgtggtcc
atggaccagtcctccgccccactagggggcgatgatgacgatgtctatgaggacgctctg
tccacgctagcagccgtggtgtgtttctctatcacagacaggaagggtctggaggagaag
ttgtgtagctcccgatccccggtgctacgctcattcaaaacagagccggaggactttaag
gtggatatttgcttgaaaagtgctcccatcagtccacgaaaagctctcaacattattgtc
aaacgagagcaaccctctccagatctctctcagccaagcatccagtctttggtagaagag
aggaatattagcaatgaccaggctatcgctatcgaggcgctaaccttactggcagctatc
ccacaaaactccccagaaccctttagaaccaacgcacagggtgaaaaccccaccacacca
tccatgcacttatccaatagaaacacccctctccagggctccaacaaagttctagtgatc
aactcccctctgcaccagacctcagtcatacgctcccctctgcaccagacctcagtcata
cgctccccagtggccagacaagctcatgtcatccagtgtcattcccgtagccccgcagcc
actggcaacctgtccctacaggacctgctagaagccagctcggactgtgacagacttccc
tacgacagcaccgagagagcaggacaacacctgtacaggagagcagaccaaggccttggt
tctcaacataacaggggtgaaggcactttcagacagcggaaagacatggagaggaacagc
aaggaaccaatagagaggacagtgggtaagagcgggaggaacagcaaggaaccaatagag
aggacagtgggtaagagcgggaggaacagggatgaggaagaggtggcggctcaacttgcc
gagttggcgttcatcatccaatcacgtcacaagcagcagggtttccacccctcccagcac
tcagagaacaaccctcccagaggaactcctgtctcagccatcaagtacaactacaactcg
gaacaagcaccacccaaccacaagaagacccctgtgaagagacccaggaccacactttct
aaacctaggaagaagaagggaacggaggggctggaagaggagggctgcaaacccaacaac
cgtacccccctgtacaaacgaatacccaacggcaagaccccccacagagccagggtccag
aaggttctgccccagccgaagacatcatcgctcagccacaagaggagcctgttcctgcct
caggcccagatggatctgaagaggtacctgactgaggctcaggaggaacgacggcagctc
ttttactacagtaacgcccacagtggggtcaaataccacaaaacctctggagccgtcgat
cgtggtcgaagtcaaggttatggtcatgacaaccaacagtggtcgcatttcaacggtcac
ctggaccctttacaaggacaaggagttggacaaggacatgattgtgaaagaggattgtat
tctcaggtatcgcagccctacgttgggcagcagcacggtgctaacctaaaggctagctcc
actatccccagtttcaccagcatagactctaacaaccacagaaccgggttgaaccatggt
ttatccaatggctactcctctgggggtcaacagcaggggtattacaaagtggagaggtcc
ggtccggtcaccgtcttgtccacgtcagctaacggcgatttggatctatcggaggagtcg
acacccaccaaacacaacgtgaacagcttcctggaatcgcccctcaggttcctggacacg
cccactaagaatctgcttaacaccccctccaagaaactctctgagatcccctcctgtgga
tgcatgaagcaaatcatagagaaggaggagggtccatattatactcaccttggtgctgga
cccagtgtgtcagccgtcagagagatgatggagaacaggtatggagagaaagggaaggcg
gtaagggtggaggtggtggtgtatactgggaaagaaggacgcagttcccagggctgtccc
atcgccaagtgggtgatccgtcggggcagtgaggaggagaagctgctgtgtctggtgaga
caccgggcagggcaccgctgtgagagtgccgtggtggtgattctcatcttggcatgggag
ggcatcccccggggcgtggcagacagtctgtaccaggagctcacccagactctctgtaaa
tacggctcccccaccagccggcgctgtgcactcaacgaggatcggacgtgtgcttgccag
ggtgtggacccgaacacctgcggcgcttccttctcctttggctgctcctggagtatgtac
ttcaacggctgcaagttcgcccgcagcaagatcccccgcaagttccgcctgctgggagac
atgccacaggaggaggtgaaactggagcatcgtctacagaacctggccacagacctgggt
cctgtctaccagagactggccccggaggccttccaaaaccaggtggatctggagcaggcg
ggccaggactgcaggctgggtcggagggcgggccgacctttctccggggtcacggcatgt
gtggatttctgcgcccacgctcacaaagacacacagaacatgaacaacggcagcactgtg
gtttgcactttaaccaaggaggacaaccgtgcggtgcgtaacatccctgaggatgaacag
ctccacgtcctacccctctataagatctcgcagagggatgagtttggccgtgccgatggc
cagtgggccaagatccagactggggccctgcaggtgctgtcagccttccccagagaggtg
cgtctgctggctgagccggtgaaatcagcccgtaagaggaagcaggaggccaagctgaag
gcccaggctgacaaacaggctgcagctcaggacaggaagcctggacagagtccactaacc
ccaggcaaggtcaagaccgagagcaccaacaaaggttccaaaagcacttcatcagttgat
cagtcctcctcattcaaagcagagcctcagtccttctacagctctttcacaccaggaagt
gtgggtgcctatgctccagagtctaactcccctagcccttaccaccacagcactcccacc
taccccactcctccaggaagatccacccctgggatggaggctctttccccccatcgtccc
ggcatgccttccacccagtacggatacagagggccaccaggggcccagtgcaatggatcc
cccctccattacaagacaatgggagaggatgtaaatggttactccccaggactcatcaga
aagcagctggcgaaaactgagagatgtgggacacctggcgactacccccccaggacgttt
aaaatggaacccaacgaggtgcactgctcccctcttgtcagacccccccacagccacagt
actcctcctccatcctccttctccgcccccctcccccacccagagggcctccacagcaga
ctcaacgggctccccggggtggcggaggagatcggggatggggttaaaggtcatggaggt
catgacctcccccactgtgccactcatctcccccttcaggcccctccccctctcttcccc
aacccggaagaggtcaaacaggaacaggaagaggtgtggtcagacagcgagcacaacttc
ctggacagtgacattggcggggtggcggtggctccctcccacggttccattctgattgag
tgcgcacgcagagagctccatgccaccacccccatcctccgacccgaccgcagccacccc
acccgcatctccctggtcttctaccagcacaaatccctcaacgagcctgaccatggcctg
cacatgtgggaggcaaagatggcccggagggagcgggagagggaggaggaggctgagagg
atagggatgggcctggacctggacctggaagaggttagcccggtcaaggggaaggggaag
agggggaagggggccggggctgagagtgtggagcctgaggaggaggtagaagaggagggc
ccggaggagaagaaaggggtgttgaaggttccgacccggcaggcggtgaccgtagcgcgg
gatggggtggtcactgtgtccccttatgctctgacacaggtcacgggcccctacaaccgc
tggacatga

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