Osmia lignaria (orchard mason bee): 117606046
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Entry
117606046 CDS
T09775
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
olg
Osmia lignaria (orchard mason bee)
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
olg01009
]
117606046
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olg03019
]
117606046
04131 Membrane trafficking [BR:
olg04131
]
117606046
03036 Chromosome and associated proteins [BR:
olg03036
]
117606046
Enzymes [BR:
olg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
117606046
Protein phosphatases and associated proteins [BR:
olg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117606046
Messenger RNA biogenesis [BR:
olg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117606046
Membrane trafficking [BR:
olg04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117606046
Chromosome and associated proteins [BR:
olg03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
117606046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
BPTA
Talin_R4
PTS-HPr
Motif
Other DBs
NCBI-GeneID:
117606046
NCBI-ProteinID:
XP_034183913
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MSDSVISGNLFTAAKQLADSEIQLIKAIENSKKINNKSITSNMSVTHKKGAKKSIKVSNV
RPSAALVAAKREVAQRHTLQGKKSTNVFVHDVYQKAIDSYNIKRKETGLVFDQSMTEHEC
LWDSNYPECPARLTRVLQRCEQLGLINRCKLIESRLATEKEILLKHSQKQIDILKSTDEC
TDADNLELLSSKYDAIYVHPSTYRLSQIAVGSTINLVESICKGYVQNGMAVIRPPGHHAM
KSEYCGYCFFNNVAIAAENALRNDLANKILIVDWDVHHGQATQQMFYDDPRVIYFSIHRY
ENGEFWPNLRESDFHFVGDGLGEGYNFNIPLNKTGMTNADYLAIFQQVLLPVAYEFQPDL
ILVSAGYDAALGCPEGEMLVTPACYAHLLSSLLCLASGKVAVILEGGYCLKSLAESAALT
LRTLLGDPCPMLQNLELPSIGIRDTILNVIYAHKPYWKCYQYQDSYSINSTINNKEENVN
QHLPVVIFRGSSVKPEIYETRNCYPVQSKETIEAIEKQLNTLIQSTNLSKAPNKVCVVYD
ERMLKHHDISDDSHPEKPNRISVIYKKFQKYNLLERCYVQQGRSATIEELLLIHSQEYID
KIKNTDNLKTKELYKQATSYNSVYLHPDTWTSACVSTGSLLQVVDSVLNGESQSGVAIVR
PPGHHAEQDAACGFCIFNNISVAAKYAIEFHHVKRVLIVDWDVHHGNGTQSVFEEDPKVL
YISVHRYDNGGFFPNSKRGNYTHVGSGPGEGFNVNIPWNKKGMGDAEYIAAFQQAVMPIA
YQFNPELILVSAGFDACIGDPLGGCFVTPEMYGHLTHWLSSLANGRIILSLEGGYNINSI
AHAMTICTKTLLDDPLPMLESNQIPCTSAINTINNVLKTQKQYWLNLMFNLSLPKEKVLP
QAEIPGIKTNGEETKHSESKIALEEIESEKLELKLSIDKNCVTDEEILKLQNEVENIKIR
NSLYDDTSKKTEKIHNNSINMQAINNVKVSECTKKCINQDGKKGLPPQNFPNSASGSDNE
QGDRAAAQSSTNINLYDYLSENLQALVAGEMFAVVPLRECPHLNSVSDVPASGIDVHLPC
AECGSNVENWICLQCYTVHCARNINQHGILHAEEMEHPLALSFSDLSVWCYRCEAYIDNP
RLFAARNAAHQSKFNEELPWTYSEN
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactctgtgataagtggaaatttatttactgctgctaaacagttagcagacagt
gagatccaattgataaaagctatagaaaattctaagaagataaataataaaagtattaca
agtaatatgtctgtgacacataaaaagggtgccaaaaaatcaatcaaagtttcaaatgtt
cgtccatcagctgctttggtagcagctaaacgtgaagtagcacagaggcatacattgcag
gggaaaaaatctactaatgtttttgtacatgatgtatatcaaaaggctatagattcatat
aatattaaacgaaaagaaactggtcttgtgtttgatcagtctatgactgaacacgagtgt
ctttgggattcaaattatccagaatgtccagctagattaacaagggttttacagagatgc
gaacagttgggtttaataaacaggtgtaagttaattgaatcaagacttgctactgagaag
gaaatacttctgaagcacagccagaaacaaatagacattctgaaatccactgatgaatgt
acagatgctgataatttagagttactatcatccaaatatgatgcaatttatgtacatcct
tctacctacagattatcccagatagctgtgggttcaacaataaacttagtggaaagtatt
tgtaaaggatatgttcagaatggaatggctgttataagaccacctgggcatcatgcaatg
aaatcagaatattgtggatattgttttttcaataatgttgcaattgctgctgagaatgct
ttgagaaatgatttagctaacaaaattttaatcgttgattgggatgtacatcatggacaa
gcaactcaacaaatgttttatgatgatccacgagtaatttatttttccattcatcgttac
gagaacggtgaattttggccgaatcttagagagtctgatttccattttgttggagatggc
ttaggagaaggatacaacttcaatataccacttaataaaactggtatgaccaatgctgat
tatttagctatatttcaacaagttttattgccagtagcctatgagtttcaaccagatctc
atattagtgtcagctggttatgatgcagctttgggctgtccagagggtgaaatgttggtg
acccctgcatgttatgcgcatcttttgtcatctttattgtgtctggcctctggaaaagtt
gctgttatattagagggtggttattgcttaaaatcattagctgaaagtgcggcattaaca
ttacgtactttattaggtgatccatgccctatgttacaaaatcttgaactaccttcaata
ggtatacgtgatacaattttaaatgtaatttatgcacataaaccatactggaagtgttat
caataccaagattcatacagtattaatagtacaataaataataaggaagaaaacgttaat
cagcatttacctgtagttatattcaggggaagtagtgttaaaccggaaatatatgaaaca
agaaattgttatccagttcaaagcaaagaaactattgaagcaatagaaaaacaattgaat
acattaatacaatccaccaatttatctaaagcaccaaataaagtatgtgtcgtttatgat
gagagaatgttaaaacatcatgatatatctgatgatagccatccagaaaaaccaaaccgt
attagtgtaatatacaaaaaatttcaaaaatataatttacttgaacgatgttatgtacag
cagggacgaagtgcaacaatagaagaattattattgattcattcacaagagtacatagat
aaaataaagaatacagataatttaaaaacaaaggaattatataaacaagcaacaagctac
aattcggtttatctgcatcctgacacttggacaagtgcctgtgtatctactggatcgtta
ttacaagtagtggatagtgtattaaatggagagagtcaatctggtgttgctattgtaagg
cctccagggcatcatgcggaacaagatgcagcatgtggtttctgcatcttcaacaatatt
tctgtagctgctaaatatgccatagaatttcatcatgtaaaaagggtactaatagtggat
tgggatgtacaccatggtaatggaactcaatcagtatttgaggaagatccaaaagttctt
tatatatctgtccatcgttatgacaatggcggtttctttccgaattctaagcgaggtaat
tacacccacgttggttctggaccaggagaagggtttaatgttaacataccgtggaacaag
aaaggaatgggtgacgcggagtatatagcagcattccaacaagcagtaatgccaattgca
tatcaatttaatccagaattgatcttagtctcagctggttttgatgcatgcatcggtgat
cctcttggaggttgttttgtaacaccagagatgtatggacatttaacacactggttatct
tctttggctaatggccgcattattcttagtctcgaggggggttacaacattaattcaatc
gcgcatgcaatgactatatgcacgaaaacattgctcgatgatcctttaccgatgttagaa
agtaaccaaattccatgtacaagcgctattaatactataaataatgttctaaaaacgcag
aaacaatattggctaaatttgatgtttaatctatctttaccgaaagagaaagtacttcct
caggctgaaatacctggtataaaaacaaacggcgaagaaactaaacactcagaatctaag
atagcgctggaggaaattgaaagtgaaaaattagaactgaaactttcaattgataaaaat
tgtgtgacagatgaagagatattaaaattacaaaatgaagtagagaatattaaaataaga
aattcgttatatgacgatacttcgaaaaagacggaaaaaatacataataattcgataaat
atgcaagctattaataacgttaaagtgtctgaatgtacaaagaaatgtataaatcaggat
ggaaagaaaggattgcctccgcaaaactttcccaattccgcttccggcagtgataatgaa
cagggtgacagagcagctgcacaatcaagtaccaatataaatttatacgattatctatct
gaaaatttgcaagcattagtagccggcgaaatgtttgcagtagtacctttacgagaatgt
ccacatctaaacagtgttagcgatgttccagcttcagggattgatgtacatttaccatgt
gcagaatgtggtagtaatgttgaaaattggatttgtctacaatgttatactgtacattgt
gctcgcaacattaatcaacacggtatattacatgctgaagagatggaacatcctttggct
ttgagttttagcgatttatcggtttggtgttaccgatgtgaggcatatatagataaccca
cgattatttgcggcacgtaacgctgcacatcagagtaaatttaatgaagaattaccgtgg
acatacagcgagaactga
DBGET
integrated database retrieval system
