Oenanthe melanoleuca (Eastern black-eared wheatear): 130266102
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Entry
130266102 CDS
T09236
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oma01009
]
130266102 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130266102 (HDAC6)
04131 Membrane trafficking [BR:
oma04131
]
130266102 (HDAC6)
03036 Chromosome and associated proteins [BR:
oma03036
]
130266102 (HDAC6)
Enzymes [BR:
oma01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
130266102 (HDAC6)
Protein phosphatases and associated proteins [BR:
oma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130266102 (HDAC6)
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130266102 (HDAC6)
Membrane trafficking [BR:
oma04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
130266102 (HDAC6)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
130266102 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Sigma70_ner
DNA_pol_phi
CDC45
Nop14
Motif
Other DBs
NCBI-GeneID:
130266102
NCBI-ProteinID:
XP_056371396
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MGRAGRRLPQQGALFQARRRGRARGRRAGLEAELQQLDLGAEATAPTGTGLVSDGGDGAE
HGDGRPPGDPVLAGLLQRCVPVQCRTATDEELLLVHSPSYVARLEPPDSPPQGGSGPRRA
VGAALALLEQVLGGNLRNGVALISSQDAQDPPEPTAVATRVAQKHLGVQRVLIVDWSPRP
GRSLPQLFQEDPSVLYFGARSGLEPPPSAGQGPGEGFSVELCWEQPGVTDGDFAAAAFHI
LLPIAFQFQPQLVLVEASLEDLGGSLGVSPAGFSLLTHLLSALARGRLLLLLQGGPDLGA
SPGGVGAVLRTLLGDPGDPPGPITPTPSGLASIARTLSEHQRYWGCLQSDEAEEEEEEEG
EEEEGEEGEEGEEEGGEEEEEDEEEEKEELEGDGNPPETPARARVGLVYDPRMEEHRNTW
DSQHPECPQRLARVLQRLQELGLAQRCFRLPARPASTRQLRACHTRSHVRALSRIPSLSP
RALRALSQRYNSVFVCAGSFHCARLAAGGACAAAAAVLRGQVRSALAVVRPPGHHACPGS
AGGFCLFNNVGVAARHAQSLAGTPAPLRVLILDWDVHHGNGTQEIFEEDPSVLYVSLHRH
DGSFFPGGPGGSPRRRGRGPGCGFTLNVGWGGPRVGDPEYLAALTRLVLPVALQFGPELV
LVSAGFDAGRGDPLGGCLVSPQTFGLMTHLLGALAGGRLVLVLEGGYNLAVTAEGVGQCL
GVLLGDPPSLPPPGSPQPAALRALSRTLRAQRGCWSCLRLPRVEPSQESPKEGKVSDDII
PPADDVTGSPPLDAAIRRLGALQLGDPPGGGAVPGAGPEPGPAHTAAAASAPCWEEELEE
GALFAVTPLQECPHLGAVAPPPPPGDPWGSCCPHPVRPAAAAVRTGCA
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgcgggccggcggctcccccagcagggggcgctgttccaggcgcggcggcgc
gggcgcgcgcggggccggagggcggggctggaggcggagcttcagcagctggatttgggg
gcagaggccacagcccccactgggacaggactggtcagtgatggaggggatggagctgag
catggggacggccgcccccccggggatccggtgctggcggggctgctgcagcgctgcgtc
cctgtgcagtgccgcacagccactgatgaggagctgctgctggtgcacagcccctcgtac
gtggcacgactggagccccccgacagcccccctcagggggggtcaggaccccgccgggct
gtgggggcggcgctggcgctgctggagcaggttctgggggggaacctgcgcaatggggtg
gcgctgatcagctcccaggatgcccaggacccccctgagcccacggctgtggccacgcgg
gtggcgcagaaacacctgggggtgcagcgtgtcctgatcgtggattggagcccccggccc
gggcggagcctcccccagctcttccaggaggaccccagtgtgctatatttcggggctcga
tcgggcctggagccacccccgagcgccgggcaggggcccggagaggggttcagcgtggag
ctgtgctgggagcagcccggtgtcaccgatggggattttgccgctgccgctttccacatc
ctgctgcccatcgccttccagttccagccccagctcgtcctggtcgaggcctcgctggag
gatttgggggggtccctgggggtgtccccggccgggttctctctcctgacccacctgctc
tcggccctggcaagggggcggctgctgctgctgctgcaggggggcccggatttgggggcg
tccccggggggggtgggggccgtgctgcggaccttgctgggggaccccggggaccccccc
gggcccatcacccccacccccagcggcctggccagcatcgcccgcaccctgagtgagcac
cagcgctactggggctgcctgcagagtgacgaggccgaggaggaggaggaagaagaggga
gaggaggaggaaggagaggagggagaggaaggagaggaagaaggtggggaggaagaagag
gaggatgaggaagaggaaaaggaggagctggagggggatgggaaccccccagagacccca
gccagagccagagtggggctggtgtatgacccacggatggaggagcacaggaacacctgg
gacagccagcaccccgagtgcccgcagcgcctggcgcgggtgctgcagcgcctgcaggag
ctggggctcgcccagcgctgcttccgcctgcccgcccggcccgccagcacccggcagctg
cgggcctgccacacccgctcgcatgtgcgggcgctgtcgcggatcccgtctctgtcgcca
cgggcgctgcgcgcactctcgcagcgctacaacagcgtgttcgtgtgcgcgggctcgttc
cactgcgcgcgcctggccgcagggggagcgtgcgcggcggcggcggccgtgctgcgggga
caggtgcgctcggccctggccgtggtgcgccccccaggtcaccacgcctgcccgggctct
gccgggggcttctgcctcttcaacaacgtgggggtggcagcgcggcacgcccagagcctg
gcagggacccccgcccccctcagggtgctgatcctggactgggacgttcaccacggcaac
ggcacccaggagatcttcgaggaggaccccagtgtcctatacgtgtccctgcaccgccat
gacggctccttcttcccggggggtcccggggggtccccgcggcggcgggggaggggcccc
ggctgcggcttcaccctcaacgtgggctggggggggccccgcgtgggggaccccgagtac
ctggcagccctgacccggctggtgctgcccgtggctctccagttcgggccggagctggtg
ctggtgtcggctgggttcgacgcgggccggggggaccccctgggggggtgcctggtgtcc
cctcagaccttcggcctcatgacccacctgctgggggcgctggcgggagggcggctcgtg
cttgtgctcgagggcgggtacaacctggcggtgacagccgagggagtggggcagtgcctg
ggggtcttgctcggggaccccccctcgctgccgccccccgggagcccccagcccgcggca
ctgcgagcgctgagccgcaccctgcgagcccagcggggctgctggagctgcctgcgcctg
ccccgcgttgagccctcccaagagtcccccaaggaggggaaggtcagcgatgacatcata
ccccctgcagatgacgtcacggggtcgccacccctggacgccgccattcgccgcttgggg
gcgctgcagctgggggaccccccggggggcggagctgtgccgggggcggggcctgagcca
ggccccgcccacaccgcagcggccgcgagtgccccctgctgggaggaggagctggaggag
ggggcgctgttcgctgtgacgccgctgcaggagtgcccccacctgggggccgtggccccg
cccccccccccgggggatccctgggggagctgctgcccccaccctgtgcgacctgcggca
gccgccgtgagaactggctgtgcctga
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integrated database retrieval system
