Oncorhynchus mykiss (rainbow trout): 110532843
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Entry
110532843 CDS
T07259
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
110532843 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110532843 (hdac6)
04131 Membrane trafficking [BR:
omy04131
]
110532843 (hdac6)
03036 Chromosome and associated proteins [BR:
omy03036
]
110532843 (hdac6)
Enzymes [BR:
omy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110532843 (hdac6)
Protein phosphatases and associated proteins [BR:
omy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110532843 (hdac6)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110532843 (hdac6)
Membrane trafficking [BR:
omy04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110532843 (hdac6)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
110532843 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
110532843
NCBI-ProteinID:
XP_036844957
LinkDB
All DBs
Position
9:complement(76127987..76169371)
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AA seq
1118 aa
AA seq
DB search
MESVPEPRSVRRSPRTSKSPDNNAAKKESGKTRKKTSNLQETRRRGRMDRSKGEEDIANQ
LNKLDLRNEASATGTGLVFDSMFTHHRCLWDPSHPECPERVSTVMDMVEKQGLLSRCVTV
EARAASNEELHLVHTKEYVDLMRSTQRMDEDQLKTLADSYDSVYIHPESYTCASLAVGSV
LQLVDKVMTSELRNGFSVARPPGHHAQVDQMNGYCMFNNLAIAARYAQTRHRVERVLIVD
WDVHHGQGIQYIFQEDPSVLYFSVHRYEEGLFWPHLPESDSSAVGTGSGEGYNINLPWNK
IGMKDADYVAAFQQLLLPVAYEFQPQLVLVAAGFDSVIGDPKGEMSASPQCFSVLTHMLL
GLAQGKLLLVLEGGYNLQSTAEGVCACLRSLLGESCPRLRSPPIPSDSALKSISRSISAL
YPYWTSLQVLEGGPLSDSDPLNPALTPAESSEELGEELCEERGDSLDLTTGLVYDQRMME
HHNMWDSHHPELPQRIQRIFSHHDDLGLVSRCLRIPARLALEEELALCHSLEHIAKIKAT
EGMKTRDLHRLGDEYNSIFISTESYRSARLAAGACFNAVQAVLTGQVRNGVAIVRPPGHH
AEKDAACGFCFFNSAALTARYAQSISQKPLRVLILDWDVHHGNGTQHIFEEDDSVLYISL
HRYEDGTFFPTSEDAHYNRVGEGKGAGFNVNIPWNGAKMGDAEYLAAFHSVVMPIAREFD
PGLVLVSAGFDAARGDPLGGYQVTPPGYAHLTHLLMGLAGGRVLVILEGGYNLTAISESM
SACTSILLGDPALPLPPLPPPHPNAAVSINEVIRTHSAYWLSLRIQLPESLRLSLPNPKP
RGKRTSKGKKSPRQGNQGGASPGQGSSQTTPQTTPQTTPLPSGDRGDLDLDDLTKGLVSL
DLNQSTSANPSPASVPVGGARSKVRLSPMKSPVVKEVKTEAVPNTPEILQPTPDETETPA
VAMAASDPVTKGDQESGAVEVEGASGYSKEPVFELFCGNQDVDGSTMYVVDPLSWCPHLD
SVRPVPVGGIDVFRPCEDCGTDTENWICLCCYKVYCGRYVNQHMLTHGMASEHRLVLSFA
DLSVWCYSCQAYIHNQMVFEAKNAAHCMKFGEDMPLSN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgtgccagagcccaggtctgtcagacgttcccctcgcacgtcaaagtcaccg
gacaacaacgcagccaaaaaggagagcggcaagacccggaagaagacgagcaacctgcag
gagactcggaggagaggaagaatggacagaagtaaaggagaagaggacatagccaatcaa
ctgaacaagctggatctacgtaacgaggcttcagccacagggactggtctggtgtttgac
agcatgttcacacaccatcgctgtctctgggatcccagccacccagaatgcccagagaga
gtgagcactgtaatggacatggtggagaaacagggactgctgtcccgctgtgttacagtg
gaggcgagggctgcgtctaacgaagagctgcacttagttcacacgaaggagtatgtagat
ctgatgaggtccactcagcgtatggatgaagaccagctgaagacgttggctgactcctat
gactctgtctacatccaccctgagtcatatacgtgtgccagtctggctgtgggctctgtt
ctgcagctggttgataaggtcatgacctcagagctccggaatggattctctgttgctaga
cctccaggccaccacgcccaggtcgaccagatgaatggttactgtatgttcaataatctg
gccatcgcagcgcgctacgcacagacacgccatcgagtggaacgagttctgatagtggac
tgggatgtgcatcacggccaggggatccagtacattttccaggaggatcccagcgttctg
tacttctcagtccacagatatgaggagggtttgttctggccccatctgcccgagtcagac
agcagtgctgtgggcaccggttctggggagggatacaacatcaacctgccctggaataag
attggaatgaaagatgcagactacgttgccgcattccagcagcttcttttgcctgtagcc
tacgagttccagcctcagcttgtcctggtggcagcaggcttcgactctgtgataggggat
cccaagggagagatgtctgccagtcctcagtgtttctctgttctgactcacatgctgctg
ggcctggctcaggggaagttgctgctggttctcgagggaggatataaccttcagtccaca
gcagaaggggtgtgtgcctgtctgaggtcactattgggggagtcctgcccccgcttgagg
tcaccacccatcccgagtgacagtgccctgaaatccatctccaggtcgatctctgctctg
tacccttactggaccagtctgcaggtactggagggagggcctctatcagacagcgacccc
ctgaacccagccctgaccccagcagagagcagtgaggagttaggtgaagagctctgtgag
gagagaggagacagcctggacctgaccacgggcctggtgtacgaccagaggatgatggaa
catcacaacatgtgggacagccaccacccagagcttccccagaggatccagcgtatcttc
tcccatcacgacgacctgggcttggtgtcccgttgcctgaggataccggctcgacttgcc
ttagaggaggagctggctctgtgccacagcttggagcacatagccaagatcaaggccaca
gaggggatgaagacgagggaccttcacagactgggagatgagtacaactctatcttcatc
agtactgagagctacaggagcgcccggttggccgctggggcctgctttaatgcagtacag
gctgttctgacgggacaggtccgtaatggcgtggccatcgtgcgcccccctggtcaccat
gccgagaaggacgctgcctgtgggttctgtttcttcaactccgccgccctgactgcccga
tacgcccagtccatctcccagaagcccctgcgggtcctcatcctggactgggatgttcac
catggcaacggaacacagcacatcttcgaagaggatgacagtgtcctctacatctccctg
catcgctacgaggatgggaccttcttccctacttccgaggacgcgcactacaacagagtg
ggcgaggggaagggagcagggttcaacgtcaacatcccctggaacggagccaagatgggc
gacgcggagtaccttgcagccttccactcggtggtcatgcccatcgctagagagtttgac
ccgggcctggttctggtatcggcagggtttgatgcagccagaggggaccctctaggaggg
taccaagttacccccccgggctatgcccacctcacccacctactgatgggcctggcaggc
ggcagagtattggtcatcctggagggcggttataacctgactgccatttcggagtctatg
tctgcctgcaccagcattctcctgggagaccccgctctgcccctgcctcccttgccccca
cctcaccccaacgcagcagtcagcatcaacgaggtcatacgcacccactccgcctattgg
ctgtccctcaggatacaacttccagagtctctccgtctgtctctgccaaaccccaaaccc
agagggaagaggacttctaagggcaagaagtctcccagacagggtaaccagggcggggcc
agccctggtcaggggtcatctcagaccacacctcagaccacacctcagaccacacctctg
ccctctggtgatcggggcgaccttgacctagatgacctcacaaagggactggtgtcgctc
gacctaaaccaaagtacctcagccaatcccagcccagcgtctgtccctgtgggtggagcc
aggtcaaaggtgaggctcagtcctatgaagagccctgttgttaaagaggttaagacggaa
gctgttccaaatacgcccgagattctccaaccaacgcctgacgagacagagacgccggcg
gtcgccatggctgcctcagacccagttaccaagggagaccaggagagcggtgcggtggag
gtggaaggggcgtctggttactccaaggagccggtgtttgagctgttctgtggaaaccag
gatgtggacgggagcaccatgtacgtggtggatcccctgtcctggtgcccccacctagac
tcagtgaggcctgttcctgttggaggtatagatgtgtttcggccctgtgaggactgtgga
accgacactgagaactggatctgtctctgctgctacaaggtgtactgtggtcgctatgtc
aaccagcacatgttaacccacggcatggcgtcagaacaccggctggtgctgagctttgct
gacctgtcggtctggtgttactcctgccaggcctacatccacaaccagatggtgtttgaa
gccaagaacgctgcccactgtatgaagtttggagaggacatgcccctctctaactga
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