Orcinus orca (killer whale): 101277136
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Entry
101277136 CDS
T05247
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101277136 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101277136 (BARD1)
04121 Ubiquitin system [BR:
oor04121
]
101277136 (BARD1)
03036 Chromosome and associated proteins [BR:
oor03036
]
101277136 (BARD1)
03400 DNA repair and recombination proteins [BR:
oor03400
]
101277136 (BARD1)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
101277136 (BARD1)
Ubiquitin system [BR:
oor04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
101277136 (BARD1)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101277136 (BARD1)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
101277136 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_3
Ank_5
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
RTT107_BRCT_5
zf-C3HC4_3
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
101277136
NCBI-ProteinID:
XP_004262803
LinkDB
All DBs
Position
7:complement(98232677..98317047)
Genome browser
AA seq
776 aa
AA seq
DB search
MQGNRQPRVRSGNEPHPAPAMEPAGRGPWAHSRAALYRLEKLLRCSRCTNILRDPVCLGG
CEHIFCSNCVSDCIGTACPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDTDFSDVKE
ETSRKSLFSDAEYKKNSIKMWFSPRSKKVRYVVSKVSVQTHPPVINDENAQQASMYEFVS
TSPPVDVSERAKKASTKSGKKKKKKTLAEINQKWNLQAEKEDGKLDSEEEFKEKLVSFCS
QPSVIASPQINAKIDLLASGSITKSECSRSLTEVSLPLAEHIESPEIESRNEVVTPEKTL
CENDLTSKKSLPSGHNGKRGRRKRLSSSVSKRCRSSSPSTSGNSIKQTVLSKNMPLPGCS
SPPSKKLKVGDTVRRKSSNILDESISPSPGTPPSTLNSPSYRRMMCSPSAMKLSPSSLMA
MKRNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLL
QHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRSAVNIFGLRPVDYTDSENMKS
LLLLPEKNESSSTSHCSVVNTGQRRDGPLVLIGSGLSSEQQQMLSELAAILKAKKCAEFD
STVTHVIVPGDTVQSTLKCMLGILSGCWILKFEWVKACLQRKEYEQEEKYEIPEGPHRSR
LNREQLLPKLFDGCYFYFGGTFKHHPKDSLIKLVTASGGQILSRKPKPDSDVTQTINTVA
YHAKPDSDQHFCTQYIIYEDLSNHRPERVRQGKVWMASSSWFIDCVMSFELIPLDN
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggaacaggcagccgagggtccgctccgggaacgagcctcatcctgcgcccgcc
atggagccggctggtcgcggcccctgggcccacagccgcgccgcgctctaccggctggag
aagctgctgcgctgctcgcgttgcactaatattctgagggaccctgtgtgtttaggagga
tgtgagcacatcttctgtagtaattgtgtaagtgactgcattggaaccgcatgtccagtg
tgttacaccccagcctggatacaagatgtgaagataaatagacaattggacagcatgatc
cagctttgtagtaagcttcgaaatttgctacatgacactgatttttcagatgtgaaagaa
gaaacatctaggaaaagtttatttagtgatgcagaatataagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtcaggtatgttgtgagtaaagtttcagtgcaaact
catcctcctgtgataaacgatgaaaatgctcagcaggcctccatgtacgaatttgtctct
acaagccctccagtggatgtttctgagagagctaagaaggcttccacaaaatctggaaaa
aaaaagaaaaagaaaactttggctgaaatcaaccaaaaatggaatttacaggcagaaaaa
gaagacggtaaacttgactccgaagaggaatttaaggaaaagctagtatccttctgtagc
caaccatctgttattgctagtccgcagataaatgctaaaatagacttactagcgagtggc
tccataacaaaatctgaatgttctagaagcttaactgaagtctctttaccattggctgag
cacattgagtctccagaaattgagagcaggaatgaagtagtgactcctgagaagactctc
tgtgaaaacgatcttacatctaagaaatccttgccatcaggtcataatgggaaacgtggg
cgtcgcaagagactttccagttctgtttctaagagatgtagaagcagcagtccgagcacc
agtggaaattctattaagcaaacagtgctctcaaaaaacatgccattgcctggatgttct
tcaccaccttcaaagaaacttaaagttggtgacaccgtgaggaggaaaagcagtaatata
ttagatgaatccattagcccttcaccaggtacgcccccttctacactgaatagtccaagt
tacagacgaatgatgtgtagtccctcagcaatgaagctatcgcccagtagtcttatggct
atgaaaagaaatcatcgaggagagactttgctccatattgcttcaattaagggcgacata
ccttctgttgaatacctcttacaaaacggaagtgacccgaatgttaaagaccatgctgga
tggacaccattgcacgaagcctgcaatcatgggcacctgaaggtggtggaattgctgctc
cagcacaaggcgttggtgaacaccactgggtatcagaatgactcacctcttcacgacgca
gccaagaatgggcacgtggatatagtcaagctgttactctcctatggagcctccaggagc
gcggttaacatatttggtctgcggcctgtggattatacagacagtgaaaatatgaaatcg
ctgttgctgctaccagagaagaatgaatcatcatcaactagccattgttcagtagtaaac
actggtcagcgcagggatgggcctcttgtacttataggcagtggactttcttcagaacaa
cagcaaatgctcagtgagcttgcagcaattcttaaggctaaaaaatgtgctgagtttgac
agtacagtaactcatgtcattgttcctggtgatacagttcaaagcaccctgaaatgtatg
cttgggattctcagtggttgctggatcctaaaatttgaatgggtgaaagcatgtctacaa
agaaaagaatatgaacaggaagaaaagtatgaaattcctgaaggaccacatagaagcagg
ctcaacagagaacagctgttgccaaagctgtttgatggatgctatttctattttggggga
accttcaaacaccatccaaaggacagccttattaagcttgtcacggcatctgggggacag
atcctcagtagaaagcccaagccagacagtgatgtgactcagaccatcaatacagtcgcg
taccatgccaaacctgactctgatcagcacttctgcacacagtatatcatctatgaggat
ttgtctaatcatcgcccagagagagttaggcagggcaaagtctggatggcttcttccagc
tggtttatagattgtgtgatgtcctttgagttgatccctcttgacaactga
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