Orcinus orca (killer whale): 101279254 Help Entry 101279254         CDS       T05247                                  Symbol HDAC6 Name (RefSeq) histone deacetylase 6 isoform X1   KO K11407   histone deacetylase 6 [EC:3.5.1.98] Organism oor  Orcinus orca (killer whale) Pathway oor04613   Neutrophil extracellular trap formation oor05014   Amyotrophic lateral sclerosis oor05034   Alcoholism oor05203   Viral carcinogenesis Brite KEGG Orthology (KO) [BR:oor00001]  09150 Organismal Systems   09151 Immune system    04613 Neutrophil extracellular trap formation     101279254 (HDAC6)  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     101279254 (HDAC6)   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     101279254 (HDAC6)   09165 Substance dependence    05034 Alcoholism     101279254 (HDAC6)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:oor01009]     101279254 (HDAC6)   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oor03019]     101279254 (HDAC6)    04131 Membrane trafficking [BR:oor04131]     101279254 (HDAC6)    03036 Chromosome and associated proteins [BR:oor03036]     101279254 (HDAC6) Enzymes [BR:oor01000]  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.1  In linear amides     3.5.1.98  histone deacetylase      101279254 (HDAC6) Protein phosphatases and associated proteins [BR:oor01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      101279254 (HDAC6) Messenger RNA biogenesis [BR:oor03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      101279254 (HDAC6) Membrane trafficking [BR:oor04131]  Autophagy   Aggrephagy    Other aggrephagy associated proteins     101279254 (HDAC6) Chromosome and associated proteins [BR:oor03036]  Eukaryotic type   Histone modification proteins    HDACs (histone deacetylases)     Class II HDACs      101279254 (HDAC6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Hist_deacetyl zf-UBP zf-UBP_var Motif Other DBs NCBI-GeneID:  101279254 NCBI-ProteinID:  XP_012392960 LinkDB All DBs Position X:43702288..43721235 Genome browser AA seq 1149 aa AA seqDB search MTSTGQDSTTTRQRRSRHNPHPPAHDSSVTSVRPQTSKRGVKKGAVLRSSPNLAEVKKKG RMKKLSQAAEQDLVVGLQGLDLNREARTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHA IKEHLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSV YLHPNSYTCACLASGSVLRLVDAVLRAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVA ARYAQQKHDIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLTASNWST TGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVSLEFQPQLVLVAAGFDALQGDPKG EMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPVLEFPG APCPSAQASISCALEALEPFWEVFVRSAETLEEEDTVEGDDVEEKEAEGPWQPPELPILT WPVLQARTGLVYDPQMMDHYNLWDNHHPETPQRIKRIMHHLEELGLAGRCLALPARPATD AELLTCHSAEHVDRLRATEKMKTRELHREGASYDSIYICPSTFTCAQLAAGAACRLVEAV LAGEVLNGIAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAVSGRALRILIVDWDVHHG NGTQHIFEEDPSVLYISLHRYDHGAFFPMGDEGASSQIGQAAGTGYTVNVAWNGPRLGDA DYLVAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGSCQVSPEGYAHLTHLLMGLANGR IILILEGGYNLTSISESMAACTHSLLGDPPPLLTLLRPPLSGALASISETIQVHRRYWCS LRVTKVKDKEGPSSSKLITKKAPQAANPLSAKGMTMPEGNILEAGTGKATSATSVKESTP GQTTSETAVMEFTQDQSSETAMGGAAALNQATSEAATGDATLDQTTSEEAVGGAELIQSP PASCTDNQTPPASPMQGATTQISPSKLTGNLRTLELDKAQEPPEEEELLGEAAGGQDMNE SVLMHVTGDHADTDQAMFYAVTPLPWCPHLVAVCPVPEAGLDVTQPCQDCGALQENWVCL SCYQVYCSRYINAHMLQHHEGSGHPLVLSYADLSTWCYHCQAYVHHKALLAVKNIAHQNK FGENMLHSH NT seq 3450 nt NT seq  +upstreamnt  +downstreamnt atgacctccaccggccaggattccaccacaaccagacagcgaaggagtaggcacaatccc catccccccgcccacgactccagcgtcacctcggtgagaccccagacctcgaagcgaggt gttaaaaagggtgccgtactccgctccagccccaatctagcggaggtaaagaagaaaggc agaatgaagaagcttagtcaagcagccgagcaagacctagtcgtggggctgcaagggctg gatctgaaccgggaggccaggacactgtctggcactggcttggtgttcgatgagcagcta aatgaattccactgcctctgggatgacagcttccctgaaggccctgagcggctccatgcc atcaaggagcatctgatccaggagggcctcctggatcgctgtgtgtcctttcaggcccga tttgccgaaaaggaggagctgatgttggttcacagtctagaatacattgatctgatggag acgacccagtacatgaatgagggggaactccgtgtcctagcagatacctatgactcagtt tatctgcatccgaactcatacacctgcgcctgcctggcctcaggctccgtcctcaggctg gtggatgcagtcctgagggctgagatccggaatggcatggcgatcatcaggcctcctgga caccatgcccagcacagtctcatggacgggtattgcatgttcaaccacgtggctgtggct gcccgctatgctcaacagaagcatgacattcagagggtccttatcgtggattgggatgtg caccacggtcaaggaacacagttcacctttgaccaagaccccagtgtcctctatttctcc atccaccgctacgagcagggtcggttctggccccaccttacagcctccaactggtccacc acaggttttggccaaggccagggatacaccatcaatgtgccttggaaccaggtggggatg cgagatgccgactacatcgccgctttcctgcacgtcctgctgccagtttcccttgagttc cagccccagctggtcctggtagctgctggatttgatgccctccaaggggaccccaagggc gagatggccgccactccggcagggttcgcccagctaacccacctgctcatgggtctggca ggaggcaagctgatcctctcactggagggtggctacaacctccgctccctggctgagggc gtcagcgcctcgctccacacccttctgggagacccttgccccgtgctggagttccctggc gccccttgcccgagtgcccaggcgtctatatcctgtgctctggaagcccttgagcccttc tgggaggtcttcgtgagatcagctgagaccctggaggaggaggacactgtggagggggac gatgtggaggagaaggaggcggagggaccatggcagccccctgagctcccaatcctgacg tggccggtgctgcaggctcgcacagggctggtctatgacccacagatgatggatcactac aacttgtgggacaaccaccaccccgagacgcctcagcgcatcaagcgtatcatgcaccac ctggaggagttgggtcttgccgggcgctgtctcgccctgcccgcacgtccagccacggac gctgagctgctcacctgccacagtgctgagcacgtggatcgtctgcgagccacggagaag atgaagacccgggagctgcaccgcgagggcgccagctatgactccatctacatctgcccc agcaccttcacctgtgcgcagctggctgctggcgccgcctgccgcctggtggaggctgtg ctggcaggagaggttttgaatggcattgctgtggtacgtccccccggccaccatgcagag cgggatgccgcttgcggtttctgcttcttcaactctgtggctgtggctgctcgccatgcc caggccgtcagtgggcgtgcgctgcggatcctgatcgtggactgggacgtccatcatggt aatggaactcagcacatatttgaggaggaccccagcgtgctgtacatttctctgcaccgc tatgatcatggcgccttctttcctatgggggacgagggcgccagcagccagataggtcag gctgcaggcacgggctacaccgtcaacgtggcctggaatgggccccgcttgggtgacgcc gactacctggttgcctggcatcgtctggtgcttcccattgcctatgagtttaacccagaa ctggtgctggtctcagctggctttgatgctgcccggggggacccactgggcagctgccag gtgtcgcctgagggctatgcccacctcacccacctgctgatgggcctggccaatggccgc attatccttatcctagagggtggttataacctgacatccatctcggagtccatggccgcc tgcacccactccctccttggggacccgccacccctgctgaccctgctgcggcccccactg tcaggggccctggcctcgatctccgagaccatccaagtccatcgcagatactggtgcagt ttgcgggtcacaaaggtcaaagataaagagggaccctccagttctaagttgatcaccaag aaggcaccccaggcagccaatcctttgtcagccaaggggatgaccatgccagaagggaac attctggaggcaggcacagggaaggccacctcagcaacatctgtgaaagagtccactcca ggccagactacgtcagagacagctgtgatggagttcactcaggaccagtcatcagagaca gccatgggaggagctgctgcgctgaaccaggccacctcagaggcagccacaggggatgcc acgctggaccagaccacctcggaggaggctgtggggggagctgagctgatccaaagccct ccagcctcatgcactgacaatcagactcctccagcgtcacccatgcaaggagccacaacc cagatatcccccagtaaactgactggaaatctcaggaccttggaactagacaaggcacag gaacccccagaagaggaggagctactaggagaggcagctggaggtcaggacatgaatgag tcagtactgatgcatgtcactggagaccatgctgacactgaccaagccatgttttatgct gtaacaccactgccctggtgtccccatttggtggcagtatgccctgtacctgaagcaggc ctggatgtgacccaaccttgtcaggactgtggagccctccaggagaactgggtgtgtctg tcttgctaccaggtctactgcagtcgttacatcaatgcccatatgctccaacaccatgaa ggctcgggacacccgctggtactcagctacgccgacctgtctacctggtgttaccactgt caggcctacgttcaccacaaggctctcctagctgtgaagaacatcgcccaccagaacaag tttggggagaacatgctccactcacactaa

DBGET integrated database retrieval system