Planktothrix agardhii: NIES204_23180
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Entry
NIES204_23180 CDS
T05658
Symbol
crtH
Name
(GenBank) cis-carotene isomerase
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh00906
Carotenoid biosynthesis
pagh01100
Metabolic pathways
pagh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
NIES204_23180 (crtH)
Enzymes [BR:
pagh01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
NIES204_23180 (crtH)
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
Thi4
FAD_oxidored
Pyr_redox_2
HI0933_like
FAD_binding_3
GIDA
GDI
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
BBD55018
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Position
complement(2637919..2639463)
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AA seq
514 aa
AA seq
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MPVSNLSQSFARSSSDSDQEFDVIVIGSGIGGLVTATQLAAKGAKVLVLESYIIPGGSSG
YFERDGYRFDVGASMIFGFGDKGTTNLLTRALEAVDVTLETIPDPVQIHYHLPNDLKLRV
HRDYEKFLQELITRFPQEEKGIRKFYDQCWKVFNCLNSMELLSLEEPRYLMRVFFQEPRS
CLGLVKYLPQNVGDIAKRYINDPELLKFIDIECYCWSVVPADLTPMINAGMVFSDRHYGG
INYPKGGVGQIAIKLVEGLEKFGGQIQYKARVKQIILENGIAVGVELIDGKVYRGKRIVS
NATRWDTFGKLIPSDSIPKAEKKWRERYQKSPSFLSLHLGVEASVLPPETDCHHIIVENW
DKMEEPEGTIFVSIPTLLDPSLAPEGYHIVHAFTPSWIDDWQKLPEFEYEAKKEQAAGRI
IDRLEILFPGLDAGLDYMEVGTARSHRRFLNRQDGTYGPIPAYKLKGLLGMPFNRTSIRG
LYCVGDSTFPGQGLNAVAFSGFACAHRVAVDLGL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtttctaacctatcccagtcttttgctcgatctagttctgactccgatcaggaa
tttgatgtgattgtcattggttctggtattgggggactggtgacggcgacccaattggcg
gccaagggtgcaaaagttcttgtcctagaaagctatattatcccgggcggcagttctgga
tattttgaacgggacggatacagatttgatgtcggtgcatccatgatttttggatttggg
gacaaaggaaccaccaacctcctaacccgcgccctggaagctgtggacgtcaccctagaa
accattcccgatccggttcaaattcattatcacctacccaatgatctcaaattacgggta
catcgagattatgagaagtttttgcaagaactaattactcgcttcccccaggaagaaaaa
ggaattcgtaaattttatgatcaatgctggaaggtctttaactgtctgaactccatggag
ttgctatctttggaagaacctcgttatttaatgcgggtatttttccaagaaccgagatca
tgtttaggattagttaagtatttaccccaaaatgtcggagatattgccaaacgttatatt
aatgatcctgaacttttaaagtttattgatattgaatgttactgctggtcagtggttccg
gctgatttaaccccgatgattaatgctggaatggtattttccgatcgccattatggagga
attaattatcccaaaggaggcgtcggtcaaattgcgatcaaattagtcgaaggattagaa
aaatttggtggacaaattcaatataaagctagagtcaaacaaattatattggaaaacgga
atagccgttggagtagaactaattgatggtaaagtttatcgaggcaaaagaatagtttct
aatgccacccgttgggatacctttggcaaattaattccctccgactctattccaaaggct
gaaaaaaaatggcgagaacgctatcaaaaatcccctagtttcttgagtctacatttagga
gtagaagcctcagtcttacctccagaaaccgattgtcaccatattattgtcgaaaattgg
gataaaatggaggaacccgaaggcacaatttttgtgtccattccgactttattagatcca
agtttagccccggagggctatcatattgttcatgcttttacccctagttggatcgatgat
tggcaaaaattacccgagtttgaatatgaagccaaaaaagaacaagctgcgggcagaatt
attgaccgtttagaaatacttttccccgggttagatgccgggttagattatatggaagtg
ggaacggcgcgatcgcatcgtcgctttttaaaccgacaggatggaacctacggccccatt
cccgcctataaattaaaaggacttctgggaatgccctttaaccgcacatctatccgaggg
ttatattgtgtcggtgatagcactttccccggccaaggattaaatgctgttgccttctcc
ggcttcgcctgcgcccatcgggtagccgttgatttgggactttaa
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