Prionailurus bengalensis (leopard cat): 122476850
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Entry
122476850 CDS
T07574
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pbg
Prionailurus bengalensis (leopard cat)
Pathway
pbg04613
Neutrophil extracellular trap formation
pbg05014
Amyotrophic lateral sclerosis
pbg05034
Alcoholism
pbg05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pbg00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
122476850 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
122476850 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122476850 (HDAC6)
09165 Substance dependence
05034 Alcoholism
122476850 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pbg01009
]
122476850 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbg03019
]
122476850 (HDAC6)
04131 Membrane trafficking [BR:
pbg04131
]
122476850 (HDAC6)
03036 Chromosome and associated proteins [BR:
pbg03036
]
122476850 (HDAC6)
Enzymes [BR:
pbg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122476850 (HDAC6)
Protein phosphatases and associated proteins [BR:
pbg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122476850 (HDAC6)
Messenger RNA biogenesis [BR:
pbg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122476850 (HDAC6)
Membrane trafficking [BR:
pbg04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122476850 (HDAC6)
Chromosome and associated proteins [BR:
pbg03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122476850 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
122476850
NCBI-ProteinID:
XP_043425634
LinkDB
All DBs
Position
X:42782944..42806169
Genome browser
AA seq
1178 aa
AA seq
DB search
MEKRTSSTRCPAGRQTFRSVSHGRSLRKGPRPNRVRGEVSPTMTSTGQDSTSTRQRRSRH
NPHSPPHDSSVTSKRGVKKGAILSSSPSLAEVKKKGRMKKLSQAAEQDLIMDLRRLDLNL
EAKTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEK
DELMLVHSLEYIDLMETTQYMNERELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAV
LGKEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVDWDVHHGQ
GTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGHGQGYTINVPWNQVGMRDAD
YIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTPAGFAQLTHLLMGLAEGKL
ILSLEGGYNLRSLAEGVSASLHTLLGDPCPILESPGAPCPSALASLCCALEALEPFWEVL
VRSVETPEEDILEEDSTEEKDEEGLWRPPALPILTWPMLQARTGLVYDQRMMGHHNLWDN
HHPEMPQRVLRIMQRLEELGLAGRCLALPARPATEAELLTCHSAEYVGRLRATEKMKTRE
LHREGSNFDSIYICPSTFACAQLATGAVCRLVEAVLAGEVLNGTAVVRPPGHHAERDAAC
GFCFFNSVAVAARHAQAISGQALRILIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGT
FFPMGEEGASSQIGRAAGTGFTVNVAWNGPRVGDADYLAAWHRLVLPIAYEFNPELVLVS
AGFDAAWGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEGGYNLTSISESMAACTRSL
LGDPPPLLTLSRPPLSGALASITETIQVHRRYWRSLRVMKVEDKEEPSLSKSVTNPGSAK
RMTTPEGNILDAGTEKAVSASSVEESTLGQPKSETAMVELSQDQSLEAPTQKAMLDQTTS
QAATVEATAGQTTSEEAVGGAEMIQTPPALCTDNQTPTASPEQGATSQISPSELIENLRT
LELNCKAQEAPESQIPEEDKLLGEAAGGQDMLIQSFGVHANTDQAIFYAVTPLPWCPHLV
AVCPTPESGLDVTQPCQDCGTLQENWVCLSCYQVYCGRYVSAHMLQHHEGSGHPLVLSYA
DLSTWCYSCEAYVHHQALLEVKNIAHQNKFGEDMPHSH
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcggacctcaagcactcgctgcccggcgggtcgccagacatttcgcagcgtg
agccatgggcggagtttgagaaaagggccgcgcccaaaccgcgtcaggggtgaagtctcc
cccaccatgacctccacgggccaggattccacctcaaccaggcagcgaaggagtaggcat
aacccccattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaagggt
gccatactctcctccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaag
ctcagccaagcagcagagcaagacctaatcatggacctgcgaaggctggatctgaacctt
gaggccaagacactgtctggcactggtttggtgttcgatgagcagctaaatgaattccac
tgcctctgggatgacagcttccctgaaggccctgaacggctccatgccatcaaggaacag
ctgatccaggagggcctcctggaccgctgtgtgtcctttcaggctcgatttgctgaaaag
gacgaactgatgttggttcacagcctagaatacattgatctgatggagacgacccagtac
atgaatgagagagagctccgcatcctagcagacacctatgactcagtttatctacatccg
aactcctatacctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgctgtc
ctggggaaggagatacggaatggcatggccatcatcaggcctcctggacaccacgcccag
cacagtcttatggatgggtattgcatgttcaaccacgtggccgtggctgcccgctacgct
caacagaagcatgacattcagagggtccttatcgtggattgggatgttcaccacggtcaa
ggaacccagttcacctttgaccaggaccccagcgtcctctatttctccatccaccgttat
gagcagggtcggttctggccccaccttaaggcctctaactggtccaccataggttttggt
catggccagggatataccatcaatgtgccttggaaccaggtggggatgcgagatgccgac
tatattgctgctttcctgcacctccttctgccggtcgcccttgagttccagccccagctg
gtcctggtggccgctggatttgatgcccttcaaggggaccccaagggcgagatggccacc
actccagcagggttcgcgcagctaacccacttgctcatgggtctggcagaaggcaaactg
atcctgtctctggagggtggctacaaccttcgctccttggctgagggtgtcagtgcctca
ctccacacccttctgggagacccttgccccatactggagtcccctggcgccccctgccca
agtgccctggcgtcactgtgctgcgctctggaagccctggagcccttctgggaggtcctt
gtaagatcagttgagaccccggaggaggacatcctggaggaggatagcacagaggagaag
gatgaagagggactgtggcggcccccagcgctcccaatcctgacgtggcccatgctacag
gctcgcacagggctggtctatgaccagcggatgatgggtcaccacaacttgtgggacaac
caccacccagagatgcctcagcgagtcttacgaatcatgcagcgtttggaggagctgggc
cttgcggggcgctgccttgcactgcccgcacgtcccgccacggaagccgaactgctcacc
tgccacagtgctgagtacgtgggtcgtctgcgggccacagagaagatgaaaacccgggag
ctgcaccgcgagggttccaactttgattccatctacatctgccccagcacctttgcctgt
gcgcagctggccactggcgccgtctgccgcctggtggaggctgtgctggcaggagaggtt
ttgaatggtaccgctgtggtgcgtcccccaggacaccatgctgagcgggatgccgcttgt
ggtttctgcttttttaattctgtggctgtggctgctcgccatgcccaggccatcagtggg
caggcgctgcggatcctgatagtggactgggatgtccatcatggtaatggaactcagcac
atatttgaggaggaccccagcgtactgtacatttccctgcaccggtatgaccatggcacc
ttctttcccatgggggaggagggtgccagcagccagataggccgggccgcaggcactggc
ttcactgtcaacgtggcctggaatggaccccgtgtgggtgacgctgactacctggccgcg
tggcatcgcctggtgcttcctattgcctacgagtttaacccagagctggtgctggtctca
gcgggctttgacgccgcatggggggacccactggggggctgccaggtgtcacctgagggc
tatgcccacctcacccacctgctgatgggccttgccaatggccgcattatcctaatccta
gagggtggctataacctgacatccatctcggaatccatggctgcctgtacccgctccctc
cttggggacccaccaccactgctgaccttgtcgcggcctccactatcaggggccctggcc
tcaatcaccgagaccatccaagtccatcgcagatactggcgcagcttacgggtcatgaag
gtggaagacaaggaggaaccctccctttctaagtcagtcaccaaccctgggtcagctaag
aggatgaccacaccagaagggaacattctggatgcaggcacagagaaggctgtctcagca
tcatctgtggaagagtccactctaggccaacctaagtcagagactgctatggtggagctc
agtcaggaccagtccttggaggctcccacacagaaagccatgctggaccagaccacctca
caggcagccacagtggaggccacagcaggccagaccacctcagaggaggctgttggggga
gctgagatgatccaaacccctccagctttatgtactgacaaccagactcccacagcctca
cctgagcaaggtgccacatcccaaatatcccccagtgagctgattgagaatctcaggacc
ttggaactaaactgcaaggctcaggaggcaccagaatctcagatcccagaagaggataag
ctactgggagaggcagctggaggtcaggacatgctgattcagagctttggggtccatgct
aacactgaccaggccatcttttatgccgtgacaccgctgccctggtgtccccatttggtg
gcagtatgtcccacacctgaatcaggcctggacgtgacccaaccttgtcaggactgtgga
acactccaggagaactgggtgtgtctgtcttgctatcaggtctactgtggtcgttatgtc
agtgcccatatgctgcaacaccacgaagggtcaggacacccgctggtcctcagctacgcc
gatctgtctacctggtgttacagctgtgaggcctatgtccaccaccaggctctcctagaa
gtgaagaacatcgcccaccagaacaagtttggggaggacatgccccactcacactga
DBGET
integrated database retrieval system
