Polistes canadensis: 106790039
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Entry
106790039 CDS
T05611
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pcf
Polistes canadensis
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcf01009
]
106790039
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcf03019
]
106790039
04131 Membrane trafficking [BR:
pcf04131
]
106790039
03036 Chromosome and associated proteins [BR:
pcf03036
]
106790039
Enzymes [BR:
pcf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
106790039
Protein phosphatases and associated proteins [BR:
pcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106790039
Messenger RNA biogenesis [BR:
pcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
106790039
Membrane trafficking [BR:
pcf04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
106790039
Chromosome and associated proteins [BR:
pcf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
106790039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
106790039
NCBI-ProteinID:
XP_014610165
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MSQTGLEGNFFDAVRQLAESEIELIKVIEESTMNRQKNTTDMKSSTKKKNIKKSPKLSNV
KTQPSAALLAAKQEAAQRKILQNKKSNTNFVYDIYQKIRDAYAVVRKETGIVYDRSMEDH
KCLWDENYPECPERLTRTLERCDELGLLNRCKLIQPRFCTENDILQMHTQKQIDILKETS
GSMDLDKLETLSSKYDAIYVNPSTFKLSLLAVGSTINLIESICKGDIQNGMAIIRPPGHH
AMKSEYCGYCFYNNVAIAAKKALNDNLANKILIVDWDVHHGQATQQMFYDDSRVVYFSIH
RYENGTFWPNLEESDFHYIGEGLGEGYNFNIPLNKTGMTNADYIAIFQQVLLPMAYEFQP
DLIIVSAGYDAALGCPEGEMEITPACYAHLLSSLLSLAGGKIAIILEGGYCLKSLAESAA
LTLRTLLGDPCPMLQTLQSPSLSVRDTILNSIYAHKQYWKCYQYQEQYSINNRIVRKEGN
NDQHLPIVNYTGEVYKPDFYDTRNCYPIQNKDIFEALDKRLDSLIKSTNLFKAPNKVCIV
YDNRMLKHCDAVNNTHPEKPNRIVSIYKKHEEHGLLERCYLQQGRVATEEELLLAHSQDY
INAIKKTETFKSKELERQASKYNSVYLHNETWFSACVSAGSLLQIVDNVLNGEAQSGVAV
IRPPGHHAEPNSACGFCIFNNIAIAAKYALNIHNIKRILIVDWDVHHGNGTQFIFENDPS
VLYTSIHRYDNGNFFPHSKQGNYTSVGLGSGEGYCVNIPWNKKGMGNAEYIAAFQQVVMP
IAYQFNPELVLVSAGFDACIGDPLGGCTVTPEMYGHLTHWLSSLANGRVILSLEGGYNIN
SISHSMAICTKALLGDPLPLLDASLIPCSSAIHSINNVLKVQKKYWSSLMFNLSLPKENL
KKIATNIKMNDQIKNFQFNQHSESKIALEGIESEKLDIKHAFNKYSMNKISGEEILKLQN
EIKNIKIRDSKIAKEEKTIEIARACVNKDQRKEGDRKETAGSSNNPGNSNDSGENRGALD
EAAATNLTDFLSDNWQALTDRKMFAVIPLKECPHLNTVNNVPPCGIDIHLPCIECNSKTE
NWICLQCYTVHCARNINQHALLHSDETLHPLTLSFSDLSVWCYGCSAYIDNPRLYAARNA
AHLSKFNQEAPWIYGVQ
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaccggactagaagggaatttttttgatgctgtgcggcaactggcagagagt
gaaattgaacttatcaaagttatcgaggaatctactatgaatcgtcaaaagaatactaca
gatatgaaatcgtcaactaaaaaaaagaatatcaagaaatcacctaaactctctaatgta
aagactcaaccatctgccgctttattggcagctaaacaagaggcagcgcaacgcaaaata
ttacaaaataaaaaatcaaatactaattttgtatatgacatttatcaaaaaataagagat
gcatacgctgttgtgcgtaaagaaactggtattgtttatgatcgttctatggaggatcat
aaatgtttgtgggatgaaaattatccagaatgtccagaaagattaacaaggaccttagaa
agatgtgatgagttaggattattaaacaggtgcaaattaattcaaccaagattttgtaca
gaaaatgatatacttcaaatgcatacccaaaaacaaatagacattttaaaagagaccagt
ggatctatggatttggataaattagaaacactatcttctaaatacgatgctatatatgtt
aatccatccacttttaaattatctttactggctgtcggctcaacgataaatttgatagaa
agtatttgtaagggtgatatacaaaacggcatggctattatcagaccacctgggcatcac
gcgatgaaatctgaatattgtggatattgtttctataataatgtggctatcgcagcaaaa
aaagctttaaatgataatttagctaacaaaattcttatcgttgattgggacgtacatcat
ggacaagcaactcaacaaatgttttacgatgattcacgtgtagtttatttttcaatacat
cgttatgaaaatggaacattctggcctaatttagaagaatctgattttcattacatcggc
gaaggcttgggagaaggttacaattttaatataccacttaacaaaactggcatgacaaat
gctgattatattgcaatatttcaacaagttttgttaccaatggcttacgagtttcaacca
gatctcataatagtatcagctggttatgatgcagcattgggatgcccagagggtgaaatg
gagataacacctgcatgttacgctcatctattgtcgtccctattgagtttagcagggggg
aagatagcgattatattggagggtggttattgtctaaagtcattggctgaaagcgctgca
ttaactctgcgaacattactaggcgatccatgtcctatgttgcaaacattgcaatcaccg
tcattaagtgtacgtgacacaattttaaatagcatctatgcccacaaacaatattggaag
tgttatcaatatcaagaacaatatagtattaataacagaattgtcagaaaagaaggaaat
aatgatcaacatttgcccattgttaattacaccggagaagtgtataaaccagatttttac
gacacacggaattgttatcctattcaaaataaagacatttttgaagcattagataagaga
ttagattcattgataaaatctacaaatttattcaaagcacctaacaaagtatgcattgta
tatgacaacagaatgttgaaacattgcgatgccgttaataacacgcatcctgaaaaacct
aatcgaatcgtaagcatttataagaaacacgaagagcatggtttattagaacggtgctat
ttacaacaaggaagagtggctacagaagaagaactactattagctcattcgcaagattat
attaatgcgataaaaaagacggaaacatttaaatctaaagaattggaaagacaagcatcc
aaatataattctgtttatttgcataacgaaacatggttttctgcttgcgtatctgctggt
tcattacttcaaattgtggacaatgtattaaatggagaagcgcaatctggagtcgcggta
ataagacctccaggacatcacgcggaaccaaattcagcttgtggtttttgtatttttaat
aatattgcaatagcagcaaaatatgctttaaatattcataatataaagaggatattaata
gtagattgggatgtacatcatggaaatggtactcaatttatttttgaaaatgatccaagc
gtgctgtatacatctatccatcgttatgacaatggaaatttttttccacattctaagcaa
ggcaattacacatctgttggattaggatcaggagaaggttattgcgtaaatataccatgg
aataaaaaaggaatgggaaatgcagaatatatagctgcatttcaacaagttgtgatgccg
attgcttatcaatttaatccagaattagttctagtttctgcaggctttgatgcttgtatc
ggagatccgttagggggatgtacagtaacaccagaaatgtatggacatttaacgcattgg
ttatcttcattggcgaatggacgtgttattcttagcttagagggcggttacaatataaat
tccatttctcattcaatggcaatatgtacaaaagcattactcggtgatccattacccttg
ctagacgcttcgttaataccgtgttcaagtgcaatacattctataaataacgtactcaaa
gtgcagaagaaatattggtcgagtttaatgttcaatttatcgttgcctaaagaaaatctc
aaaaaaattgctactaatattaagatgaacgatcaaattaaaaattttcaattcaatcaa
cattcggagtcgaaaattgccttggagggtatagaaagtgaaaaattggatatcaagcat
gcgtttaataaatatagtatgaataaaatatcgggcgaagaaatattgaaacttcaaaat
gagataaaaaatattaaaataagggattctaaaattgcgaaggaagaaaaaactatagaa
attgctagggcgtgtgtaaataaggatcaacgaaaagagggagatagaaaagagactgca
ggaagttctaataatccaggaaatagtaatgattctggagaaaatagaggagctcttgat
gaagctgcagcaacaaatttgaccgattttctttctgataactggcaggcattaacagat
aggaaaatgtttgctgttataccattaaaagaatgcccacatttaaataccgttaacaat
gtacctccttgcggtattgatatacatttaccatgcatcgaatgtaatagtaagactgaa
aattggatttgtctacaatgttacactgtacattgtgcaagaaatatcaatcagcatgca
ttgttacattccgatgaaactttgcatcctttgactttaagttttagcgacttgtcagtt
tggtgttatggatgctcagcttatattgataatccgagattatacgcggctcgaaatgct
gcgcatctgagtaaatttaatcaagaagcaccatggatttacggggtacaatga
DBGET
integrated database retrieval system
