Paraburkholderia caledonica: CUJ87_30830
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Entry
CUJ87_30830 CDS
T05740
Name
(GenBank) dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
pcj
Paraburkholderia caledonica
Pathway
pcj01502
Vancomycin resistance
pcj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CUJ87_30830
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CUJ87_30830
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcj01002
]
CUJ87_30830
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcj01011
]
CUJ87_30830
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pcj01504
]
CUJ87_30830
Enzymes [BR:
pcj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
CUJ87_30830
Peptidases and inhibitors [BR:
pcj01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
CUJ87_30830
Peptidoglycan biosynthesis and degradation proteins [BR:
pcj01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
CUJ87_30830
Antimicrobial resistance genes [BR:
pcj01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
CUJ87_30830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
VanY
DUF3136
Motif
Other DBs
NCBI-ProteinID:
AXF18771
LinkDB
All DBs
Position
pPHRS4:complement(33769..34509)
Genome browser
AA seq
246 aa
AA seq
DB search
MADNFESFHWAVPHSDPVRLVISLSDPVVASVPVIDVGEQFVDLGDTGDLVLVDRTRSVV
SNSSKHFLKVRVGIAKRLMFAAEMLSVKGLRLLVKEGYRPLSLQRSYFDHRLSKLRTEYP
SAPDALLIELTSRYAAPPEVAAHPTGAAVDLTLATREGVELDMGSVLNATDEESSGACYT
ACQFISRQAQGNRQLLATAMIAAGFVNYPSEWWHWSYGDRYWAVISDEPRAIYGPVEEER
LEGARG
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atcgctgacaatttcgagtcattccattgggccgttcctcactcggatccagttcgtctc
gtgatttcactttccgaccctgtagttgcgtccgtcccggttatcgacgtgggcgaacag
tttgtcgatctgggcgacaccggcgatctggtgctagtggaccgcacgcggagcgtcgtc
tctaactcgagcaaacattttctgaaggttcgcgttggtatcgccaaacggctaatgttt
gcagcggagatgctttcagttaaaggcctgcgattgttagtcaaggaaggataccggccg
ctgtcgcttcagcggagctacttcgaccatcgtctgtcgaagctccgaacggaatacccg
tccgcgccggatgctcttttgatcgaactgacaagtcgctatgccgctccccctgaagtg
gccgcccatccgacgggcgcggccgtcgacttgacgcttgcgacgcgcgagggtgtcgag
ctcgatatgggaagcgtgttgaacgccaccgatgaagagtcatcgggtgcgtgttacaca
gcctgtcagttcattagccggcaggcgcagggcaaccgtcagttgttggcgacggctatg
atcgccgcgggtttcgtcaactatccctcggaatggtggcactggtcctacggcgaccga
tactgggcggtaatttctgatgagccacgtgccatctacggcccagtagaggaagagcgt
ctggaaggagcacgcggatga
DBGET
integrated database retrieval system
