Procambarus clarkii (red swamp crayfish): 123759429
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Entry
123759429 CDS
T07930
Name
(RefSeq) histone deacetylase 6-like isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcla01009
]
123759429
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123759429
04131 Membrane trafficking [BR:
pcla04131
]
123759429
03036 Chromosome and associated proteins [BR:
pcla03036
]
123759429
Enzymes [BR:
pcla01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
123759429
Protein phosphatases and associated proteins [BR:
pcla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123759429
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
123759429
Membrane trafficking [BR:
pcla04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123759429
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
123759429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
123759429
NCBI-ProteinID:
XP_045600455
LinkDB
All DBs
Position
LG03:31642542..31707011
Genome browser
AA seq
2025 aa
AA seq
DB search
MGDKKNSLPPLRKNSKKGQKPQTQGAGGVEGGNGELGEAGQTSKNRKLAAIRPRISIEEL
RNVFKRQASLSQEGGDPIFDPMAKAQEAMKMVRGKTGVVYDESMTKHRCLWDEKNPECPE
RLLCALDRCKELGLLSRCEHLVPRAATEEEVLKMHSPTHLALLWSTKGETDKSKLEELSS
HFDSIYLHPSTYETSLLAAGCAIDLVDAVASGRLQNGFAIVRPPGHHAMESEMCGFCYIN
NAALAARHALEKHGLSRILIVDWDIHHGQASQYAFYSDPRVLYFSIHRYENGSFWPHLRE
SNYNYIGEGAGLGFNFNVPLNKTGMRNEDYLAIFHQILLPVAYEFSPDLIIVSAGYDGAI
GCSEGEMEVSPGFYAHLTSSLMTLAQGRVAVIFEGGYCLDSLAEGTAMTLSALLGDSCPV
LLDPIMEPSPSLRESLLNLIYVQRAYWKCFQYQGSFSTREESSESIKDRHTPSLTFFGHD
VRPLTFQTRDIHNEQSSEFLERIRLKLTQLKQKERTKPVPKNRLCLVYDEEMSNHKSLSE
LEHPERPERTKKIWEYLKRYGIIERASILQSRRATREEVTLVHTTDHVDFMFNMGSLSDE
ELKSLQDKYKSIYFHSMSNDAALLAVGSLLQVVDSVCSGMTAGGIGVVRPPGHHAERNHP
YGFCFYNNVAVAAKYALKQYGYQRVLILDWDVHHGNGIQHSFESNPQVLYISIHRYDHGL
FFPSSEDANYDQVGTGAGEGYNVNIPWNKVPRQERLVSGMGDAEYISVMLQVVLPIAYQY
DPQLVLVSAGFDAARGDPLGGCHVTPECYGHMTHLLSSLAGGKIVMALEGGYNLNTISYC
MTMCAKALLGDPLPMLDASLVPNKGAVQTINDVIKTHSKYWSALSFQVELPLEDVLCQGF
GGGAQAVESGASGSEASSSSTTSPVSTPSTSTPPFITAPSSPEKTKEKILCDGAASILVG
FNETETKSHSEKMEVNSSPQVSVRSRTADKENLSVDRKKNGIKNAKGSDINLNAVKAPPQ
TKINQSSASRQSKKPSGRSGKQEADSVRQKISRTPTRSRRSLGEGALRAAADSIDKIKRS
TAIISNEEYCEISSGEYMQGPGNIKAIIERCSELQLLETCTRLQPRPATEAEILAVHKEE
TLKNIPGGTRKGIYHPVIGDDILTAAGSTVELIQEIVLGKAQNGLAIIQSSGHLVSENNA
TPNTHLNNTAIGVRFALDNLGLSRVLIIDWDGQHEINTQHLFYGEPRVLVFSMHLHSNQH
PEENVAGETGELEDDSYNFNVKLNCPIFRSEDYYSVFHQLLLPVAYEFSPELVIISAGYE
LSLHSGHFHPVIYSHLTGLLMPLAQGKIAVIIEVGRCKNPLAEGVAATLRVLKDEPSEPM
AFPTSDYSSEAKQAIINVISAQRAKWGSLMRHAQTSAVACKPKVNSSPIIKPQEEHYFQL
QRLGGNIPRPKHTVCLVYDDLMMEHFNYEDETYPERPERISSIYKCLQEFGIVGRCHQIK
ARIASESELETVHSSKHINFMSSLNAKKPQDLQYLQNKYDSIYLHRRTNNTALLAAGSLV
AVVDSVVSGESHRGVAVIRPPGHHAERNKPYGFCFYNNVALAAKHAINTHGLQRILILDW
DVHHGNGIQHMFESDPQVLYISIHRYDNGKFFPGTSAGNYDRVGTKEGKGYNVNIPWNKG
GMGDGDYMAAMVQVVLPIAYQFKPQLVLVSAGFDCAVGDPLGGCNVTPECFGHMTKMLTC
LAEGRVIIALEGGYNLNSISYCMTMCVKALLGDPLLPLAQNLMPCTSAIESLASVVDVHR
KFWSALNFKDEALSAVGLTPTCPKLNVAHSPSKKSSEGTFTGLEDLTNSFSRVKLEDTNT
GTATATAALDETSVTLGSKNQEEDIGAVGGAYGSSAVSNMSTFLLSDFAAGKQTYAVVPI
TWCPHLEEVHPVPSSGLKTGSPCEECHDPSENWVCLTCYKVLCGRFVSEHMMLHGLMHEH
KMVLSFTDLSVWCYACDVYVHHPILEEAKRSAHLDKFGEDIPGFS
NT seq
6078 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaagaaaaattctctcccaccgctaaggaagaactcgaagaaaggccaaaag
ccacaaactcaaggtgctgggggagtggaaggaggcaatggcgaattaggtgaagctggg
cagacttcaaagaaccgtaaattagctgctattcgacctcgcatttcaattgaagaactg
aggaatgtgttcaaacggcaggcatctcttagtcaggaaggaggggaccctatcttcgac
cccatggctaaggctcaagaagctatgaaaatggtccggggaaagacgggcgtggtatac
gatgagagcatgaccaagcaccgctgtctctgggacgagaaaaacccggaatgtcctgag
aggctactatgtgctctggacaggtgcaaagagctgggactgcttagtcggtgtgagcac
ttggtgcctcgtgctgcaacggaagaggaagtattgaagatgcattcccctacacacctt
gccctcctgtggagtaccaagggggagactgataaaagcaaacttgaggaactctcctct
cattttgattccatttaccttcatccatcaacctacgagacgtcgcttcttgctgctgga
tgtgctatagatctagtggatgctgtagcttcaggaagattacaaaatggctttgctatt
gtcagaccacccggccatcatgctatggagtcagaaatgtgtgggttctgctacataaac
aatgcagcgttggcagctcggcatgccttggagaagcatggattgtcacgcatcctcata
gttgactgggacattcaccatgggcaggcatcacaatatgcattttactcagatcccagg
gtgctctacttctctattcaccggtatgagaatgggagcttttggccacacctacgggaa
agcaactacaactatataggtgaaggagccggcctggggttcaacttcaatgttccactc
aacaaaactggcatgaggaatgaagactacttagccattttccatcaaattcttcttcct
gtggcttatgagttcagccctgacctcatcatagtatcagcaggatatgatggtgcaatt
ggatgttcggagggagagatggaagtgtcaccaggtttctatgcccacctcacctctagt
ctaatgacactggctcagggaagagtggcagtaatttttgagggaggatattgcttggac
tccttagcagagggtacggcgatgacgctcagtgcgctacttggtgactcgtgtcctgta
ttgctggatccaatcatggaaccttctcccagcttgcgtgagtcacttctgaatcttatc
tacgttcaacgagcatattggaaatgtttccagtaccaggggtcattttcgacacgagaa
gagtccagcgagtccatcaaagacagacatacgccttctctaacattttttggacacgat
gtcagacctctcacatttcaaacaagagacatccataatgagcaatcatctgagtttttg
gagagaattaggttaaaactgactcagttaaaacaaaaagagaggactaaacctgtccca
aaaaataggctctgcttggtatatgatgaagaaatgagtaatcacaaaagcttgtctgag
cttgaacatccagaaagacctgaaaggacaaaaaaaatctgggaatacttgaagcgttat
ggcatcatagagagagcatcaattcttcagtcgcgacgagcaactcgggaagaagtgaca
cttgtacacaccacagaccacgtggacttcatgtttaacatgggatctttaagtgatgag
gaactaaagtctctgcaggataagtacaagtctatttacttccactctatgagcaatgat
gctgctctactggctgttggtagtcttctgcaggttgtggatagtgtgtgcagcggtatg
acagccggtggcattggtgtggtgcgtccgcctgggcaccatgctgaaaggaaccatcct
tatggcttctgtttttataacaatgttgcagttgctgccaagtatgctctcaaacagtat
ggataccaacgtgtgttaatcttggactgggatgtccatcatggcaatggaatccagcat
tcttttgaatccaatccacaagtcctctacatatccatccaccgctacgaccatggtctc
ttctttccttcttctgaagatgccaactatgaccaagttggcactggagccggggaagga
tacaatgtcaacatcccatggaacaaggtacctagacaggaaaggctggtgagtggtatg
ggagatgctgaatacatctcagtgatgctgcaggtggtgttgcccattgcctaccagtat
gatccccagctggtcctggtctcagctggctttgatgctgctcgcggtgacccactggga
ggatgccacgtcaccccggaatgttacggacatatgacacatcttctatcaagtctagct
ggtggtaaaattgtgatggcacttgaagggggctataacctcaacaccatcagctactgc
atgactatgtgtgctaaggcactcttaggtgacccactgcccatgctagacgcatcactt
gtcccaaataaaggcgctgtgcagaccatcaatgacgttattaagactcactcaaaatat
tggtctgctctttccttccaggttgagctgccattagaggatgttctttgtcaaggattt
ggaggtggagcacaagcagttgaatctggggcatcaggttcagaggcctcatcatcttcc
actacctctcctgtctcaactccatccacaagtacccctccatttatcactgctccttct
tcaccagaaaagaccaaagagaagattctatgtgatggtgcagcttctattcttgtgggg
tttaatgaaactgaaaccaaatcacattcagaaaaaatggaagtgaattcaagccctcaa
gtttctgtaagatcacgaactgccgataaagagaatctttcagttgatagaaagaagaat
ggtataaagaatgcaaaaggttctgatataaatcttaatgctgttaaagcgccaccacag
acaaaaattaatcagagttctgcaagtagacaatctaagaagccaagtggtagatcaggt
aaacaagaagctgatagtgtaagacaaaaaatatcacgaactcctacacgttccagaaga
tctttgggtgaaggagcgttgcgtgctgctgcagacagcattgataagataaagcgttca
actgcaattatatccaatgaggagtactgtgagattagcagtggggaatatatgcaaggt
cccggaaatattaaagcaatcattgaacgatgtagtgagctgcaattgttagagacgtgc
actagacttcagccaagacctgccactgaggcagagatattggctgttcacaaagaggaa
acacttaagaacatcccaggaggtacaagaaagggcatctatcatcctgtaattggagat
gatatcttgactgctgctggaagtacagtggaattgattcaagaaattgtattaggcaaa
gctcaaaatggtttggctattatacagtcttcaggtcatttggtgtcagaaaataatgca
actcccaacacccatttgaataacactgctattggagttcgctttgcattagataacttg
ggacttagtcgggtgctaataattgattgggatggccagcatgagattaatacccagcat
ctcttctatggtgagccacgagtcttggtgttttctatgcacctacacagcaatcaacac
ccagaggaaaatgtagcgggtgaaacaggagaactagaagatgacagttataattttaat
gtcaagctaaactgtcccatctttcggagtgaagattattattcagtctttcatcagctg
cttctaccagtagcatatgaattttctccagaattagtcattatctcagctggatatgaa
ctatcgctacactctggacattttcatccggtaatttattcacatctaacaggtttgctg
atgccattagcacagggcaagattgcagtgataatagaggttggaagatgcaaaaatcct
ttggcagaaggagtggccgccacattacgtgtactcaaggatgagccctctgaacccatg
gcatttccaacaagtgattactcctcagaagcaaagcaagcaattattaatgtaataagt
gcacagagagctaaatggggcagcttaatgcgtcatgctcaaacttcagctgttgcatgt
aaaccaaaagtgaactcttctcccatcatcaagccacaggaagagcactacttccaactc
caaagactgggtgggaatatcccaaggccaaagcatacagtatgtcttgtttatgatgac
ttaatgatggaacacttcaactatgaagatgagacatatcctgagaggccagagagaata
agctcaatttataagtgcttgcaagagtttggcattgttggccgatgtcatcagatcaag
gcaaggatagcatcagaaagtgaactggaaactgtacatagttcgaaacacatcaacttc
atgtcatccctgaatgctaagaaacctcaagatcttcagtacttgcagaataaatatgat
tccatctatcttcatcgccgcaccaacaacactgctcttttggccgctggctctctagtt
gcggttgtggacagtgttgtatcaggcgaaagtcatcgtggtgttgcagtgatccgtccc
cctggccaccatgctgagaggaataagccttatggcttttgcttctacaacaatgtggct
cttgctgccaaacatgccatcaacactcatggattgcagaggatattaatcttggactgg
gatgtccatcatggcaatgggatccagcatatgtttgagtcagacccacaggtcctctat
atatcaatccatcgctatgataacggaaagttcttccccggcacttccgccggtaactac
gatagggtgggcaccaaggaagggaaaggatataacgtgaacattccatggaataaggga
gggatgggtgatggtgactacatggcagccatggtccaggttgtgcttcctattgcttac
cagttcaagccccagctggtgctggtctcagctggatttgattgtgctgttggagatcct
cttggtggatgcaatgtgacaccagagtgttttggacacatgacgaagatgttgacgtgc
ctggcagagggtcgagtcattatcgccctggaaggtggctacaacctgaacagcatcagt
tactgcatgaccatgtgtgtcaaggctctcctgggagaccctcttctccctctagctcaa
aatttaatgccttgtactagtgctatagaatcactggccagtgttgttgatgtacatagg
aagttttggtctgcactaaatttcaaggatgaagctttatcggctgtgggtctgactcct
acctgcccaaaactgaatgtcgcacattcaccctcaaagaagagttccgaaggaaccttt
acaggtttggaagacttgactaacagcttcagccgagtaaagctagaagatacgaacaca
ggcacagccacagcaacagcagccttagatgaaacaagtgtaacactagggagtaagaat
caggaagaagacattggtgctgtgggaggagcttatggaagttctgcagttagcaacatg
agtaccttcctgttgtctgactttgctgctggaaagcaaacgtatgcagtggtgccgatt
acatggtgccctcaccttgaagaggtacatcctgtacccagtagtgggttaaagacaggc
agtccctgcgaggagtgtcacgacccctccgagaactgggtttgtctcacttgctacaag
gtgttgtgtggaaggttcgtgagcgagcacatgatgctacacggactcatgcacgaacac
aagatggtgctgagcttcactgacctgtccgtttggtgctatgcctgtgatgtttatgtc
caccatccaatcctggaggaggcaaagcgttcagctcacctggacaagtttggggaggat
attcctggattttcatga
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integrated database retrieval system
