Procambarus clarkii (red swamp crayfish): 123768922
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Entry
123768922 CDS
T07930
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123768922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123768922
04121 Ubiquitin system [BR:
pcla04121
]
123768922
03036 Chromosome and associated proteins [BR:
pcla03036
]
123768922
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123768922
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
123768922
Ubiquitin system [BR:
pcla04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
123768922
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
123768922
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
123768922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
BRCT
Ank_5
Ank_3
zf-RING_6
BRCT_2
zf-RING_5
zf-C3HC4_3
RTT107_BRCT_5
Prok-RING_4
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
Sina_RING
Motif
Other DBs
NCBI-GeneID:
123768922
NCBI-ProteinID:
XP_045615700
LinkDB
All DBs
Position
LG56:5409909..5432136
Genome browser
AA seq
608 aa
AA seq
DB search
MDVFQLFDWEHSLQAIQQLEVLLKCSVCNEIATDPQCLGRCDHFFCAECTGSLENGTCPV
CKIPAPPCEMKPDRIISGLAASTKDLRKLLKGGHIDGTEAGLEAPSRALCTPERQIRPSN
LLQNISTKSSLNCSSKFQPVNKSDINTSHRDNSKIEVKKISPNQGKIKNNMSNSKAGKKV
KSASKQIGGKKSSGRKSPTNSSVTNFKPNKSCPSFPVTPDNKLLKLFDSSVLGKSPGTPI
INKRNSKGETPLHVACIKGDSEKVLQLLKEGANPNTKDNAGWTPLHEACSHGFQNIAELL
LKHGAIVDVPGGSNENPLHDAVTQGQVEVIKLLRTWGASDTARNLFGFTPRSLANLCVGV
VELNSALDTPEDTTLQRPQVMTRLLDKIVLLGSGLSAENLRKLDNLAKLLRARVTSEFSM
DVTHIIAHCTQERIVSQRTLKYMMGVVSGKWILSHTWMDDCLSQEQAVNPQPYEVIGSSH
NSTSSAPAKARSHVEKMHPGLFNGCHMFLWGNFCEPYPNKKGLEAIIKAGGGTVLVREPN
PESISEKEQTVPFYSDENSVLNSCSHYIIYQDGVVEPQLKYDMAHIKSLPLSWLFSCIDN
FELVPPFK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctttcaactatttgattgggaacactccctgcaagccattcaacagcttgaa
gttctgctaaaatgtagcgtttgtaatgaaatagccacagaccctcagtgtctgggcaga
tgtgatcactttttttgtgctgagtgtactgggagccttgagaatggtacttgtccagtg
tgtaagatcccagcacccccgtgtgagatgaagcccgaccgcatcatatctggtcttgcg
gcttccactaaggatctgaggaaactgctgaagggtggccacattgatggcacggaggct
gggctggaggctccttcccgtgcattgtgtaccccagagagacaaatcaggccttctaat
ctcctgcagaatatcagtaccaagtcatctttaaactgttcttcaaaatttcaacctgtc
aataagagtgacatcaacactagtcaccgtgataatagcaaaattgaggtcaagaaaatt
agcccgaatcaagggaagatcaagaataacatgagtaatagtaaagctggaaagaaagta
aagtcggcttcaaagcagattggtggaaagaagagtagtgggaggaagtcccctaccaat
tcctccgtgactaactttaaaccaaataaaagttgtccatctttccctgtaaccccggat
aataagttgctgaagttgtttgattcgagtgtcctgggaaagagtcctggcactccgatt
attaataaaagaaactcgaagggagaaacaccgcttcatgttgcatgtattaagggggac
agtgagaaagtgctgcagctgctcaaggagggagcaaaccccaacaccaaagataatgca
ggatggacccctttgcatgaagcctgcagtcatggctttcaaaatattgctgagctgctg
ctgaaacacggagccatagtggatgtgcctggcggcagtaatgaaaatcctctacatgat
gctgttactcagggtcaggtggaggttatcaagcttctcaggacttggggtgctagcgac
accgctcgcaatctctttggatttactcccaggtctcttgctaacctgtgtgtaggagtg
gtggagctcaatagtgctctagacactcctgaagacacgactttgcagcggccacaggtg
atgacacgccttcttgacaaaattgtgctcctgggatctggattgtcggccgagaatctg
agaaagttggataacctggccaagttgctgcgagctcgggtgacctctgagttcagcatg
gacgtgacccacatcattgcacattgtactcaagagagaattgtgagtcagcggacactc
aagtacatgatgggagtagtgtcgggcaaatggatcctctctcacacatggatggatgat
tgcctttcccaagagcaagcagtgaatccccagccctatgaagttattgggtcgagtcat
aacagtaccagcagtgcacctgctaaagccagaagccacgttgaaaaaatgcatcctggc
ctttttaatggatgccacatgttcctgtggggaaatttctgcgaaccatatccaaataag
aagggtcttgaagcaataattaaagcagggggtggcacagtgttagtgcgagagcccaac
ccagagagcatatctgaaaaggagcagacggtaccattttacagtgatgagaatagtgta
cttaacagttgctctcactacataatttaccaggatggtgtagtagagccacagctcaag
tacgacatggcacacatcaaatctttgcccctgagttggcttttttcgtgtattgataac
tttgagcttgtacctcctttcaaatag
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