Phasianus colchicus (Ring-necked pheasant): 116234506
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Entry
116234506 CDS
T07365
Symbol
POLB
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116234506 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoc03400
]
116234506 (POLB)
Enzymes [BR:
pcoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116234506 (POLB)
DNA repair and recombination proteins [BR:
pcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
116234506 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
116234506 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
HHH_5
HHH_2
HHH_3
NTP_transf_2
Cdd1
Motif
Other DBs
NCBI-GeneID:
116234506
NCBI-ProteinID:
XP_031458007
Ensembl:
ENSPCLG00000010058
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MSKRKAPQESLNQGITDFLMELANYERNVNRAIHKYNAYRKAASVISRYPSRIRNGAEAK
KLDGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTSASINFLTRVTGIGPAAARKFVEEGIK
TLEDLRKNEHKLTHHQRIGLKYFEDFEKRIPREEMLQMQEIVLKEVKNVDPNYIATVCGS
FRRGAESSGDMDVLLTHPTFTSESSKQSKLLHQVIEQLEKVHFVTDVLSKGDTKFMGVCQ
LPNKDDGTSYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEMGFTINEYTIRP
LGVTGVAGEALPVECEKDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacggaaggcgccgcaggagagcctcaaccagggcattacagatttcctcatg
gagctagcgaattacgagcgcaacgtgaaccgagccatccacaagtacaacgcctacagg
aaagcggcctctgtcatctcccggtaccccagcagaatacggaatggagccgaagctaag
aagctggatggagtaggtgctaaaatagctgagaaaatagatgagtttttgtctactgga
aagcttcgcaagttggaaaagattcgacaagatgatacaagtgcttccatcaacttcctg
acacgagttactggcattggacctgctgctgctaggaagtttgttgaggaaggaattaag
actttagaagatctaagaaaaaatgagcacaagctgacccatcaccagcgaattgggttg
aagtattttgaagattttgagaaaagaatcccaagggaagaaatgttgcaaatgcaggaa
attgtgctgaaagaggtaaagaatgtggacccaaattatattgctacagtctgtggcagt
tttaggcgaggtgcagagtcgagtggtgacatggatgttctcttaacccatccaactttc
acatctgaatcatccaaacagtcaaagcttctgcatcaagttatagaacaactggaaaaa
gtccactttgtcactgatgtgctgtctaaaggtgacaccaaattcatgggtgtctgccag
ctgccaaataaagatgatggaacatcttacccacataggagaattgatattcggcttatc
cctaaggatcagtattactgtggtgtactgtatttcacaggcagtgatatattcaataag
aacatgagagcccatgctctggaaatgggcttcacaatcaacgagtacacaatccgtccc
ttgggtgtcactggagtcgccggggaagccctaccagtagaatgtgagaaagacatcttt
gactacatccagtggaaataccgagagccaaaggatcggagtgaataa
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