Puma concolor (puma): 112866876
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Entry
112866876 CDS
T08890
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112866876 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoo03019
]
112866876 (BARD1)
04121 Ubiquitin system [BR:
pcoo04121
]
112866876 (BARD1)
03036 Chromosome and associated proteins [BR:
pcoo03036
]
112866876 (BARD1)
03400 DNA repair and recombination proteins [BR:
pcoo03400
]
112866876 (BARD1)
Messenger RNA biogenesis [BR:
pcoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
112866876 (BARD1)
Ubiquitin system [BR:
pcoo04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
112866876 (BARD1)
Chromosome and associated proteins [BR:
pcoo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
112866876 (BARD1)
DNA repair and recombination proteins [BR:
pcoo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
112866876 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT_2
zf-RING_5
SICA_C
zf-C3HC4
DUF5057
Cofilin_ADF
BRCT
Motif
Other DBs
NCBI-GeneID:
112866876
NCBI-ProteinID:
XP_025785626
UniProt:
A0A6P6IBL3
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MPGNRQPRVRSGNELRPAPAMEPEGRGAWAHSRAAFDRLEKLLRCSRCTNILREPVCLGG
CEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDNKLSDLKE
DTSRQNVFNDAENKKNSIKMWFSPRSKKVRYVVTKVSVQTQPQVIDDGNAQQASVYKFVS
TSPPTSVPERAKKASTRSSKKQKKKTLAEINQEWNFEAEKEDGEPDSKEEFKEKLVSFCS
QPSVIASPQTNGDIDLLASDSVTESECSRSLTEVSLPLAEQIESPETESRNEDATPEKNA
CVNHLTSKQPLPSGHNGRPGRRSRRSSPISKRCRSSIPGTSGQQMLLSENKPLPGCSSPP
PSKRKVGDTLRRKNSNISDESMSLSPGTPPSTLNSPSYRRMMFSPSAMKLSPGSLTAVKR
NHRGETLLHIASIKGDLPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK
ALVNSAGYQNDSPLHDAAKNGHMDIVKLLLSYGASRNAVNIFGLRPVDYAEGENMKSLLL
LPEENESSSTRHCSVLEKNYIKCVKNKDTFMVVLECEHGDVLREEEVVYPPSVLPSYCCV
FIKCKKPVPSACLMDMASQYHYYYLHVLSESKVRKSKQVRAGEVEGSSAGGGAGPTRSRT
ILKTVMEKKSHLGVKACLQRKACEQEEKYEIPEGPQRSRLNKEQLLPKLFDGCYFYFGGA
FKHHPKDNLVKLVTAAGGHVLSRKPKPDSDVTQTINTVAYHAKADSDQRFCTQYIIYEDL
SNHRPERVRQGKVWMAPSSWFIDCVMSFELLPLDS
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaccggcagccgagggtccggtccgggaacgagcttcgtcccgcgcccgcc
atggagccggaggggcgcggggcctgggcccacagccgcgccgcgttcgaccggttggag
aagctgctgcgctgctcgcgttgcactaatattctgagggagcctgtgtgtttaggggga
tgtgagcacatcttctgtagtaattgtgtaagtgactgcattggaaccggatgtccagtg
tgttacaccccagcctggatacaagatgtgaagataaatagacagttggacagcatgatc
cagctttgtagtaagctccggaatttgctgcatgacaataagctatcagatttgaaagaa
gacacatctaggcaaaatgtattcaatgatgcagaaaataagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtcagatatgttgtgactaaagtttcagtgcaaacc
cagcctcaagtgatagatgatgggaacgctcagcaggcctcagtgtacaaatttgtctct
acaagtcctccaacaagtgttcctgagagggctaaaaaggcttccacgaggtccagcaaa
aaacagaaaaagaaaactttagctgaaatcaaccaagaatggaatttcgaggcagaaaaa
gaagatggtgaacctgactccaaagaggaatttaaggaaaagctggtgtctttctgtagc
cagccatctgttatcgctagtcctcagacaaatggtgacatagacttactagcaagtgac
tctgtaaccgaatcggagtgttctagaagcttaactgaagtctccttaccattggctgag
caaatagagtctccagaaacagagagcaggaatgaagacgcgactcccgagaagaatgct
tgtgtgaatcatcttacatctaagcagcccttgccatcaggtcataatgggcgacctgga
cgtcgcagcagacggtccagtcccatttctaagagatgcagaagcagcattcctggcacg
agtgggcagcaaatgctgctttcagaaaacaaaccactgcctggctgctcttcaccacct
ccaagcaaacgtaaagttggtgacacattaaggaggaaaaacagtaatatatcagacgaa
tccatgagcctttcaccaggtacaccaccttctacactgaatagtccaagttacagacgg
atgatgttcagcccttcagcaatgaagctgtctcccggtagccttacagctgtgaaaaga
aatcatagaggagagactttgcttcatattgcttcaattaagggcgacctaccttctgtg
gaatacctcttacaaaatggaagtgacccaaatgttaaagaccatgctggatggacacca
ttgcacgaagcctgcaaccatgggcacctgaaggtggtggaattgttgctacagcacaag
gcgttggtgaactccgctgggtatcagaatgattcaccacttcatgacgctgccaagaat
gggcacatggatatagtcaagctcttactttcttatggagcctccaggaatgccgtgaac
atatttggtttgcggcctgtggattatgcagagggtgaaaatatgaagtcactattgctg
ctaccagaggagaatgaatcatcatcaactcgccattgctcagtactggagaagaattac
atcaaatgtgtcaaaaacaaagatacctttatggtggtcttggagtgtgaacatggcgat
gtcctcagagaagaggaagttgtttaccccccctcagttctacccagttactgctgtgtt
tttataaagtgtaagaagcctgtaccttctgcatgtctgatggacatggcctcacagtat
cattattactatcttcatgtcctaagtgaatccaaggtcaggaaaagcaaacaagtgaga
gcaggggaggtagaaggcagctctgcaggtggtggtgctggaccaaccagaagcagaaca
atacttaaaacagtgatggagaagaaaagtcatctaggggtgaaagcatgtctacaaaga
aaagcatgtgaacaggaggaaaagtatgagattcctgaaggaccacagcgaagcaggctc
aacaaagaacagctgttgccaaagctgtttgatggctgctacttctattttgggggagcc
ttcaaacaccatccaaaggacaaccttgttaagcttgtcactgcagctggaggccatgtt
ctcagtagaaagcccaagccggacagcgacgtgactcagaccatcaatactgtcgcgtac
catgcgaaagctgactctgatcagcgcttctgcacgcagtatatcatctatgaggatctg
tctaaccatcgcccagagagggtgcggcagggcaaagtctggatggctccttccagctgg
tttatagattgtgtgatgtcctttgagttgctccctcttgacagctaa
DBGET
integrated database retrieval system
