Pseudocercospora fijiensis: MYCFIDRAFT_107291
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Entry
MYCFIDRAFT_107291 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pfj01009
]
MYCFIDRAFT_107291
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_107291
04131 Membrane trafficking [BR:
pfj04131
]
MYCFIDRAFT_107291
03036 Chromosome and associated proteins [BR:
pfj03036
]
MYCFIDRAFT_107291
Enzymes [BR:
pfj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
MYCFIDRAFT_107291
Protein phosphatases and associated proteins [BR:
pfj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
MYCFIDRAFT_107291
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
MYCFIDRAFT_107291
Membrane trafficking [BR:
pfj04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MYCFIDRAFT_107291
Chromosome and associated proteins [BR:
pfj03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
MYCFIDRAFT_107291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
DUF3431
Motif
Other DBs
NCBI-GeneID:
19330106
NCBI-ProteinID:
XP_007923154
JGI:
107291
UniProt:
M3B8E1
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
DGPKPAKFSNLPYATSQTGLVYDVRMRFHVEAEPSEDDLHPEDPRRIHAIFEAFVNAGLA
WREGDSGPTSDYYMGRVDARMVTREEVCLVHTANHWNWVQSLGVMSAEQLKTEEQHEGSR
NDSIYLSNSTPYCASLSAGGAIEACRAVMLGKVKNIFAVIRPPGHHAEREDAKGFCFYDN
VSIATKVCQKEFGERCRKVFILDWDVHHGNGIQQANYDDPNVLYISLHVHKRGTFYPEHS
YRDNRIAYGDHLHCGEGPGLGKNVNIPWSRQGMGDADYIYAFQQVVMPIATEFNPDLVII
AAGFDAAEGDMLGGCKVTPAGYAHMTHMLMSLADGKLAVCLEGGYNLESIARSATAVGRT
MMGEPPDRLDNLSPTNSGVDDVKLVLRQQSRFWSCLYPKDLSARLSQLRGEHMPNVVRGW
QAKTLFEEYRMTSLFVHREQLAKAFEDQVLATPNYAESRPLLVILHDPPEILASPDPRTG
KMELHNTWLTDVVKTYIDDAVKRGFAVIDVNLPKHVSEDDSDPHQHQESDSIESRTKEAT
QLLTYIWENYIELNDSTHIFLMGTNTGHGAILSFIKSHDDRAQRMITKAISFVEDVPLTS
CKSLVGNDMLPSWYWNHSLVFVAGGHNYWESEYARKPKKRFGNVSRSVSTSISDMLAEHR
DEVL
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
gatggaccaaagcctgccaagttcagcaacctgccttacgcaacatcacaaactgggctt
gtttacgatgtgcgcatgcgctttcacgtggaagcagaaccttctgaagacgatctacac
cccgaggatccaaggcgaatacatgccatcttcgaggcttttgtcaacgccggtcttgct
tggagagagggcgattcggggcccactagtgactactacatgggccgtgttgatgcaagg
atggtgaccagagaagaagtgtgcctagtgcatacagctaatcactggaactgggtccaa
tccctcggcgtcatgagtgcggagcagctgaagactgaagagcaacacgaaggttccagg
aatgactcgatctacctatcgaacagtactccatactgcgcaagcctttcggcaggcggt
gcgattgaagcttgtcgagctgtgatgcttggcaaggtcaagaacatcttcgccgtgatc
agacctccgggccatcatgccgaacgcgaggatgccaaaggcttctgcttttatgacaac
gttagcatcgctaccaaggtctgccagaaagagttcggcgagcgatgtcgaaaggtgttc
attcttgattgggatgtccatcatggtaacggcatacaacaggccaactatgacgatccg
aacgtgttgtacatctcattgcatgtgcacaagcgaggcacgttctatccagaacactcc
tatcgcgataatcgaatcgcttatggtgatcatctacattgcggtgaaggtccgggacta
ggcaagaatgtcaacatcccatggagccgccagggaatgggagacgcggactacatttac
gctttccaacaagtggtcatgccgatcgctacagaattcaatcccgaccttgtcatcatt
gcggctgggttcgatgccgcagaaggcgacatgcttggtggctgcaaggtcacgccggcc
ggctacgcacacatgacacacatgctcatgtcgttggcagatggcaagcttgcagtctgc
ttggaaggcggatataatctggagtcgatagcccggtctgcgaccgctgttggccgcacc
atgatgggcgagccaccagacaggttggacaatttgtcgccgacgaactctggagtcgat
gatgtgaagctcgtacttcgccagcagagcaggttctggtcttgtctttaccccaaggat
ctttcagccaggcttagtcaattgcgcggcgagcatatgcccaatgttgtccgtggatgg
caggctaagacgctcttcgaggagtatcgcatgacatcgctcttcgtacatcgtgagcaa
ctggcaaaggcattcgaagatcaagtgcttgcaacacctaactacgccgagtctcgaccg
ttgctggtcatattgcacgacccgccggaaatcctagcatcaccagatcccaggactggt
aagatggagctgcataacacttggctgactgatgtggtaaagacgtacattgacgatgca
gtaaagcgaggttttgctgtcattgatgtcaatctgccaaagcacgtgtcagaggacgac
tctgatcctcatcaacaccaagagagtgacagcatcgagtcccggacgaaagaagccacg
cagctactgacatacatctgggaaaactacatcgagttgaacgacagcactcacatattt
ctgatgggcaccaacacgggccacggcgccattttaagcttcatcaaaagccacgatgat
cgtgcccagcgaatgattaccaaggccatatcatttgttgaagatgtacctctcacatca
tgcaagtcactcgtgggcaatgacatgcttccttcttggtattggaaccactcgctggtc
tttgtggctggcggccataactactgggaaagcgaatacgcacgaaagcccaagaagaga
tttggcaacgtgtctcggagtgtttccacgtctatcagcgacatgctcgcagaacatcga
gatgaagtgctt
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integrated database retrieval system
