Pseudochaenichthys georgianus (South Georgia icefish): 117439554
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Entry
117439554 CDS
T09629
Symbol
extl3
Name
(RefSeq) exostosin-like 3
KO
K02370
alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:
2.4.1.223
2.4.1.224
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
pgeo01100
Metabolic pathways
Module
pgeo_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
117439554 (extl3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pgeo01003
]
117439554 (extl3)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
117439554 (extl3)
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
117439554 (extl3)
Glycosyltransferases [BR:
pgeo01003
]
Glycan extension
O-Glycan
117439554 (extl3)
BRITE hierarchy
Motif
Pfam:
Glyco_transf_64
Exostosin
ADIP
MscS_porin
TPR_MLP1_2
TBK1_CCD1
EXOC6_Sec15_N
DUF5082
Seryl_tRNA_N
DUF1664
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
117439554
NCBI-ProteinID:
XP_033931376
EnsemblRapid:
ENSPGEG00000013406
LinkDB
All DBs
Position
24:28196410..28227751
Genome browser
AA seq
915 aa
AA seq
DB search
MQRNGGGAGAGGQPWVLRRVRLTWLSFMLFFILVFFPLIAHYYLTTIDEAGGPEKHIFGP
RPGGELCEVKHVQDLCRIRESVSEELLQLEAKRQELNGEISRLNMRIEACKRSIDSAKQD
LLQLKNVISQTEHSYKELMAQNQPKLSLPVRLLPDKEDPGLPPPKSARSCRLRSCFDYAR
CPLTSGFPVYVYDTASYPWADFIDPLVKQAFAASVKSNIYITDNPSIACLYLVLVGELQE
SSSPPPPPSELEKQLKALPYWRSDGHNHVLVHFSRMSMTQNFLYNVSTGRAAVAQSTFLE
QQYREGFDLVVSPLVHALSEPNFLEVPPQVPVKRKYLFTFQGERVESLRSSLQEGPPQTF
EEEMEGDPPADYDDRIIGTLKAVQDSHLDQVLVEFTCKNPRPSLPTEWALCGEREDRLEV
LKVSTFGLVIAPGDGQLVASAGCGMRLFEALEVGTIPVVLGDHSRLPYHQLIRWSEAAII
VPKPRVTELHFLLRSLSDNDMLAMRRQGRFLWETYFSTSENVLNTLLACIRTSIQVPAAP
IKEEPAHEIPHKAGKLAGTDANLADNGDLDLGPVETEPPYASPRFLRNFTYTASETYRAW
NRAPGPFHLFPHTPLDPVLPSEAKFLGSGTGFRPIGGGTGGSGKEFQAALGGNVPREQFT
VVMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPKPPSDDLLWPDIGLPIVVVRTEKNS
LNNRFLPWDVVETEAILSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRYHAWDVNHQS
WLYNSNYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDMVDEYINCEDIAMNFLVSHIT
RKPPIKVTSRWTFRCPGCPQALSHDDSHFHERHKCINFFVKVYGYMPLLYTQFRVDSVLF
KTRLPHDKTKCFKFI
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtaacggcgggggggcgggcgccggtggccagccatgggtgttacggcgcgtg
cgtctcacctggctcagtttcatgctctttttcatcctggtcttcttcccactcatcgcc
cattactacctcacgaccatcgatgaagccgggggtcccgagaagcacatctttggcccg
cggcccggtggcgaactctgtgaggtcaaacatgtgcaggatctgtgccggatccgcgag
tcggtcagcgaggagctgctgcagctggaggccaagaggcaggagctcaacggggagatc
tcccgactcaacatgcgcatcgaggcctgcaagcgcagcatcgacagcgccaagcaggac
ctgctgcagctgaagaacgttatcagccagacggaacactcctataaagaactgatggcc
cagaaccagcccaagctttcactgccggtcagactgctgccagacaaggaggacccgggt
ttaccaccgccgaagtctgcacgctcctgccgcctacgctcctgcttcgactacgcccgc
tgccctctcacctctgggtttccagtctatgtctatgacacggcctcctatccatgggca
gactttattgaccccctggtgaagcaggcgtttgcagcatcagtgaagagcaacatttat
ataaccgataaccccagcattgcctgtctctacttggttttagtcggggagctgcaggag
tcctcctccccgcctcctcctccctcagagctggagaagcaactgaaagctctgccttac
tggagatctgatggacacaatcatgttctggtgcatttctctagaatgtcaatgacacag
aacttcctgtataatgtgagcacaggacgggcggcagtcgctcagtccaccttcctggag
cagcagtaccgcgagggctttgacttggttgtgtccccgctcgttcatgccctctcagag
ccaaactttttagaagtgccccctcaagttcctgtaaaaaggaaatacctcttcaccttc
cagggggagagggtggagtcactaaggagcagcttacaggaaggacccccccagactttc
gaggaggagatggaaggagacccaccagccgactacgatgatcgcatcatcggcacctta
aaggcggtgcaggacagccaccttgatcaggtgctggtggagttcacctgcaagaacccc
cggccgagtctgccgactgagtgggctctgtgtggggagagggaggaccggctggaggtg
cttaaggtttccacctttggcctggtgatagctccaggggacgggcagctggtggcctca
gcaggctgtgggatgaggctctttgaggccctcgaagtggggaccatcccagtcgtgttg
ggggaccactccagactgccgtatcaccagcttattcgatggagcgaagctgccatcata
gtccctaagcctcgtgttacagagctacacttcctgctgcgcagcctatcagacaatgac
atgctggccatgaggcggcagggccgcttcctgtgggaaacgtacttctctacctcggag
aatgttctaaacaccctcctggcctgcatcagaaccagcatccaggttcctgctgctccc
atcaaagaagagccggctcacgagattccccacaaagcagggaagctggcaggaactgat
gccaacctggctgacaatggggacctggatctgggtcctgttgagacggagcccccctac
gcctctccgcgctttctccgcaacttcacatacacagcttcagaaacatatcgagcatgg
aaccgggccccggggcctttccatctgttccctcacactcctctggaccccgtgctgccc
tctgaagccaaattcctcggctctggaactggcttcaggcccatcggtggaggtacggga
ggctcagggaaggagtttcaggcagctctaggagggaatgtgccccgagaacagttcacc
gtggtcatgctgacctatgagagggaggaggtgctgatgaactctctggagaggctgaat
ggactgccgtacctcaacaaagtagtggtggtgtggaactcacccaagcctccctcagac
gacctgctgtggccagacatcggcctgcccatcgtggttgtccgcacagagaagaacagc
ctcaacaaccgcttccttccctgggacgtcgtggaaaccgaggccatcctgtcgattgac
gatgacgctcatctccgccacgacgagatcatgttcgggttcagagtgtggcgcgaggcc
agagatcgcatcgtgggtttccccggaaggtaccatgcgtgggacgtgaaccatcagtcc
tggctctacaactccaactactcctgtgagctctccatggtcctgaccggagctgctttc
ttccataagtactacgcctacctgtactcctacgtgatgccccaggctatcagggacatg
gtggacgagtacataaactgtgaagacatcgccatgaacttcctggtttctcacattacc
cgaaaacctcccatcaaggtgacgtcacgttggactttccgctgtcccggctgccctcag
gccctttcacacgacgactcccatttccacgaacgccacaagtgcatcaatttcttcgtc
aaagtgtatggctacatgccgctgctgtacacacagtttcgcgtggactctgtgctgttt
aagactcgtttgccccacgacaagaccaagtgctttaagttcatatag
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