Pedobacter ginsengisoli: CPT03_18565
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Entry
CPT03_18565 CDS
T05145
Name
(GenBank) D-alanyl-D-alanine dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs01502
Vancomycin resistance
pgs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CPT03_18565
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CPT03_18565
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgs01002
]
CPT03_18565
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgs01011
]
CPT03_18565
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pgs01504
]
CPT03_18565
Enzymes [BR:
pgs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
CPT03_18565
Peptidases and inhibitors [BR:
pgs01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
CPT03_18565
Peptidoglycan biosynthesis and degradation proteins [BR:
pgs01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
CPT03_18565
Antimicrobial resistance genes [BR:
pgs01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
CPT03_18565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
VanY
Peptidase_M15_4
Motif
Other DBs
NCBI-ProteinID:
ATP58324
UniProt:
A0A2D1U9Y2
LinkDB
All DBs
Position
4457769..4458452
Genome browser
AA seq
227 aa
AA seq
DB search
MKQYLYLLFLLCPFFISAQQYKGNPYGLQVIGSDKDYKASYAKNPQNELIEIKREIPNIK
LDIKYATKNNFMNQVMYKEARAFARKPVVTQLKKIQLVLNKKGYGLKIFDAYRPYAITLA
FYQKALNKNFVANPKKGSKHNRGCAVDLTLIDLKTGKELQMPTPYDSFAEQASPSYSNLP
PQVIKNRTLLITTMQAYGFRVIKNEWWHFDFIGWKNYALMDIPFESL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtacctgtatttattgttcttgctctgccctttctttatctcggcccagcaa
tacaaaggcaatccttatggcttacaggtcattggctcagataaagactacaaggcatcc
tatgctaaaaacccgcaaaacgaactcatagaaatcaaaagggaaattccaaatattaag
ctcgacattaagtacgccaccaaaaataatttcatgaatcaggttatgtacaaagaggcc
cgcgcttttgccagaaagcctgttgttacacagctaaaaaagatacaattagtccttaac
aaaaaaggctatggcctaaaaatcttcgatgcgtaccggccatatgccatcacactggca
ttctatcaaaaagccctgaataaaaactttgttgccaaccccaaaaaaggctctaaacat
aatcgtggatgtgctgttgacctcaccctgattgatttaaaaaccggaaaagagctgcaa
atgccaaccccatacgacagctttgccgagcaggcctcgccatcctattcaaacctaccg
ccccaggtaataaaaaacagaacattattaattacaacaatgcaagcttatggtttccgt
gtaataaaaaatgaatggtggcatttcgatttcatcggatggaagaactatgcgcttatg
gacatcccgtttgaaagcctataa
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