Pectinophora gossypiella (pink bollworm): 126378046
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Entry
126378046 CDS
T09293
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pgw01009
]
126378046
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126378046
04131 Membrane trafficking [BR:
pgw04131
]
126378046
03036 Chromosome and associated proteins [BR:
pgw03036
]
126378046
Enzymes [BR:
pgw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
126378046
Protein phosphatases and associated proteins [BR:
pgw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126378046
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
126378046
Membrane trafficking [BR:
pgw04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
126378046
Chromosome and associated proteins [BR:
pgw03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
126378046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
126378046
NCBI-ProteinID:
XP_049882101
EnsemblRapid:
LOC126378046
LinkDB
All DBs
Position
2:15201524..15224991
Genome browser
AA seq
1144 aa
AA seq
DB search
MSTPSPPQPRRSAGDGKKTTPPTSNIVTRNGARKAKIQTRAMSAGAKPSASLVAAKKKAL
LKKKQNIDTVIRDHYQIAMECKNKVKGPTGFVTEPRMAEHRCLWDDNYPECPERLTSVIE
RCKELGLIEQCRQFPPRAATKQELCTLHCPSVNDMLLTTHRSEDLQYLEDLSARYDAVFI
HPSTHELALLAAGSTIDMVDRIISESIQNGAAFVRPPGHHAMRAEPCGYCFYNNVALAAK
HALDKGVQRILIVDWDVHHGQATQQMFYDDPRVVYFSIHRYEHGSFWPNLRQSDFHYVGC
GRGKGYTFNVPLNKTGMTDADYLAIWHQLLLPMAFEYQPELVIVSAGYDAAIGCPEGEME
ITPACYPHLLNMLMSCCPRVCVVLEGGYCLASLAEGAALTLRTLLGHPPPRIEALQEPCD
EIRETILNSIYVHKPYWRCYNYQQTYSTDSSIPNVCDREKQKHTVCVKWEGDETRPERFA
TRDCYPLQDDATKRKIRERLDHLRIVTDLSLPKYPVGYIYDQAMLKHKNICEPGHVECPE
RIMRIHERHRDYGLLDRVHHLQARRATDDEILAVHTDKHLNRLKELATTKLRDLNSQKDQ
YDSVYFHPDSLESAAVAAGCAIQMVDAIFSNMAGAGVCVVRPPGHHADEDAPSGFCLLNN
ASVAATHALRAHAARRVLLLDWDVHHGNGTQHLTLHDDHILYISIHRYDHGSFFPHSKDA
DYTVVGEGKGEGYNVNIPWNKRGMSDAEYLAAFTQVVLPIAYEYDPDLVIVSAGFDACVG
DPLGGCNVSPECYGRMTQLLRGLAGGRVMLCLEGGYNVTSISYAMTMCTKALLGDPIPHH
YDPKVTVHWSAVETINNVIKTHKKYWKSLKFQLALPLENVLEDPLPSRGLIVTEDSTEVS
LSSTLDDSNKSINRTSKSLSDLNGSLETQLEQLTLKPKCEDGIHCGTDDEEEPKSSNVES
KGETKRDLEVEKDAGCKRTRVEKEIESSSKDQGGSAQGGSKLQETGTLVDYLAENMQAIV
DGEMFAVIPLPWCPHLDSLFAIPNDVKFEQGTKCVECEETVENWVCLHCYVVACGRSINA
HMQAHYSATQHALVLSLLDLSVWCNACDAYVDNALLYDAKNNAHRCKFHEDMPWCYRSDT
LQLH
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccccatcgccgccgcagccgcgccggtccgccggcgacggcaagaagaccacc
ccacctacctccaacatcgtaaccaggaatggagcacgaaaggccaagatacagacacga
gcgatgtcagctggcgcgaagccgtcggcgtcgctcgtggctgctaagaagaaagccttg
ttgaaaaagaaacaaaacattgacactgtgataagggatcattatcagattgccatggag
tgtaagaacaaagtgaagggcccgacggggttcgtgacggaacctcgcatggctgagcac
cgctgcctctgggacgacaattaccctgagtgcccggagaggctcactagtgtcattgaa
agatgcaaagaactgggcttgatagaacaatgccgccagttccctccccgagccgctacc
aagcaagagctgtgcacgttgcactgccccagtgtcaacgatatgctgttgaccacccac
cggagtgaggacctgcagtacctggaggacttgtctgctagatacgacgctgttttcata
caccctagtacgcacgagctggcactcctcgcggcgggctccacaatagacatggtggac
cgcatcatatcggagtcaatacagaacggcgcggcgttcgtgcggccgccgggacaccac
gccatgcgcgcggagccctgcgggtactgcttctacaacaacgtggcgctcgccgctaag
catgccctggacaagggggtgcagaggattttaatagttgactgggatgtacatcacggc
caagcgacacaacagatgttttacgacgacccgagggtggtatacttctcgatccatcgc
tacgagcacgggtcgttctggccaaaccttcgccagtccgacttccactacgtcggctgc
ggtcgaggcaagggatacaccttcaatgtgcctctcaacaagactggtatgaccgacgct
gactacctggccatttggcatcagttgctgttacctatggcttttgagtaccaaccggag
ctggtcatagtatctgccgggtacgacgccgcaataggatgtcctgagggtgaaatggag
ataactccagcctgctacccgcacctgctgaacatgttgatgtcgtgttgtccccgcgtg
tgcgtggtgctggagggcgggtactgcctcgcctcgctggccgagggcgccgcgctgacc
ctgcgcaccctgcttggacatccgccgccaaggattgaagcgttgcaagaaccttgcgac
gaaataagagaaacgatcctcaactcaatctacgtacacaaaccttactggcgttgttac
aactaccaacagacttacagcacagacagtagtataccaaacgtgtgcgacagagagaaa
caaaagcatacagtctgcgttaagtgggagggagacgaaacgaggccagaacgcttcgcc
acgagggactgctatcccttgcaagatgacgcgacgaagaggaagattagggagaggctc
gatcatttgaggattgtaacggacttatccctacctaaatatccagttggttatatctac
gatcaagcgatgctgaagcacaaaaatatatgtgaacccggtcacgtagaatgtccagag
cgtataatgcggattcacgagcgacaccgcgactatggactgctggatagagtgcaccac
ttgcaggccaggcgagccaccgacgacgagatactggccgttcatactgacaagcatttg
aacagactaaaagagttggcgacaactaaactacgtgacctaaacagtcagaaagatcag
tacgactccgtgtacttccaccctgactcgctggagagtgccgcggtcgccgctggatgc
gctatacagatggtagacgcgatattttccaacatggccggcgcgggagtgtgcgtggtc
cgtcctccggggcaccacgccgacgaggacgcgcccagcggcttctgcctgctcaacaac
gccagcgtcgcggccacgcatgcgctgcgagcgcacgccgcgcgccgcgtgctgctgctc
gactgggacgtgcaccacgggaacggcacgcagcacctcacactacacgatgaccacatt
ttgtacatatcgatccaccgctacgaccacggctcgttcttcccgcactccaaggacgcc
gactataccgtcgtgggggaaggcaagggggaggggtacaacgtcaacataccatggaat
aagcgcggtatgagcgacgcggagtatctagcggcgttcacacaggtggtccttccgata
gcttacgagtacgatccggacctggtaatcgtgtctgcagggttcgacgcctgcgtcggg
gatcccttgggaggttgcaatgtatccccggaatgctacggtcgtatgacgcaactactc
cgaggcctggccggcggccgcgtcatgctctgcctagaaggagggtacaacgtcacctcc
atctcctacgctatgaccatgtgcactaaagccttgctaggcgaccccataccccaccat
tatgaccctaaagtaacagtccactggtctgcagtagaaaccatcaataacgtcatcaaa
acccataaaaaatactggaaaagtttaaaattccaactcgctttgcctctagaaaacgtt
ctagaagatcccttgccttctagaggattgattgtaacagaagatagcacagaagtttcc
ctctcatctacattagatgattcaaacaaatccataaatagaacgtcgaaaagcctaagc
gacttgaatggttctcttgagactcagttagaacagctgactttaaaaccgaaatgtgaa
gacgggatccactgcgggactgacgacgaagaagaaccaaagagttccaatgtcgaatct
aaaggggaaacgaaaagagatttggaagtcgaaaaagatgctggctgcaaaagaacgagg
gtggaaaaagaaattgaaagtagtagtaaggaccaaggaggttcagcgcaaggaggttcg
aagcttcaagagacgggtactttagtcgattatttagcagagaacatgcaagcgatagtg
gacggagagatgtttgcagtgattccgttgccgtggtgcccgcatttagactcgctgttc
gccatccccaacgatgttaagtttgagcaagggaccaagtgtgtggagtgtgaggaaact
gtagagaattgggtgtgtctgcactgttatgttgttgcttgcgggcgcagcatcaacgcg
cacatgcaagcgcactacagcgccacccaacacgcgctagtgctgtccctgctcgacctg
tcggtgtggtgcaacgcgtgcgacgcgtacgtcgacaacgcgttgttgtacgacgcgaag
aacaacgcgcaccgctgcaagttccacgaggacatgccctggtgttaccgcagtgatacg
ctgcagctgcattga
DBGET
integrated database retrieval system
