Pirellula sp. SH-Sr6A: VN12_07765
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Entry
VN12_07765 CDS
T04360
Symbol
chmD
Name
(GenBank) dTDP-4-oxo-6-deoxy-D-allose reductase
KO
K10046
GDP-D-mannose 3', 5'-epimerase [EC:
5.1.3.18
5.1.3.-]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir00053
Ascorbate and aldarate metabolism
pir00520
Amino sugar and nucleotide sugar metabolism
pir01100
Metabolic pathways
pir01110
Biosynthesis of secondary metabolites
pir01240
Biosynthesis of cofactors
pir01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
VN12_07765 (chmD)
00520 Amino sugar and nucleotide sugar metabolism
VN12_07765 (chmD)
Enzymes [BR:
pir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.18 GDP-mannose 3,5-epimerase
VN12_07765 (chmD)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
NAD_binding_10
Polysacc_synt_2
NmrA
Motif
Other DBs
NCBI-ProteinID:
AMV32003
UniProt:
A0A142XYB7
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Position
1855087..1856133
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AA seq
348 aa
AA seq
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MNNKVVLVAGGGGFIGGHLVASLLNIPGIQVRSVDLKPLDEWYQVFPNAENLSADLQNKS
DCERVCEGVSDVYNLAADMGGMGFIENNKALCMLSVLINTHLLQASEAAKVERFFFASSA
CVYNADKQLRFDLEPLKESDAYPAMPEDGYGWEKLFSERMCRHFEEDFGLKTRVARFHNV
YGPHGTWRGGREKAPAAICRKVIEAIASGEHEISIWGDGRQTRSFTFIDDCIHGIDLIMQ
SSINQPINLGSSEMVSINQLVDIVERFFGVELQRHYQLDAPKGVNGRNSDNTLIKSLFDW
EPSTSLVNGMRQTCSWIRDEYIADLRKTGSHSAEIDRLLQADLVGSNT
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaacaataaagtcgtacttgtcgccggtggtggtggtttcattggcggtcatctggtc
gccagcttgttaaatatccctggcatccaagtccgctctgtggacttgaaaccgctcgac
gagtggtatcaagtcttcccgaacgctgaaaacctctccgcggacttgcaaaacaaatcc
gactgcgagcgtgtttgcgagggtgtgtccgatgtgtacaacctcgcggcagacatggga
ggaatgggattcatcgaaaacaacaaagccttgtgcatgttgtcggttttgatcaatacc
catttgctccaagcttccgaggcggcgaaggtagaacgatttttctttgccagctctgcc
tgtgtttataacgctgacaaacagttgcgatttgatctggagcctctgaaagaatccgac
gcgtaccccgcgatgccagaggatggctatggctgggaaaaactgttctcggagagaatg
tgccgtcacttcgaagaagatttcggattgaagacgcgagtggctcgcttccacaacgtt
tatggtccgcacggaacctggagaggcggacgagagaaagcacctgcggcgatttgtcga
aaggtgatcgaggccatcgctagcggcgagcatgaaatttcgatttggggggatggcaga
cagacccgaagttttacctttatcgatgactgcattcacggcattgatttgatcatgcag
agcagtatcaaccagccgatcaatttgggttccagtgaaatggtgtctatcaaccagctc
gtggatatcgtggagcgattcttcggagttgaactccaacgtcattaccaattggatgca
cccaagggagtcaatgggcgcaatagcgataatactcttattaagtccctattcgattgg
gagccaagcaccagccttgtaaatggtatgagacaaacctgctcttggatccgagacgag
tacattgcggatctcagaaaaactggaagccattcggcggaaatcgatcggttgctccaa
gcggacttggtcggttccaacacttaa
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