Pseudomonas knackmussii: PKB_1066
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Entry
PKB_1066 CDS
T03081
Name
(GenBank) peptidase M15D, VanX D-ala-D-ala dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
pkc
Pseudomonas knackmussii
Pathway
pkc01502
Vancomycin resistance
pkc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pkc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PKB_1066
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PKB_1066
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pkc01002
]
PKB_1066
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pkc01011
]
PKB_1066
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pkc01504
]
PKB_1066
Enzymes [BR:
pkc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
PKB_1066
Peptidases and inhibitors [BR:
pkc01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
PKB_1066
Peptidoglycan biosynthesis and degradation proteins [BR:
pkc01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
PKB_1066
Antimicrobial resistance genes [BR:
pkc01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
PKB_1066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
VanY
Motif
Other DBs
NCBI-ProteinID:
CDF82431
UniProt:
A0A024HC11
LinkDB
All DBs
Position
complement(1114704..1115453)
Genome browser
AA seq
249 aa
AA seq
DB search
MTDLLAAIPEAPEPDWATAFRMPIVECGEPMEALGTSQGFLVWPAYHRLGIPNALPECHA
RAGVFARLLQAAKLLPDGLRLVVLDAWRPFAVQQHLYDTLYDILRQHEPNADPAELTRRT
REFVAPPSTRAEAPSPHLTGGAVDISLCDQDGRWLDMGSLFDEATPRSYTRHYEDATDGH
GRAIRDRRRLLFNVMREVGFSNLSSEWWHYDYGDQLWAWHTGAPAAIYGPAQVPSLEQLW
RQQLHNLRP
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacctgctcgccgccatccccgaagcgccggagcccgattgggccacggccttc
cgcatgcccatcgtcgaatgcggcgagcccatggaagcgctgggcaccagccagggcttc
ctggtctggccggcctaccatcgcctgggcatccccaatgcgctgcccgaatgccacgcc
cgcgccggcgtgttcgcgcgcctgctgcaggcggcgaagctgctgcccgacggcctgcgc
ctggtggtgctggatgcctggcggcccttcgccgtccagcagcatctctacgacaccctc
tacgacatcctccgccagcacgaaccgaacgccgatccggccgagctgacccgtcgcacc
cgcgagttcgtcgccccgccgagcacccgcgccgaagcgccgagcccgcacctgaccggc
ggcgccgtggacatcagcctctgcgatcaagacggccgctggctcgatatgggcagcctg
ttcgacgaagcgaccccgcgctcctacacccggcattacgaagacgccaccgacggccac
ggccgcgccatccgcgaccgccgccggctgttgttcaacgtcatgcgcgaagtcggcttc
agcaacctgtccagcgaatggtggcactacgactacggcgaccagctgtgggcctggcac
accggcgcgccagcggcgatctacggcccggcgcaggttccatcgctggagcaactgtgg
cgccagcaactgcacaacctgcgaccgtag
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integrated database retrieval system
