Perognathus longimembris pacificus (Pacific pocket mouse): 125339456
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Entry
125339456 CDS
T08928
Symbol
Extl3
Name
(RefSeq) exostosin-like 3 isoform X1
KO
K02370
alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:
2.4.1.223
2.4.1.224
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
plop01100
Metabolic pathways
Module
plop_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
125339456 (Extl3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
plop01003
]
125339456 (Extl3)
Enzymes [BR:
plop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
125339456 (Extl3)
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
125339456 (Extl3)
Glycosyltransferases [BR:
plop01003
]
Glycan extension
O-Glycan
125339456 (Extl3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin
TPR_MLP1_2
ADIP
DUF1664
MscS_porin
Seryl_tRNA_N
EXOC6_Sec15_N
CCDC22_CC
TBK1_CCD1
THOC7
CENP-H
FapA
Motif
Other DBs
NCBI-GeneID:
125339456
NCBI-ProteinID:
XP_048186570
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All DBs
Position
21:complement(5107272..5134242)
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AA seq
919 aa
AA seq
DB search
MTGYTMLRNGGVGNGGQTCMLRWSNRIRLTWLSFLLFVILVFFPLIAHYYLTTLDEADEA
GKRIFGPRAGNELCEVKHVLDLCRIRESVSEELLQLEAKRQELNSEIAKLNLKIEACKKS
IENAKQDLLQLKNVISQTEHSYKELMAQNQPKLSLPIRLLPEKDDAGLPPPKVTRGCRLH
SCFDYSRCPLTSGFPVYVYDSDQFAFGSCLDPLVKQAFQATARANVYVTENADIACLYVV
LVGEMQEPAVLRPADLEKHLFSLPYWRTDGHNHVIINLSRKSDTQNLLYNVSTGRAMVAQ
STFYAAQYRPGFDLVVSPLVYAMSEPNFMGIPPQVPVKRKYLFTFQGEKIESLRSSLQEA
RSFEEEIEGDPPADYDDRIIATLKAVQDSKLDQVLVEFTCKNQPKPSLPTEWALCGARED
RLDLLKLSTFALIITPGDPRLVISSGCATRLFEALEVGAVPVVLGEQVQLPYQEMLQWNE
AALVVPKPRVTEVHFLLRSLSDSDLLAMRRQGRFLWETYFSTADSVFNTVLAAIRTRIQI
PAAPIREEVAAEIPHRSGKAAGTDPNMADNGDLDLGPVETEPPYASPKYLRNFTLTVTDL
ARSWNAAPGPFYLFPHTPFDPVLPSEAKFLGSGTGFRPIGGGAGGSGKEFQAALGGNVPR
EQFTAVMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPKLPSEDLLWPDIGVPIMVVRT
EKNSLNNRFLPWNEIETEAILSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRYHAWDL
PHQSWLYNANYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDMVDEYTNCEDIAMNFLV
SHITRKPPIKVTSRWTFRCPGCPQALSHDDSHFYERHKCINFFVKVYGYMPLLYTQFRVD
SVLFKTRLPHDNTKCFKFI
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgacggggtataccatgttgcggaatgggggcgtggggaacggaggtcagacctgtatg
ttgcgctggtccaaccgtatccggctcacgtggctcagtttcctgctcttcgtcattctg
gtgttcttcccgctcattgctcactattacctcaccactctggatgaggctgatgaggca
ggcaagcggatttttggtccgagggctggtaacgagctgtgcgaggtcaagcacgtgctg
gacctctgtcgcatccgcgagtctgtgagtgaggaactcttacagctggaggccaagcgg
caggagctcaacagcgagatcgccaagctgaacctgaagatcgaggcctgcaagaagagc
atcgagaacgccaagcaggacctgctgcagctcaagaacgtcattagccagactgagcac
tcctacaaagagctcatggcccagaatcagcccaagctttccctgcccatccgactgctc
cccgagaaggatgacgccggccttcctcccccgaaggtcacgcggggctgccggctgcac
agctgttttgattactcccggtgccctctcacctctggttttccggtctacgtttatgac
agtgaccagtttgcctttgggagctgtctggaccccttggtcaagcaggcttttcaggct
accgctcgagccaatgtgtatgttacagaaaatgcagacattgcttgcctctacgtggtc
ttggtaggagaaatgcaggagcccgcggtgctgcggcccgctgaccttgagaaacacttg
ttttctctcccatactggcggacagacggacataaccacgtcatcatcaatctgtcccgg
aagtcggacacgcagaacttactgtacaacgtcagtacaggccgggccatggtggcccag
tccactttctatgccgcccagtacagacctggcttcgacttggttgtgtccccactagtc
tatgccatgtcagagcccaacttcatggggatcccaccgcaggtgccagtgaagcggaag
taccttttcaccttccagggcgagaagatcgaatccctgcgatccagccttcaggaggct
cgctccttcgaggaagaaatcgagggtgaccctcccgccgactatgacgaccggatcatc
gccaccctgaaggcagtgcaggatagcaaactggatcaggtcctggtggaattcacctgt
aaaaaccagcccaagcccagcctgcccacggagtgggccctgtgtggggcgcgggaggac
cgcctggacttgctgaagctctccaccttcgccctcatcatcaccccgggggacccccgc
ctggtcatctcgtctgggtgtgccacgcggctcttcgaagccctggaggtgggcgctgtc
cccgtggtgctgggcgagcaggtgcagctcccctaccaggagatgctgcagtggaacgag
gcggccctggtggtgcccaagccccgggtgaccgaggtccacttcctgctgcggagcctc
tcggacagtgacttgctggccatgcggcgccaaggccgctttctctgggagacctacttc
tccaccgccgacagcgtttttaacaccgtgctggccgccattaggactcgcattcagatc
ccagctgctcccatccgggaggaggtggcagctgagatcccccatcgctcaggcaaggcc
gctgggaccgaccccaacatggctgacaacggggacctggacctggggccggtggaaacg
gagccgccctacgcctcccccaaatacctccggaacttcaccctgaccgtcaccgacctg
gcccgcagctggaacgcggcccccgggcctttctacctgttcccccacacgccctttgac
cccgtgctgccctcggaagccaagttcctgggctctgggacgggctttcggccgatcggg
ggtggcgccgggggctccgggaaggagttccaggcggcgctggggggcaacgtgccccgg
gagcagttcacggccgtgatgctgacttacgagcgggaggaggtgctgatgaactcccta
gagaggctcaacggcctcccttacctgaacaaggtggtggtggtgtggaactctcccaag
ctgccgtcggaggacctcctgtggccggacatcggcgtccccatcatggtggtgcgtact
gagaagaacagtttgaacaaccgattcctgccctggaatgagatcgagacagaggccatc
ttgtctatcgatgacgatgctcacctccgccacgacgaaatcatgtttgggtttcgcgtg
tggagagaggcgcgggaccgcattgtgggcttccctggccggtaccatgcgtgggacctc
cctcatcagtcctggctctacaacgccaactactcctgcgagctgtccatggtgctgacg
ggcgcggccttcttccacaagtattatgcctacttgtactcttacgtgatgccccaggcc
atccgggacatggtggacgagtacaccaactgtgaggacatcgccatgaatttcctcgtc
tcccacatcacgcggaagccccccatcaaggtgacgtcacggtggaccttccggtgccca
ggctgtccccaagccctgtcccatgacgactcccacttctacgagcggcacaagtgcatc
aacttctttgtcaaggtgtacggctacatgcccctgctgtacacgcagttcagggtggac
tccgtgctcttcaagacgcgcctgccccacgacaacaccaagtgcttcaagttcatctag
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