Poecilia mexicana (shortfin molly): 106910849
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Entry
106910849 CDS
T08022
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmei01009
]
106910849 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106910849 (hdac6)
04131 Membrane trafficking [BR:
pmei04131
]
106910849 (hdac6)
03036 Chromosome and associated proteins [BR:
pmei03036
]
106910849 (hdac6)
Enzymes [BR:
pmei01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
106910849 (hdac6)
Protein phosphatases and associated proteins [BR:
pmei01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106910849 (hdac6)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
106910849 (hdac6)
Membrane trafficking [BR:
pmei04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
106910849 (hdac6)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
106910849 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
FtsA
Motif
Other DBs
NCBI-GeneID:
106910849
NCBI-ProteinID:
XP_014833025
Ensembl:
ENSPMEG00000021121
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MDQEPETRRKSEFDSQKKIKQVDRVRHGVRIGSSGIRSEISQEISTPVTSAEELQVELPA
AQESFQVCVTAVGSVLQLVDRVLTSELRNGFAVIRPPGHHAQADQPNGFCVFNNMAVAAR
YAQKRHAVNRVLIVDWDVHHGQGIQYLFQEDPSVLYFSIHRYEGGAFWPHLQESDCSFVG
SGRAEGRTINLPWNKTGMSDADYITAFQQVLLPVACEFQPQLVLVSAGFDAAAGDPKGEM
CVHPQCFHILTHMLMSLAEGRLVLALEGGYDLQATAEGVAACVTALLGGACPPLNPPTAP
SDSALLSISETISALYPHWASLQVLAGPGPEGRVITAAANHSSPTPASINTSVATTTGLV
YDEKMMEHVNLWDRHHPEQPQRISKIFSKHQQQGLVARCHRIPARLATEEELAMCHSLQH
IERMKATAEMKPRDLHKLGNEFTSIFFSNQSFQCSQLAAGSCFNAVDAILSGQLSNGVAI
VRPPGHHAERDAPCGFCLFNTAALTARYAQKNSHDPQLRVLILDWDIHHGNGTQHMFEDD
NSVLYISLHRYDNGTFFPFSEDAAADRVGVAKGAGFNVNIAWNGGRMGDSDYLAAFHHVV
MPIAAEFNPGLVLVSAGFDAARGDPLGGYQVTPEGYAHLTHLLMSLAGGRVLIILEGGYN
LTSISDSMAMCTSVLLGDAPPSLATPFPPPHHCAVATIRKVIRQHAPYWRSLRITIPELV
QLALPSPKHRGKCSSQGRKSDKRPLPPAGQEMEGVEQLTQGLASLDITQAPPTPQEPPTM
EVKGDVESKLENSQSAESLQTQSVTMAAAESDPKGGAGSGEGAEPTSEGACGWSKPQVSL
ELTYSTEMGGDTLYVVDPLPWCPHLDAVKPLPPSGVDVFQVCSDCGSDSENWICLTCYEV
CCGRYVNEHMVTHGAVSEHPVVLSFSDLSVWCYLCESYVHHQVLFEAKNAAHFAKFGEDV
PPWS
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggaaccggaaacccgccggaagtctgagtttgactctcagaagaagataaag
caggtggaccgggtcaggcatggcgtccggatcggatcctccgggatccggagtgaaatc
agtcaggagatctccacgcctgtcacctcagctgaagagctgcaggtggagcttcctgct
gctcaggagtccttccaggtgtgtgtgacggctgttggttcagtcctccagctggtggat
cgggtcctgacctctgaactcaggaacggattcgctgtcatcagacctccaggtcatcac
gctcaggccgaccaacccaacggcttctgtgtgttcaacaacatggcggttgcggctcgc
tacgctcagaaacgccacgctgtcaacagggttctgatcgtggactgggacgtccatcat
ggtcagggcatccagtacctgttccaggaggatcccagtgtgctgtacttcagcatccac
agatatgaaggtggggccttctggcctcacctgcaggagtcagactgcagctttgtgggc
agtgggcgagctgaagggaggactatcaacctgccgtggaacaagacggggatgagcgac
gctgattacatcactgccttccagcaggtgctgctgccagtggcctgtgagttccagcct
cagctggttctggtctcagctggatttgatgctgcagccggagatccgaagggggagatg
tgtgtgcaccctcagtgtttccacatcctgacccacatgttgatgagtttggctgaaggt
cgactcgttctcgctctcgagggaggttatgaccttcaggcgacagcagagggcgtcgca
gcctgcgtcacagctctgctgggcggagcctgtcctcctctgaacccgcccactgctccc
tctgacagcgccttgctgtccatctctgagaccatctcagcactgtacccacattgggcc
tcgctgcaggttctggccggacccggtcctgagggacgtgtcatcacagcagcagccaat
cacagcagcccaacaccggcttccatcaacacatctgttgccacgacaacaggtcttgtt
tatgatgagaagatgatggagcatgtgaacctgtgggacaggcatcaccctgaacagcct
cagaggatttctaagatcttctccaaacatcagcagcagggattggtcgcccgttgccat
cggatacctgcccgcctggcgacagaggaggagctggccatgtgtcacagcctgcagcac
atcgagcggatgaaggcgacggcggagatgaaaccccgcgaccttcacaaactgggaaac
gagttcacctccatcttcttcagcaaccagagcttccagtgctcccagttggctgctgga
agctgcttcaacgccgtggacgccatcctgagtggtcagctgagtaacggcgtggccatc
gtccgccctccgggtcaccacgctgagagagatgctccctgcggtttctgtctcttcaac
accgccgctctcaccgctcgatacgcccagaaaaactcccatgatcctcagctgcgagtg
ctgatccttgactgggacattcaccatggcaacgggacgcagcacatgtttgaagacgat
aacagcgttctgtacatctctctccatcgctatgacaacgggacgttcttcccattctca
gaggacgccgctgccgacagagtgggcgtggccaagggggcaggctttaacgtgaacata
gcgtggaacggcgggcgaatgggcgactccgactacctggcagcgtttcatcacgttgtc
atgccgatcgctgccgagtttaaccccggactggttctggtgtcggccgggttcgacgcg
gcccggggagatccgctgggcggataccaggtgactcccgagggatacgcccatctcaca
cacctgctgatgtcactggctggggggcgtgtcctcatcatcctggagggtggttataac
ctgacgtccatttctgactccatggcgatgtgcaccagtgtgttgttaggagacgctccc
ccctcccttgccacacccttccctcctccccatcactgcgccgtggcaacaatcaggaaa
gtcatccgacagcacgccccctactggcgctccctgaggattaccattccagagttggtg
caattggccctcccctccccaaagcatcgtgggaaatgtagttctcaaggcaggaaatcg
gacaaacggccgctgccccctgctggacaggagatggagggtgtggagcagctcactcag
ggattggccagtctagatatcactcaagccccgcccaccccacaggaaccacccacaatg
gaggtcaaaggtgatgtggagtctaagttggagaacagccaatcagcagagagcctgcag
actcagagtgttaccatggcagcagcagaatcagaccccaaaggaggtgcggggtcaggc
gaaggggcggagcctacgtcagagggagcctgtggttggtcgaagcctcaggtgtctctg
gagctgacatacagcactgagatgggcggagacactctgtacgtggtggaccctctgccc
tggtgtcctcacctggatgccgttaagcctctccctccctcaggtgttgacgtcttccag
gtgtgcagtgactgcggttctgactctgagaactggatctgcctcacctgctatgaggtg
tgctgcggtcgctacgttaatgagcacatggtgacgcatggcgccgtgtcggagcaccct
gtggtgctcagcttctctgatttgtccgtttggtgctacctgtgtgagtcttacgtccac
caccaggttctgttcgaggccaagaacgctgctcacttcgccaagtttggagaggatgtt
cctccctggagctga
DBGET
integrated database retrieval system
