Podarcis muralis (common wall lizard): 114583291
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Entry
114583291 CDS
T06059
Symbol
BARD1
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114583291 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114583291 (BARD1)
04121 Ubiquitin system [BR:
pmua04121
]
114583291 (BARD1)
03036 Chromosome and associated proteins [BR:
pmua03036
]
114583291 (BARD1)
03400 DNA repair and recombination proteins [BR:
pmua03400
]
114583291 (BARD1)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
114583291 (BARD1)
Ubiquitin system [BR:
pmua04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
114583291 (BARD1)
Chromosome and associated proteins [BR:
pmua03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
114583291 (BARD1)
DNA repair and recombination proteins [BR:
pmua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
114583291 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4
zf-RING_UBOX
NIBRIN_BRCT_II
Prok-RING_4
zf-RING_10
zf-C3HC4_3
DUF716
RTT107_BRCT_5
Siva
Motif
Other DBs
NCBI-GeneID:
114583291
NCBI-ProteinID:
XP_028560462
LinkDB
All DBs
Position
1:137272059..137332229
Genome browser
AA seq
779 aa
AA seq
DB search
MRAAAALRGRSGNQPEGRMEAEPRGRRWKETGAALARLAEALSCSQCRDILKKPVNIGGC
EHVLCLNCVGDSSGTACPVCHVPAMVQDVKVNRQLDNIVKLHSKLQSLWGRDLSGSGENL
SDPGDVVCETGSKKHQQLKEDFNPRRKSKKLTMRKRPEKTEQAVKGQDGQPHAPASTHDF
SLSPTQEPFKEQKNPNLKKLRKKTLTDINSPPRLLKERQKKTSGHDEESTSEAKVVFCSR
SLDIPSPDPKSTSEHKSVMRAELAQGESEVSVDAIVKLTEKSSRDNVSCSCGVVEENLSS
EECLLSRGEMAPLKRRRQQSRLPTPLHKQPSRKEHSTPGSLALLKVSPRPSPKDSLGDSL
PTIDCIRCYPPTPSASSSPTMRNSEHACNQKTSKTAHLSNTAYQKEAQLTESFSRKSPNS
LPAKRNHKGETLLHIASVEGDLSAVKHLLKSGADPNVKDYAGWTPLHEACNHGHKEVVEL
LLQHGALLNAAGYQNDLPLHDAVKNGHTSIVELLLLHGASRNVVNIFGHKPVDYAETENM
KSLLMLPAKNDSSTTTQCPEQLSLNQPREGPVVLLGSGLNPVQQALLSKLAKVLKARICM
AFNSTVTHVVIPENSTCSTMKCMLAVLTGCWILTFQWVDACLKTGAREQEEKYEIDGGPR
QGRLNKEQLLPKLFDGCYFYFLGMFKEHNKDDLKELVKAGGGQILLRKPKSDSDVTQTIN
TVAYHAEIASDQSSCTQYIIYDVSSNYKPEKIRQGKVWEAPSKWLIDCVVSFQLLPVKK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgagggccgcggcggcgctgcgggggcgctccgggaaccagcccgagggacgcatggag
gccgagccaagaggccgccggtggaaggagaccggcgccgccctggcgaggctggccgag
gccctcagctgctcccagtgtagggacattttgaagaaacctgtgaacataggaggctgt
gaacatgtcttatgcctaaattgtgtgggtgacagcagtggaacagcttgcccggtgtgt
cacgtgccagccatggtacaagatgtgaaagtaaacaggcagctggacaacattgtcaaa
ctgcacagcaaactgcagagtttgtggggcagggacttatcaggttcaggagagaacctg
tctgaccctggagatgtagtttgtgagacaggaagtaagaagcatcaacaactaaaagag
gacttcaatcctcgtaggaagagcaagaaattgaccatgcgaaagagaccagagaagaca
gaacaggctgtgaagggccaggatggccagcctcatgccccagcttccactcatgatttt
agtctctcccccactcaagagccttttaaagagcaaaagaaccccaatctgaaaaagctg
aggaaaaagactttaacagacatcaacagcccgccaagattgctcaaagaaagacagaaa
aagaccagtggacatgatgaagagagcacaagcgaagcaaaggtggtgttttgcagtcgg
tcattggatatccccagtccagaccccaaaagcacatcggagcacaagtctgtaatgagg
gcagagcttgcacagggtgagagtgaagtcagtgtggatgccattgtgaaacttacagag
aagagcagcagggataacgtgtcttgttcatgtggtgttgtggaggagaacttgagttct
gaagagtgcctcctctctagaggggaaatggctccactaaaacgtagaaggcagcaaagc
agattgcctactcctttacacaaacagcccagcaggaaagagcatagcacccctggaagt
ttagcgctgctgaaggtgtccccaaggccatcacccaaagattcccttggggattctttg
cccaccattgactgtataaggtgttatccacctacaccatctgctagctcttcaccaaca
atgagaaactctgagcatgcatgtaaccagaaaacttccaaaacagcacatctgtccaat
actgcttatcaaaaagaggcacagctaactgagtctttctccaggaaatctcccaatagc
ctgccagccaagagaaatcataaaggggagactttgctccacatcgcttctgttgagggt
gatctttctgctgttaagcacttactgaaaagtggagcagatcccaatgttaaagactat
gctggatggactccactgcatgaagcttgtaatcatggacataaggaggtcgtggagctg
ttgctacaacatggggcactcctgaatgcggctgggtatcaaaatgatttgccgcttcac
gatgctgtcaagaatggacatacaagtattgttgaactgctgcttctgcatggagcttct
cgaaacgtagttaatatatttggtcacaaacctgtggattatgctgaaacagaaaatatg
aaatcacttctgatgctcccagcaaagaatgactcttctactactactcagtgtccagaa
caattaagcctaaatcaaccaagagaaggacctgttgtgctccttggaagtggtcttaat
ccagttcagcaagcattgttgagcaaactggcaaaggttctgaaagctagaatatgtatg
gcatttaacagcacagtgacacatgttgttatccctgagaattctacatgcagtactatg
aagtgcatgctggctgttttgactggatgctggatcttgacatttcagtgggtagatgcc
tgcctgaagacaggtgctcgggagcaagaagagaagtatgaaatagatggtggcccacgc
caaggccgactgaacaaagagcagctgttaccaaagttgtttgatggctgctacttctat
tttttgggaatgtttaaggagcacaacaaggatgatctgaaggaattggtgaaagcaggt
ggaggacagatactgctgaggaaacccaaatcggatagtgatgtgacacagacaatcaat
actgtagcctatcatgctgagattgcttctgaccagagttcctgcacacagtatatcatc
tacgatgtctcttctaactacaagccagagaaaattcggcaaggaaaggtttgggaggca
ccgtctaagtggcttatagactgtgtggtgtcatttcagctattacctgttaagaaataa
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