Prevotella melaninogenica: HMPREF0659_A5051
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Entry
HMPREF0659_A5051 CDS
T01286
Symbol
ddpX
Name
(GenBank) D-Ala-D-Ala dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
pmz
Prevotella melaninogenica
Pathway
pmz01502
Vancomycin resistance
pmz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HMPREF0659_A5051 (ddpX)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HMPREF0659_A5051 (ddpX)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmz01002
]
HMPREF0659_A5051 (ddpX)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmz01011
]
HMPREF0659_A5051 (ddpX)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pmz01504
]
HMPREF0659_A5051 (ddpX)
Enzymes [BR:
pmz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
HMPREF0659_A5051 (ddpX)
Peptidases and inhibitors [BR:
pmz01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
HMPREF0659_A5051 (ddpX)
Peptidoglycan biosynthesis and degradation proteins [BR:
pmz01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
HMPREF0659_A5051 (ddpX)
Antimicrobial resistance genes [BR:
pmz01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
HMPREF0659_A5051 (ddpX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
VanY
Peptidase_M15_4
Motif
Other DBs
NCBI-ProteinID:
ADK96496
LinkDB
All DBs
Position
I:78811..79542
Genome browser
AA seq
243 aa
AA seq
DB search
MKRVFYLLFAAIFFAGSMHAQTPTMSRRQAAGRSMEQQGLVNIKHVVPSIKVALMYARTD
NFCNRVLYHDLRDAYVLPACAEALRKAQAELKRRRPDLSLCIFDATRPMSVQQTMWNTVK
DTPKYFYVSNPAHGGGMHNYGMAVDISICKASWNDATWRDGATRCLIDTIPMGVKVDHMG
IASHIDKENDLIARRLISREALANRRLLREVMSAAGFMPLRTEWWHFNLCTRAWAKQNLR
VVR
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtcttttatctgctatttgcagccatattctttgctggtagtatgcacgca
cagacaccaacgatgagtcgtcggcaggctgctggtcggtcaatggagcagcaggggttg
gtaaatataaagcatgttgtaccttctatcaaggtggctttgatgtatgctcgtacagat
aacttctgtaatcgtgtactctatcatgaccttcgtgatgcctacgtgctgcccgcttgt
gcagaagcattgcgtaaagcgcaggcggagttgaagcgtcgtcgtcctgatttgagcctt
tgtatcttcgatgccacacgaccgatgagcgtacagcagacgatgtggaatacagtgaaa
gataccccaaagtatttctatgtgtctaatcctgcgcacggaggaggtatgcataactat
gggatggctgtagacatcagtatctgcaaggcctcatggaatgatgctacatggcgtgat
ggtgccacacgttgcttgatagatacgattccaatgggtgtgaaggtagaccacatgggg
atagccagtcatattgataaagaaaatgacctcattgcccgtcgtcttatctctcgtgag
gcattagctaaccgcagactccttcgtgaggtgatgagtgctgccggtttcatgccttta
cgtaccgagtggtggcacttcaacctttgtacaagggcttgggcaaagcagaatttgagg
gtggtgaggtaa
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