Pieris napi (green-veined white): 125059937
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Entry
125059937 CDS
T08706
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pnap
Pieris napi (green-veined white)
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pnap01009
]
125059937
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnap03019
]
125059937
04131 Membrane trafficking [BR:
pnap04131
]
125059937
03036 Chromosome and associated proteins [BR:
pnap03036
]
125059937
Enzymes [BR:
pnap01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125059937
Protein phosphatases and associated proteins [BR:
pnap01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125059937
Messenger RNA biogenesis [BR:
pnap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125059937
Membrane trafficking [BR:
pnap04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125059937
Chromosome and associated proteins [BR:
pnap03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
125059937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
125059937
NCBI-ProteinID:
XP_047520597
EnsemblRapid:
ENSPNPG00015040640
LinkDB
All DBs
Position
20:complement(4141020..4157553)
Genome browser
AA seq
1073 aa
AA seq
DB search
MSSASPPTVPGRQSGGDAKKTQPPSSIVTRNGARKAKIQTRARTAATSKPSASVVAAKRK
AQLKKKTTVETVLRDHYQITMDAKTKVKGPTGFVTEPRMVEHKCLWDENYPENPLRLISV
INRCHELNLIEQCTEISPRAASKEEILNLHDVSVYSMMEKTHRNNDVEYLEDISSCYDAV
YIHPSTHELALIAAGSTINLVDHLIKGDIQNGAAFVRPPGHHAMKAEPCGYCIYNNVALA
AKHALQHGLSRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYEHGSFWPNLRQSNFDYI
GEGKGEGFNFNVPLNQIGMKDADYLAIWYQLLLPMAFEYQPELILISAGYDAAIGCPEGE
MLITPACYATLTHLLMGVCSRIGVVLEGGYCPTSLAEGAALTLRTLLGHPPPMGEALTEP
TDSIQESILNCIYAHKNHWKCFYQPTYSMYSDVKNVCDVDKDKHTVIVKWEGDETRPDKY
PTRNCYPLQSIETKRNIADRLRQLQLATDLTLPEYPVCYIYDEAMLKHKNICEPGHVECP
QRIMRVHERHMDFGLIDRVHLLTARCATDEDILAVHSEKHLTRLKDLSSMKLRELHNTKD
TYDSVYFHPDSLESATTAAGCVLQMVDSVLSGQAGSGVCVVRPPGHHADKSTPCGFCLIN
NVAIAAQYALKRVKRVLILDWDVHHGNGTQSITLDNEQILYVSLHRYDNGTFFPQSRDAD
HTVVGTGKGEGFNVNIPWNKRGMGDAEYIAAFTQVVMPIAREYHPDLVLVSAGFDACFGD
PIGGCKVSPECYGVMTHMLRSLAGGRVILCLEGGYNITSISYAMAMCTKALLGDPIYTHY
DPNASCNYSAIESINDVIKVHKKYWKNLKFQLALPIENVLDNVSPKSTLEDGLANLTIGC
TDGIHCGTDDEGEGTSKNTDSGSKDQSPETDSSKPKTLVDFLSDNMQAIVDGEMFAVVPL
PGCPHLDSLYAIPSDVKFQQGVKCTDCDHTIENWVCLHCYITACGRHINGHMAAHYSTTH
HPLSLSLADLSVWCYPCDAYVDNPLLFDAKNNAHKCKFGEEMPWCYKDGIHMA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagcttcaccgccaacagtacctggacgccagtcaggtggagatgctaagaag
acacaaccaccatctagcattgttactcgaaatggtgcaagaaaagctaaaatacaaaca
cgtgcccgtacagccgctacttcgaaaccttcagcatctgttgtggcagcaaagagaaaa
gcacaactgaagaagaaaacaacggtagagacagttttgagggatcattatcaaattaca
atggatgcaaagaccaaagtaaaaggtcctacaggttttgttactgagccacgcatggta
gaacataagtgtttgtgggatgagaactatccagaaaatccactgcgactcataagtgtc
attaatagatgtcacgagttaaacttaatagaacaatgtactgaaataagtccccgggct
gcatcaaaagaagaaattttaaatttacatgatgtatctgtttattctatgatggagaaa
actcaccggaacaatgatgttgaatatttagaggatatatcgtcgtgttatgacgctgtt
tacatacacccaagtactcacgaactggctctcatagcagcgggttctacaataaacctg
gtcgatcacttaataaaaggggatatacagaatggagcagcatttgttaggcctccagga
caccatgctatgaaggcggagccttgcggctattgtatatacaacaatgtggcacttgct
gctaaacatgcacttcaacacggacttagtagaatacttatagttgactgggatgtacat
catggccaagcaacacaacaaatgttttataacgatccaagggtcgtatatttctcgata
catcgctatgagcacggatcgttttggcccaatttgcgtcaatccaatttcgactacatc
ggcgaaggaaagggggagggttttaacttcaatgttcccctgaatcaaattgggatgaaa
gatgccgactaccttgctatatggtaccagttactcctaccgatggcttttgagtaccaa
ccggagctgatcctgatatcggcgggttacgacgcagcgatcggatgtccggagggcgag
atgctgataacaccagcgtgttatgcgacattgacgcatttgctcatgggcgtatgttcc
cgaattggagtcgtgttagaaggagggtattgccctacgtccttagcggaaggagctgcc
ttaactttacgaacgctgctaggtcacccgcctcccatgggcgaagctcttactgagccc
acggactcaattcaagaatccatcttaaactgtatttatgcgcacaaaaatcattggaag
tgtttctaccaacccacatatagcatgtactcggatgtaaagaacgtctgcgacgttgat
aaagacaaacatactgttatagtgaagtgggagggagacgaaaccagaccggataaatat
ccaacaagaaattgttatcccttacaaagtattgaaacaaaaaggaatattgcagataga
ttaagacagttgcagttagcaactgatttaacgctgcccgagtatccagtgtgctacatt
tatgatgaggccatgctgaaacataaaaatatttgtgaaccgggtcacgtggaatgtccc
caacgaataatgcgtgtccacgagcgacatatggactttggtcttatagatcgcgtgcac
ttgctaacagcgagatgtgccaccgatgaagacatactcgcagtgcattcggagaaacat
cttaccagattaaaagacttgtcatcgatgaagcttcgagagctccacaatacaaaggac
acatacgattccgtgtatttccatcctgactcgctagagagcgctactacggcagccgga
tgtgttttgcagatggttgactcggtactatccgggcaagccggatccggagtatgcgtg
gtccgtccacccgggcatcatgcggataaaagcacaccctgtggcttctgtctcatcaac
aatgtggccatcgcagcacaatacgccttaaaacgcgtaaaacgagtgttaatactggat
tgggacgtacatcatgggaatgggacgcagagtattacgttggacaacgagcagatccta
tacgtatccctacatcgctacgacaatggcacgttcttcccgcaatcacgcgatgctgac
catacagtggttggaactgggaaaggcgaaggattcaacgttaatattccctggaataag
cgcggtatgggagacgcagaatacatagcggcgttcacgcaagttgtaatgccgatagcg
agagagtaccatcccgatcttgttctggtatcagccggctttgatgcctgttttggagat
ccaatcggaggttgcaaagtatcaccagaatgctacggagtgatgactcacatgctcaga
agtctagctggtggccgtgtcatactttgtctggaaggtggttataacataaccagtatc
tcgtatgctatggctatgtgtaccaaagctcttctaggcgacccaatttacacacattac
gacccaaacgcaagttgcaactattcagctattgaatcaataaacgacgtgatcaaagta
cacaaaaagtattggaaaaacctaaagtttcaactggctttaccaatcgaaaatgttcta
gacaatgtctcaccgaaatcgacgttagaagatggactagccaatttaactataggttgc
actgacggcatacactgcggtacggatgatgaaggcgagggtacttcaaaaaatacagat
tccggctcgaaggaccagagtccagaaactgatagttccaaacctaagacgctagtagat
tttttatcggataatatgcaagctatagttgatggagaaatgtttgctgtagtaccttta
ccgggatgtcctcatttggattcattgtacgcaataccgagcgatgtgaagtttcaacaa
ggcgttaaatgtactgactgtgatcatactattgaaaattgggtctgccttcattgctat
attacggcctgcggtcgacatataaacggccatatggcagcgcactattctaccacgcat
catcctctatctctttctctcgctgacctctccgtatggtgctatccctgtgatgcatat
gttgacaatccattgctctttgacgccaagaataatgcgcacaaatgcaaattcggtgaa
gaaatgccctggtgctataaagacggtatccatatggcataa
DBGET
integrated database retrieval system
