Pteronotus mesoamericanus (Parnell's mustached bat): 129065216
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Entry
129065216 CDS
T09558
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam04613
Neutrophil extracellular trap formation
ppam05014
Amyotrophic lateral sclerosis
ppam05034
Alcoholism
ppam05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
129065216 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
129065216 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129065216 (HDAC6)
09165 Substance dependence
05034 Alcoholism
129065216 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppam01009
]
129065216 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129065216 (HDAC6)
04131 Membrane trafficking [BR:
ppam04131
]
129065216 (HDAC6)
03036 Chromosome and associated proteins [BR:
ppam03036
]
129065216 (HDAC6)
Enzymes [BR:
ppam01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129065216 (HDAC6)
Protein phosphatases and associated proteins [BR:
ppam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129065216 (HDAC6)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129065216 (HDAC6)
Membrane trafficking [BR:
ppam04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129065216 (HDAC6)
Chromosome and associated proteins [BR:
ppam03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
129065216 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
129065216
NCBI-ProteinID:
XP_054422439
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MTSTGQDCTTTRQRRSRHNPQSPPLDSSIISKPGVKKGAGLRSSPKLAEVKKKGRMKKLS
QAAEQDLIVGLQGLDLNLEAKTLPSTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
REGLVGRCVSFQARFAEKEELMLVHSLEYIDLMESTQYMNEGELRILADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGAEIQNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQE
KHGIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQG
QGYTINVPWNQVGMRDADYIAAFLRVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAHLTHLLMGLAGGRLILSLEGGYNLHSLAEGVSASLHTLLGDPCPMLESPGAPCTSA
LSSLSCTLEALEPFWEILVRSGDTLDGDNVEGDNAEEEEEGPWPPPALPTLMWPVLQART
GLVYDQRMMDHYNFWDNHHPEIPQRVSRIMCRLEELGLAERCLTLPARPATDAELLTCHS
AEYVSRLRATEKMKTRELHRESANFESIYICPSTFACAQLATGATCCLVEAVLAGEVLNG
VAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQSVSGHALRILIVDWDVHHGNGTQHIFE
EDPSVLYLSLHRYDHGTFFPMGDEGASNQVGRSAGTGFTVNVAWNGPRMGDSEYLAAWHR
LVLPIAYEFNPELVLVSAGFDAAWGDPLGGCQLSPEGYAHLTHLLMGLAGGRIILILEGG
YNLTSISESMAACTRTLLGDPPPLLTLSRPPLPGALASITETIQVHRRYWRSLRATKVED
KEGPFSSKSVTKEATQPANLESTKRLTTVEGYTLDAGTGKAASAPSVQEFTPAQTNSETA
AVQLTQDRSSEAATGRATLDQTTSEAATLDQTTSKAATLDQTTSEGATLDQTTSEEPVGG
AELIQTPQVSCADSQNPPTSPVQGATPQISLSPLTGNLRTLELGNKAQEAPESHIAEEER
LRGETAGGQDTDDSVQAFGDTDQAMFYAVTPLLWCPHLVAVCPIPEGGLDVTQPCQECGA
LQENWACLSCYEVYCSRYINAHMLQHHEDSGHPLVLSYVDLSTWCYQCQAYVHHQALLDV
KNIAHQNKFGEDMPYSH
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaggattgcaccacaaccaggcagcgaaggagtaggcacaacccc
cagtcgcccccccttgactccagcatcatctcgaagccaggtgttaaaaagggtgctgga
ctccgctccagccccaaactagcggaggtaaagaagaaaggaagaatgaagaagctcagc
caagcagcagagcaagacctaattgtggggctgcaagggctggatctgaaccttgaggcc
aagacactgcctagtactggcttggtgtttgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaaggcccagagcggctccatgccatcaaggagcagctgatc
cgggagggcctcgtgggccgctgtgtgtcctttcaggcccggtttgctgagaaggaggag
ctgatgttggttcacagcctagaatacattgatctgatggagtcgacccaatacatgaat
gagggagaactccgcatcctagcagacacctatgactcagtttatctgcatccgaactca
tacacttgtgcctgcctggcttcaggctctgtcctcaggctggtggatgcggtcctgggg
gccgagatccagaatggcatggccatcatcaggcctcctggacaccatgcccagcatagt
ctcatggatggatattgcatgttcaaccatgtggctgtggccgctcgctacgctcaagag
aagcatggcattcagagggtccttattgtggattgggatgtgcaccatggtcaaggaaca
caattcacctttgaccaggaccccagtgtgctctatttttccatccaccgctatgagcag
ggtcggttctggccccacctgaaggcctctaactggtccaccacaggttttggccaaggc
cagggatataccataaatgtgccttggaaccaggtggggatgcgagatgccgactacatc
gctgccttcctgcgagtcctgctgcctgtcgcccttgagttccagccccagctggtcctg
gtggctgctggatttgacgccctccaaggagaccccaagggcgagatggctgccactccc
gcagggtttgcccatctaacccacctgctcatgggtctggcaggaggcaggctgatccta
tctttggagggtggctacaaccttcactccctggctgagggtgtcagcgcctcactccac
acccttctcggtgacccttgtcccatgctagagtcccctggtgccccctgcacaagcgcc
ctgtcgtcgctgtcctgcactctggaagccttggagcccttctgggagatccttgtgaga
tcaggtgacaccctggacggggacaatgtggagggggacaacgcagaggaggaggaggag
ggaccatggccaccccctgcgctcccgaccctgatgtggccagtgttgcaggctcgcaca
gggctggtctatgaccagaggatgatggatcactacaacttttgggacaaccaccacccc
gagataccccagcgtgtctcacggatcatgtgccgtctggaggagctgggccttgctgag
cgctgtcttaccctgcctgcacgtcctgccacagatgctgagctactcacctgccacagt
gctgagtacgtgagtcgtctgcgggccacagagaaaatgaaaacccgggagctgcaccgg
gagagcgccaactttgagtccatctacatctgtcccagcacctttgcctgtgcacagcta
gccactggtgccacgtgctgtcttgtggaggctgtgctggcgggagaggttttgaatggt
gttgccgtggtgcgtcctcctggacaccacgcagagcaggatgctgcttgcggtttctgc
ttttttaactctgtggctgtggcagctcgccatgcccagtccgtcagtgggcatgcactg
cggatcctgattgtggactgggatgtccatcatggtaatggaactcagcacatatttgaa
gaggaccccagtgtgctctacctttccctacaccgctatgatcacggcaccttctttccc
atgggggacgagggcgccagcaaccaggtgggccggtccgcaggcacgggctttaccgtc
aatgtggcgtggaatgggcctcgcatgggtgactccgagtacctggctgcttggcatcgt
ctggtgcttcccattgcctatgagtttaacccagaactggtgctggtctcagctggcttt
gatgctgcatggggagaccctctggggggctgccagctgtcacctgagggctacgcccac
ctcacccacctgctgatgggccttgctggtggtcgcattatcctaatcctagagggtggc
tataacctgacatccatctcagagtccatggctgcctgtacccgcaccctccttggggat
ccgccacccctgctgaccctgtcacggcccccactaccaggggccctggcctcaatcact
gagaccatccaagtccatcgcagatactggcgcagcttgcgggccacaaaggttgaagac
aaggaaggacccttcagttctaagtcagtcaccaaggaggcaacccaaccagccaatctt
gaatcaaccaagaggctgaccacggtagaagggtacactctggatgcaggcacggggaag
gctgcctcagcaccatctgtgcaagagttcactccagcccagactaactcagagacagct
gcggtacagctcactcaggaccggtcttcagaggcagccacagggcgagccacgctggac
cagaccacctcagaggcagccacgctggaccagactacctcaaaggcagccacgctggac
cagactacctcagagggagccacgctggaccagaccacctcagaggagcctgtgggagga
gctgagctgattcagacccctcaagtctcatgcgctgacagccagaatcctccaacctca
cctgtgcaaggagccacaccccagatatccctcagtccgctgactgggaatctcaggacc
ttagaactaggcaacaaggctcaggaggccccagagtctcatatcgcagaagaggagagg
ctacgaggagagacagctggaggtcaggacacggatgattcagtgcaggcgtttggggac
actgaccaggctatgttttatgctgtgacaccattgctctggtgtccccatttggtggca
gtatgccccattcctgaaggaggcctggatgtgacccaaccttgtcaggagtgtggagca
cttcaggagaactgggcatgtctgtcttgctacgaggtctactgcagtcgttacatcaat
gcccatatgctccagcaccacgaagactcaggacatccactggtcctcagctacgttgac
ctgtctacctggtgttaccaatgtcaggcctatgttcaccatcaggctctcctagatgtg
aagaacatcgcccaccagaacaagtttggggaagacatgccctactcacactaa
DBGET
integrated database retrieval system
