Pollicipes pollicipes (gooseneck barnacle): 119104500
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Entry
119104500 CDS
T08250
Name
(RefSeq) DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119104500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppoi03400
]
119104500
Enzymes [BR:
ppoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119104500
DNA repair and recombination proteins [BR:
ppoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
119104500
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
119104500
BRITE hierarchy
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
HHH_5
HHH
Cdd1
DUF4332
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
119104500
NCBI-ProteinID:
XP_037084109
EnsemblRapid:
LOC119104500
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MSKRKLQPSASNPNQDYCDFLLELADFEKNVSRNIYKHNAYRKAASALSRHPVRVSSGSE
ARQLPGVGRKIADKIDEFVQTGRLGKLDKIRASDEAVAIGQLSRVSGVGPAKARELFSAG
VTSLEELRRRPELLNHHQSLGLRYVSEFEARIPRTEAAALEGHVCSRLAALDPLYCATVC
GSYRRGAESSGDVDFLLTHPAFTSSVNEKPARGSSANQKPAKGSAANQKPAHGAAANEKT
GGQLLRAAVDQLKNEGFITDTLSHGDTKFMGVCLLPGERYTVHRRIDIRLVPHDQYFCAV
LYFTGSDEFNRQMRAHALEQRFTLNEYTLRPLGATGTPGEPVPVTSEEEIFEYLQYPYRR
PEERSL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaggaagctacagccaagtgcatcaaacccgaatcaagactactgtgatttt
cttttagaacttgcggacttcgagaagaatgtctcgaggaacatttacaaacacaacgcc
tacaggaaggcggcctcggcgctttcccgccacccggtgcgcgtcagctccggctcggag
gcgcgccagctgcccggcgtcgggcgcaagatcgccgacaagatcgatgagttcgtgcag
accggccgtctgggcaagctggacaagatccgagccagtgacgaggcggtggccattggt
cagctgtcccgcgtgtctggcgtggggccggccaaggcccgagagctcttcagcgccggc
gtcacctcgctggaggagctgcggcggcggcccgagctgctcaaccaccaccagagcctg
ggactgaggtatgtgtctgagttcgaggcacgcatcccccgtacggaggcggctgcttta
gaggggcacgtgtgcagcaggctggcggctctggacccgctgtactgcgccaccgtctgc
ggcagctaccggcgaggcgccgagtcaagcggcgacgtcgacttcctcctcacgcacccc
gcgtttacgtcgtcagtcaatgaaaaaccggctcgcggctcctcagccaatcagaaaccc
gctaagggatcggccgcgaatcagaagccagcccacggggcggcagccaatgagaagacg
ggcggccagctgttgagagccgcggtggaccagcttaagaacgagggcttcatcaccgac
acactgtcccatggcgacaccaagtttatgggtgtgtgcctcctgcccggcgagcggtac
accgttcaccggcgtatcgacatccgtctggtgccgcacgaccagtacttctgcgccgtg
ctgtacttcaccggcagtgacgagttcaacaggcagatgcgggcccacgcgctggagcag
cggttcacgctgaacgagtacacgctgcgtccgctgggcgccaccggcacgccgggcgag
ccggtgccggtgaccagcgaggaggagatcttcgagtacctgcagtatccgtaccgccgg
ccggaagagcgcagcctctga
DBGET
integrated database retrieval system
