Poeciliopsis prolifica (blackstripe livebearer): 129352934
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Entry
129352934 CDS
T09758
Symbol
hdac6
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprl01009
]
129352934 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129352934 (hdac6)
04131 Membrane trafficking [BR:
pprl04131
]
129352934 (hdac6)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129352934 (hdac6)
Enzymes [BR:
pprl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129352934 (hdac6)
Protein phosphatases and associated proteins [BR:
pprl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129352934 (hdac6)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129352934 (hdac6)
Membrane trafficking [BR:
pprl04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129352934 (hdac6)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
129352934 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
129352934
NCBI-ProteinID:
XP_054878122
LinkDB
All DBs
Position
Unknown
AA seq
1076 aa
AA seq
DB search
MSGFVPLQVDGSGMASGSDPPGSGVKSVRRSPRLSPQAGGGVSLQEVKRRGRMERSREEE
DLSGRLKTLDLCSRSAASGTGLVYSQIFTHHQNLWDTSHVESPDRVTAIMSELQRKELLS
RCFTVEPREATEEELLLAHTKIYVDTMKATRTMTQTELQSLSDRYDSVYLHPESFQVCVT
AVGSVLQLVDRVLTSEVRNGFAVIRPPGHHAQADQPNGFCVFNNMAVAARYAQKRHAVNR
VLIVDWDVHHGQGIQYLFQEDPSVLYFSIHRYEGGAFWPHLQESNSSFVGSGRAEGRNIN
LPWNKVNGMSNADYIIAFQQVLLPVACEFQPQLVLVSAGFDAAAGDPKGEMCAXPQCFHI
LTHMLMSLAEGRLVLALEGGYDLQATAEGVAACVTALLGGACPLLDPPTAPCDSALQSIS
ETISALYPHWASLQVLAGPGPEERFITAXANHSSPTPATINTXVAMTTGLVYDEKMMEHE
NLWDRHHPEQPQRISKIFSKHQKQGLVARCHRIPARLATEEELALCHSLQHIEQMKATAE
MKPRDLHRLGNQFTSIFFSNQSFQCAQLAAGSCFNAVDAILSGQLSNGVAIVRPPGHHAE
RDAPCGFCLFNTTALAARYAQKNSHDPQLRVLILDWDVHHGNGTQHMFEDDNSVLYVSLH
RYDSGTFFPFSEDAAADRVGVAKGAGFNVNVAWSGGRMGDSDYLAAFHHVVMPIAAEFNP
GLVLVSAGFDAARGDPLGGYQVTPEGYAHLTHLLMSLAGGRVLIILEGGYNLTSISDSMA
MCTSVLLGDAPPSLTTPFPPHPCAVATIREVIRQHAPYWRSLRITVPESVQLALPAPKHR
GKRSSLGRKSDKRPPPAGQEGATMQGVEQLTQGLASLDITQAPPSPQEPPTMEVKGDVES
ELENSQSAESMQTQSVTTAAAESDRKEGAGSGEGAELTSEGTCGWSTPQVSLELTCSTEM
GGDALYVVDPLPWCPHLDAVKPLPPSGVDVFQPCGDCGSDAENWICLTCYQVCCGRYVNE
HMVTHGAVSEHPVVLSFSDLSVWCYLCESYVHHQVLFEAKNAAHFAKFGEEVPPWS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgtctggttttgttccgctgcaggtggacgggtcaggtatggcgtccggatcggatcct
ccaggatccggagtgaaatcagtcaggaggtctccacgcctgtcacctcaggctggcgga
ggagtcagcctccaggaggtgaagaggcgaggacggatggagaggagcagagaggaagag
gatctgagtggacggctgaaaacgctggatctgtgcagcaggtctgcagccagcggaacc
ggactggtttactcccagatcttcacgcaccaccagaacctctgggataccagccatgtg
gagagtccagacagagtgacagccatcatgtcagagctgcagaggaaggagctgctgagc
cgctgcttcaccgtggagcccagagaagcaacagaggaggagctgttgctggctcacacg
aagatttatgtggacaccatgaaggcgactcggacgatgacgcagacggagctgcagagt
ctgtctgacagatacgactcagtctacctccaccctgagtccttccaggtttgtgtgacg
gctgttggttcagtcctccagctagtggatcgggtcctgacctctgaagtcaggaatgga
ttcgccgtcatcagacctccaggtcatcacgctcaggccgaccagcccaacggcttctgt
gtgttcaacaacatggcggtcgcggctcggtacgctcaaaaacgccacgccgtcaacagg
gttctgatcgtggactgggacgttcatcatggtcagggcatccagtacctgttccaggag
gatcccagtgtgttgtacttcagcatccacaggtatgagggcggagccttctggcctcac
ctgcaggagtcaaactccagctttgtgggcagcgggcgagctgaagggaggaacatcaac
ctgccctggaacaaggtgaacgggatgagcaacgctgattatatcatcgccttccagcag
gtgctgctgccggtggcctgtgagttccagcctcagctggttctggtctcagctggattt
gatgctgcagccggagatccaaagggggagatgtgtgcannccctcagtgtttccacatt
ctgacccacatgttgatgagtttggctgaaggtcggctcgttctcgctctcgagggaggt
tatgaccttcaggcaacagcagagggcgtcgcagcctgcgtcacagctctgctgggcgga
gcctgtcctctgctggacccgcccactgctccctgtgacagtgccttgcagtccatctct
gagaccatctcagcgctgtacccacactgggcctcgctccaggtcctggctggacccggt
ccggaggagcgtttcatcacagctngcgccaatcacagcagcccaacaccggctaccatc
aatacangtgttgccatgacaacaggtctggtttatgatgagaagatgatggagcatgag
aacctgtgggacaggcatcaccccgaacagcctcagaggatttctaagatcttctccaaa
catcagaagcagggattggtcgcccgttgccatcggataccagcccgcctggcgacagag
gaggagctggccttgtgtcacagcctgcagcacatcgagcagatgaaggcgacggcggag
atgaaaccccgcgaccttcacagactgggaaaccagttcacctccatcttcttcagcaac
cagagcttccagtgcgcccagttagctgctgggagctgcttcaacgcagtggacgccatc
ctgagcggccagctgagtaacggcgtggccatcgtccgccctccgggtcaccacgccgag
agagacgctccctgcggtttctgtctcttcaacaccaccgctctcgccgctcgctacgcc
cagaaaaactcccatgatcctcagctgcgagtgctgatcctcgactgggacgttcaccat
ggcaacgggacacagcacatgtttgaagacgacaacagcgttctgtacgtctctctccat
cgctatgacagcgggacattcttcccattctcggaggacgccgccgccgacagggtgggc
gtggccaagggggcgggctttaacgtgaacgtagcttggagcggcgggcgaatgggtgac
tccgattacctggcagcatttcatcatgttgtcatgccgatcgcggccgagtttaacccc
ggactggttctggtgtcggccgggttcgacgcggcccggggagatccgctgggcggatac
caggtgactcctgagggatacgcccacctcacgcacctgctgatgtcactggctgggggg
cgtgtcctcatcatcctagagggcggttacaacctgacgtccatctctgactccatggcg
atgtgcaccagcgtgttgctaggagacgctcccccatccctaaccacacccttccccccc
catccctgcgccgtggcaaccatcagggaagtcatccgacaacacgccccctactggcgc
tccttgaggattactgttccggagtcggtgcagttggccctccccgccccaaagcatcgt
gggaaacgtagttctctaggcaggaagtcagacaaacggccgccccctgctggacaggag
ggtgctacgatgcagggtgtggagcagctgactcagggattggccagtcttgatatcact
caagccccgccctccccacaggaaccgcccacaatggaggtcaaaggtgatgtggagtct
gagttggagaacagccaatcagcagagagcatgcagactcagagtgttaccacggcagca
gcagagtcagaccgtaaagaaggagcggggtcaggcgaaggggcggaacttacgtcagaa
ggaacctgtggttggtcgacgcctcaggtgtctctggagctgacgtgcagcactgagatg
ggcggagacgctctgtacgtggtggaccctctgccctggtgtcctcacctggatgctgtt
aagcccctccctccctcgggagttgatgtcttccagccttgcggcgactgcggttctgac
gccgagaactggatctgcctcacctgctatcaggtgtgctgcggtcgctacgttaacgag
cacatggtgacgcacggcgccgtgtcagagcaccccgtggtgctcagcttctctgatttg
tccgtttggtgctacctgtgtgagtcctacgtccaccaccaggttctgttcgaggccaag
aacgctgctcacttcgccaagtttggagaggaagttcctccctggagctga
DBGET
integrated database retrieval system
