Poeciliopsis prolifica (blackstripe livebearer): 129360996
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Entry
129360996 CDS
T09758
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129360996 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129360996 (bard1)
04121 Ubiquitin system [BR:
pprl04121
]
129360996 (bard1)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129360996 (bard1)
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129360996 (bard1)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
129360996 (bard1)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
129360996 (bard1)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
129360996 (bard1)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
129360996 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
zf-RING_6
Ank_4
Ank_5
Ank_3
BRCT_2
BRCT
zf-RING_5
zf-RING_10
PTCB-BRCT
zf-RING_UBOX
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
129360996
NCBI-ProteinID:
XP_054887544
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MDNTTSLQTDDWKNTKEAVANFRRLLLCSKCSNLMEEPVCLGMCEHMLCRSCAGPRAGDG
CAVCLSPAWVKDIQINRQLSSIIQLFSDLESLLNPTEQPDCSVAEVSSQGSAALPKHKNF
KIWFSPRSRKVRCKVEKPLEVTAPDRKSKVPTAQCQDLSVFNFTSSSQDSSSSQNESNVN
SKGKKISKKTATTRQVQGCPSTTRRQTKESLKKKRLEAINQKWGITDDQNPSSGPEPSCA
VGTRESCKRVSFLSPSVSTDEAQTEASQVCELSLTNCTINESLPRGEINMLSHQSQHGQS
TSSQMASTNNPNLDDSSKIDTNMSPLESLSKRSKTVERNCSLETTPKRQRASSGQRRKSP
SPFTERLTLASPTSGKKKKHPREGKQHSPSVVALMPSDSRNKSVCSPRSSFGHSSPGSPA
VMKRNHRGETPLHLAAIKGDVDSVQELLDQGADPNLKDNAGWTPLHEACNLGHLAAVKVL
VARGALLNTPGYENDSPLHDAVRNGHAAIVKLLLQLGASQNVLNLHGKRPADYAVSQEML
AIFQEAAEGIQYANSHTSHSPSATISVSSESARRDQTLMLLASKLSSPEQCQLVKLGVLL
GGRIVDTFSGSVSHVVVPEGQMPTTYSTLLGLLAGCWVVKYSWVKACLQAEKWLPEAEHE
AGEGPQRSRINICSLLPPLFDGCFFFLLGSFKGPTKDELAKLLREGGGQLLSRQPKPDSD
VTQTLNAAAYHAEPGSDQTLCTQYIIYDPQGTYKPAVVRRGKVWSAPSTWIINCIAAFRL
LPVPQH
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggacaataccacatcgctacagactgatgactggaagaacacgaaagaggcggttgca
aacttccgtcgactgctgctctgctccaaatgctcaaatttgatggaggagccggtgtgt
ctggggatgtgcgagcatatgctgtgcaggtcttgtgctggcccccgggcaggagacggc
tgcgcagtgtgtctcagccctgcgtgggtgaaggacattcaaatcaacaggcagcttagc
agcatcatacagctcttcagtgacttggagtccctgcttaatcccacagaacaaccagac
tgctctgttgctgaggtcagttcgcaggggtcggctgcactcccaaaacacaagaacttt
aagatctggttcagtcctcgcagtcgaaaggtgcgctgcaaggtggagaagcctttagag
gtcactgctccagacaggaagtccaaagtccctacagctcagtgccaggacctttcagtg
tttaatttcacttcgtcctcccaagactcttcatcttcacaaaatgaaagtaatgtaaac
agtaaaggaaagaaaatatctaagaaaactgctactacaaggcaggttcaagggtgccct
agtacaacacgtagacagactaaagagagtttgaaaaagaagaggctggaggccataaac
cagaagtggggaattacagatgaccaaaatccctcatctggaccagagccatcctgtgct
gtcggaacaagagagtcctgcaaaagggtttctttcttaagcccttctgtatcgactgat
gaggctcagactgaagcctcgcaggtctgtgaactcagtttgaccaactgcacaataaac
gaaagtcttccaagaggggagatcaatatgctgagtcaccaaagccagcatggtcagagc
acatccagtcagatggcgtcaacaaataacccaaatctggatgacagttccaaaatagac
acaaatatgtctcccctggagagtctctccaaaagaagcaaaacagtggagagaaactgc
tcattggaaaccacgccaaaaagacagagggcttcttcaggccaaaggagaaaatcacct
tcacctttcactgagcgtttaactttagcaagccccacaagtggaaagaaaaagaaacac
ccaagagaaggtaaacagcatagtccatctgttgtagccctcatgccttcagacagccgc
aataaatccgtgtgcagtcctcggtcatcttttggccattcaagccctggaagccctgca
gtaatgaagaggaaccacagaggagaaacccctctacatcttgctgcaataaagggagat
gtagattctgtccaagaactgctggatcagggagccgaccccaacctgaaagataacgcc
ggctggacaccgctgcatgaggcatgtaatctgggccacctggcagctgtgaaggttttg
gtcgccaggggagccctgttgaacacacctggctatgaaaatgattctccactccatgat
gctgtgaggaacggacatgcagccattgttaagctgctgctgcagctcggtgcttcccag
aacgttcttaatctacatgggaagcgtcctgcagattatgcagtgagccaggagatgctg
gcgattttccaggaagctgcagaaggaatccaatatgctaattctcatacatctcatagc
ccctcagccactatctctgtgtcgagtgagagtgcgagaagggatcagactttaatgtta
ttggccagcaagctatcatcaccagagcagtgtcagctcgtcaaactgggagtgctactg
ggaggaaggattgttgataccttttctggatcagtgagccatgtcgttgtgccagaagga
caaatgcccaccacctactccaccctcctgggtcttcttgctggctgctgggttgtcaaa
tacagctgggtgaaagcatgtctgcaggcggaaaagtggctgcctgaagctgagcatgaa
gcgggagaaggccctcagcgcagtcgcatcaacatatgtagtttgcttccaccgcttttc
gatggctgcttcttcttccttctcggctcctttaaggggccaacaaaagatgagctcgcc
aagctgttgcgagaaggaggcggccaacttctgagccggcagccaaagccggacagcgac
gttacacagactctgaatgcagcagcctaccatgcagagccaggctctgaccagaccctc
tgcacccagtacatcatctacgacccacagggaacctacaagccggcggttgtcagacga
gggaaagtgtggtctgctccctcaacctggatcattaactgcattgcagccttccgcctt
ctccctgtgcctcagcattaa
DBGET
integrated database retrieval system
