Podospora pseudoanserina: QC764_305080
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Entry
QC764_305080 CDS
T09816
Symbol
HDA1
Name
(RefSeq) Histone deacetylase hda1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ppsa
Podospora pseudoanserina
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppsa01009
]
QC764_305080 (HDA1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsa03019
]
QC764_305080 (HDA1)
04131 Membrane trafficking [BR:
ppsa04131
]
QC764_305080 (HDA1)
03036 Chromosome and associated proteins [BR:
ppsa03036
]
QC764_305080 (HDA1)
Enzymes [BR:
ppsa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
QC764_305080 (HDA1)
Protein phosphatases and associated proteins [BR:
ppsa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
QC764_305080 (HDA1)
Messenger RNA biogenesis [BR:
ppsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
QC764_305080 (HDA1)
Membrane trafficking [BR:
ppsa04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
QC764_305080 (HDA1)
Chromosome and associated proteins [BR:
ppsa03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
QC764_305080 (HDA1)
BRITE hierarchy
Motif
Pfam:
Arb2
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
87966488
NCBI-ProteinID:
XP_062801627
LinkDB
All DBs
Position
3:1760591..1763917
Genome browser
AA seq
824 aa
AA seq
DB search
MGHVAGHCAYHSPISFLLCLAHILKPSALFALGTYLFHLPRHYLCLSSRLVANKSQTNLP
SLQHLRFASSICWPGPCGIMDVDQDVVMDGTADAPSIQSANGYSEPTSKSGGSSLETPNG
HSADSSAEGTASKSGEPGYPESFRRKGILPTGCCYDDRMKLHANADFGPNPHHPEDPSRI
EVIMRIFKKHGLLFTGTDAELIDVINNRPTSYMWRIPAREATEEEIRTVHRVEHFNWVKA
LSTKTTHELRDISAMMDQGRESLYVGSMTYEASLISAGGAIETCKAVVTGTVKNAFAVIR
PPGHHAEYDQPMGFCLFNNVPIAAKVCQKEYPDICRRVMILDWDVHHGNGIQNMFYEDPN
ILYISLHVYKNGDFYPGKPDNPMIPDGGMEQCGAGNGLGKNINIAWHDQGMGDGEYMAAF
QKIVMPIGHEFNPDLVIISAGFDAAAGDELGACFVSPACYAHMTHMLMSLAGGKVAVCLE
GGYNLIAISKSALAVAQTLMGEPPPQMQIPRISKEASKVLAKVQAYQAPYWECMRPGIID
VTEMTKNDSSRLHDVIRSSQKEKLSKYGMLPLYIQRDIIFRSFENQVLVTKGVQSAKKLL
LIVHDPPELHGQPDPLDNSLEPHNSWVSDGVAKYIDWACNNDFGVIDINVPHYITRTDDT
EHFTPRMDEKTLQMHLQELMCYIWDNYLQLYDGADEIYLMGVGNAYLGIKVLLINRNVRN
RIAGIVNFVDGSLRPVKSDVDEDLSSWYKDNSQVYVANDHACWSDPDLTRKVMKRRFGNA
IRSEVNGLAPMMSRHFKDVLRFIAEQARKLHGGETTEDEGNRRG
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacgtagctgggcactgtgcttatcatagccctatatctttcctcctctgccta
gctcatatcctcaagccttctgccttgtttgcccttggcacctatctttttcaccttcct
cgacactacctctgtttatcttcaagactcgtcgctaacaaaagccagacaaacttgcca
agtctacaacaccttcgcttcgcctcttccatttgctggccaggtccttgcggcatcatg
gacgttgaccaagatgttgtgatggatgggaccgcggatgcgccttctatacagtccgcc
aatggctattcagaaccaacgtccaagtcgggagggagctctctggagacaccaaacggc
cacagcgccgacagcagtgccgaagggacagcttccaagagtggcgagcctggctatcct
gaaagtttccgacgaaaagggatcctaccaaccggttgctgttatgatgaccgcatgaag
ctccatgccaacgcggatttcgggccaaaccctcaccacccagaagacccatcgcgtatc
gaggtcattatgaggatcttcaaaaagcacggtctcctgtttacgggaacagatgccgag
ctcatcgatgtcattaacaacagaccaaccagctacatgtggaggattcctgcaagggaa
gcgacagaagaagagatccgtactgttcatagagtcgaacatttcaactgggtcaaggct
ctgtccaccaagaccacgcacgaactccgcgatatctcagccatgatggaccaaggtcgc
gagtccctctatgttggtagtatgacatacgaggcctctctgatctcggccggtggtgcc
atcgaaacctgcaaggctgtcgttaccggcaccgtcaagaatgccttcgctgttatccga
ccaccaggacatcacgccgagtacgaccaacctatgggtttctgtttgttcaacaacgta
ccgattgcggccaaagtctgccagaaggagtaccccgacatttgccgccgcgtcatgatt
ctcgattgggatgtccaccacggcaacggcattcagaacatgttttacgaggatcccaac
attctctacatatctttgcatgtttacaagaacggagacttttacccaggaaagcctgat
aaccccatgattccggatggcgggatggagcaatgcggtgctggaaacgggctcggcaag
aacatcaacatcgcgtggcacgaccagggcatgggcgatggcgagtacatggcggcattc
caaaagattgttatgccaattggccatgagttcaaccccgacctggttatcatctctgcc
ggtttcgacgctgccgccggagatgagctcggcgcttgcttcgtgtcgcctgcctgttac
gctcacatgacacacatgttgatgtctctggcgggcggcaaggttgccgtttgtttggag
ggtggttacaatctgatcgccatctccaaatcggccctggctgtcgctcaaaccctcatg
ggcgaaccacccccgcagatgcagattccaagaatcagcaaggaagccagcaaagtcctg
gccaaggtccaagcttaccaggctccctattgggagtgcatgcggccgggcatcatcgac
gttacagagatgaccaagaacgactcgtctcgcctgcacgacgtgatcagatcatcacag
aaagagaagttatccaagtacggcatgctcccgttgtatatccaacgggatatcatcttt
aggtcatttgagaatcaagtgttggtgacgaagggcgtgcagtccgcgaagaagctgctg
ttgattgtacatgaccctcccgagctgcatgggcagccggatccccttgataactctctc
gagccacacaattcttgggtctctgatggtgtggccaagtacattgactgggcttgcaac
aatgactttggggtgattgatatcaacgtcccccactacattacccgaacagacgacacg
gagcacttcaccccgagaatggacgagaagactctccaaatgcatcttcaagagctgatg
tgttacatctgggacaactacctccagctctacgacggggcagacgagatctacctgatg
ggggtgggtaatgcctacctcgggatcaaggtcctgttgatcaacagaaacgtccgcaac
cgaatcgctggcatagtaaactttgtggacggcagtctccggcctgtcaagtcggacgtg
gacgaggacttgtcgtcatggtacaaggacaactcacaggtctatgttgccaacgaccac
gcttgctggtcggacccggatcttactaggaaggtgatgaagaggcggttcgggaatgcc
atcaggagcgaggtgaatgggttggcgccgatgatgagtaggcattttaaggatgtgctg
cggtttattgctgagcaggcgaggaagcttcacgggggggagacgacggaggatgagggg
aataggagggggtga
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integrated database retrieval system
