Pieris rapae (cabbage white): 111002736
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Entry
111002736 CDS
T05162
Name
(RefSeq) DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
prap
Pieris rapae (cabbage white)
Pathway
prap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111002736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prap03400
]
111002736
Enzymes [BR:
prap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111002736
DNA repair and recombination proteins [BR:
prap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
111002736
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
111002736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
HHH_5
VPS51_Exo84_N
DUF4332
NTP_transf_2
MG3
HHH_2
Cdd1
PIN_12
Motif
Other DBs
NCBI-GeneID:
111002736
NCBI-ProteinID:
XP_045485545
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All DBs
Position
9:4847674..4849956
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AA seq
326 aa
AA seq
DB search
MLINNLNADFCEFLSELAEYEKNISRNIHKYNAYRKAASVLASYSKRIKSGEEAKKLNGI
GDKISKKIDEFLQTGKLRKLENIHNDNKTQAITLLARVSGIGPVKAAELVNSGIMTIEEL
RQHKNKLTQHQLIGLKYFEDFEKKIPRSEIKEVETIMKKVISDLDKEFMVTICGSYRRGK
SESGDIDALVTHTSLRASKDYKKQGELLLNKIINALEVLITETISKGNTKFMGVCRLSPE
HPSRRLDIRLIAHEQYYCAVLYFTGSDVFNKEMRAHALEKGFTLNEYSLRPIGVTGVPGE
PIDLTSEEDIFDYIDYPYKKPEERNL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcaacaatttaaatgcagatttctgtgaattcctatcagaattagcagaatac
gaaaagaatataagccgtaacatccataagtacaatgcttatagaaaagcggctagtgtc
ttagcttcctatagtaaaagaattaaatctggtgaagaagctaagaaattaaatggtatt
ggtgataaaatatctaagaaaatagacgagttcttacaaactggaaaattgaggaaattg
gaaaatatacataacgataacaaaacacaagcaatcactttattagcacgtgtctcaggt
attggaccagtaaaggcggcggaattagttaacagtggaataatgacgatagaagaatta
agacaacataaaaataaactaacccaacatcaactgattggtttgaagtattttgaagac
tttgaaaaaaagataccaagatcagagatcaaagaagtagaaactataatgaagaaagtt
atctctgatctagataaggaatttatggtaacaatatgtggtagttataggcgtggtaaa
tcggaaagtggtgatatcgacgcattagtaactcatacctcactgagggcatcaaaggat
tacaagaaacaaggcgaattacttcttaacaaaatcattaacgctttagaagtactaatc
actgaaactatatcgaaaggaaacacgaaatttatgggtgtatgtagactttctcccgag
catccatccagacgtctagatataaggctcattgcacacgagcagtattattgtgcagtg
ctatattttactgggagcgatgtttttaataaggaaatgcgtgctcatgctttggaaaag
ggatttacacttaatgaatattccttaagacctattggagtgactggtgttccaggtgag
cccatagatctcacatcagaggaagacatatttgactatatcgattacccatataagaag
cccgaagaaaggaatttgtaa
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