Mollisia scopiformis: LY89DRAFT_676386
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Entry
LY89DRAFT_676386 CDS
T04865
Name
(RefSeq) histone deacetylase
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
psco
Mollisia scopiformis
Brite
KEGG Orthology (KO) [BR:
psco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psco01009
]
LY89DRAFT_676386
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psco03019
]
LY89DRAFT_676386
04131 Membrane trafficking [BR:
psco04131
]
LY89DRAFT_676386
03036 Chromosome and associated proteins [BR:
psco03036
]
LY89DRAFT_676386
Enzymes [BR:
psco01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
LY89DRAFT_676386
Protein phosphatases and associated proteins [BR:
psco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
LY89DRAFT_676386
Messenger RNA biogenesis [BR:
psco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
LY89DRAFT_676386
Membrane trafficking [BR:
psco04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
LY89DRAFT_676386
Chromosome and associated proteins [BR:
psco03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
LY89DRAFT_676386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
FAM195
Motif
Other DBs
NCBI-GeneID:
28823308
NCBI-ProteinID:
XP_018063366
JGI:
676386
UniProt:
A0A132B9G6
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MSQDYMDTVIQSNELPVSNGHSNGFLDPRVLNKLDDLDIPDSTDSREDSFESESKLDIAI
PRRAYLPTGCCYDIRMKLHANADFSASPHHPEDPRRIESIMEEFRVAGLIYTDGSTEQLM
EILKESPEKYMYRIPARRATETEICTVHDAAHYDWVQSLSSMTSTQLRQLTADFDMGRKS
LYVGNLTYEAALVSAGGAIETCKAVVTGVVKNAVAVIRPPGHHAEHDESLGFCIFNNVPI
AAKVCMKEFPDLCRKVLILDWDVHHGNGIQNMFYDDPNVLYISLHVYSNGTFYPGQPENE
DLPDGGLDKCGIGRGIGRNVNIGWADQGVGDGEYMTAFQKIVMPIAHEFDPDLVIISAGF
DAAAGDELGGCFVSPACYSHMTHMLMGLANGKVAVCLEGGYNLRAISRSALAVAKTLMGE
PPERIVPPPLNRVSADTINMVKRIQANYWECMRPGVIPSAEIQVRSTERMSDVIRRAQKS
QLYDEHNMIPLKIMRKGLTEQYENQVLVTPDLYKAKKVIMFIHDSPDVLAQPDLHDNKIY
PHNAYVTDELKLYIDWAIQNGFGVVDVNFPKPIYKTNNFGKELDSYIPKPSENLLANQTK
ELLTYIWENWLELLGSVSITLVGVGDANIGIKQLLTANDDVYKKIPSVLSFIDSNLRSVR
SETDPGLSAWYRQHSLLYIMPDHACFSDPIQSRKVAKKSYGTVRAANVEVGESGNPIGRM
LRAHAEASKEWILSRVMDWEAENLQVDPDETEDEDESDITNPGLGIHGGAVDGDIDMAGM
GGIVSSRMPVLS
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaggattatatggacactgtcatacagagtaacgaactcccggtcagcaatggc
cattcaaatggcttccttgaccctcgagttctcaataaattagacgacctcgatatccct
gattccacggactctcgagaagattccttcgaatccgagtcgaagctcgacattgcaata
ccacgcagagcctaccttccaactggctgctgctacgatatccgaatgaagctacatgca
aatgccgacttctctgcaagcccacaccaccccgaagaccctcgacgaatagagtcgatc
atggaggaatttcgagtcgctggtttgatatacaccgatggaagcacagaacagctcatg
gagatacttaaagaatcgccggagaaatatatgtaccgaattcctgcacggagagctacc
gaaacagagatttgcactgttcacgatgcagcacattacgactgggttcaatcgttgagc
agcatgacttcaactcaattgcgccaattgacagctgactttgatatgggtcggaaatct
ctctacgttggcaatcttacatacgaagcagccttggtatcagctggaggagctatcgaa
acctgcaaagccgtcgtcactggagttgtcaagaacgctgtcgcagtcattcgacctcca
gggcatcacgcagagcacgatgagtctctcggcttctgcatcttcaataacgttccgatt
gcggcgaaagtatgcatgaaggagtttcctgatctctgccggaaggtcttgatcctcgat
tgggatgttcatcatggaaatggcatccagaatatgttctacgatgatccaaacgtcctc
tacatttctctccacgtatacagcaatggtacattctatcctggtcagcctgaaaatgag
gatttacccgatggaggccttgataaatgtggcataggaagaggcattggtcgcaatgtc
aatatcggctgggcagatcagggcgttggtgatggtgaatatatgactgctttccaaaag
atcgtgatgccaatcgcacacgagtttgacccagatctggtcataatctccgccggtttc
gatgctgccgctggagatgagcttggaggatgcttcgtttcgcctgcctgctactcacac
atgacacatatgctcatgggcttagcaaatggaaaggttgctgtctgtctcgagggcggt
tataacctgagagctatttcgaggtcagcattagcagtcgccaagacattgatgggagaa
ccacctgagcgaatcgtccctccaccactcaatcgggtctcagcagatactatcaacatg
gtaaagcggatacaggccaactactgggaatgcatgcgaccaggtgtcataccttcagca
gaaatccaagttcgatctacagagagaatgagcgacgttattcggcgagcccagaagagt
caattatacgatgagcataatatgatacccctgaagatcatgcgtaagggcttgacggag
caatacgaaaatcaagtcctagttacaccggatctgtacaaggcaaagaaggttatcatg
ttcatccatgattcacccgatgttctggcacaaccagatctccacgacaacaagatctat
cctcacaatgcctatgtgaccgacgagctcaaattatatatcgattgggccatacaaaac
ggcttcggtgtcgtcgacgtcaattttcccaaacctatctacaaaaccaacaactttggc
aaggaactcgactcctacataccaaaaccttccgaaaaccttttggcgaaccagaccaag
gaactacttacctacatctgggaaaattggttggagctcttgggcagcgtcagcattact
cttgtcggtgtgggtgacgcaaatatcggcatcaaacaattgctcactgcaaatgatgac
gtctacaagaaaattccctcagtcctgtccttcatcgacagcaacctccgcagcgtaaga
tccgaaacagaccccggcctctcagcttggtaccgccaacactccctcctttacataatg
cccgaccacgcctgcttcagcgacccgatacaatcccgtaaagtagccaagaagagttat
ggtaccgtgagagctgccaacgtcgaggttggcgaaagcggtaacccgatcggcagaatg
ctcagagcacatgcagaggcgagcaaggagtggatcttatcaagggtgatggattgggaa
gcagagaatctgcaggtcgatcccgatgagacggaggatgaggacgaaagcgatatcacg
aatccggggctgggcattcatggaggggccgtggatggggatattgatatggcggggatg
gggggaatagttagttcgaggatgccggtcttgagctga
DBGET
integrated database retrieval system